ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart31d02 |
|---|---|
| Clone Library Name | barley_pub |
>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)| Length = 231 Score = 76.3 bits (186), Expect = 4e-14 Identities = 33/49 (67%), Positives = 42/49 (85%) Frame = -2 Query: 483 GEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGIE 337 G FS+ EVAP++AAWA+RCG +SV K L SPEKVYDF+G+LKK+YG+E Sbjct: 183 GGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGVE 231
>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)| (Auxin-regulated protein parC) Length = 221 Score = 57.0 bits (136), Expect = 3e-08 Identities = 25/50 (50%), Positives = 35/50 (70%) Frame = -2 Query: 486 YGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGIE 337 +G FS PK AWAKRC +RESVAKSL KV +F+ +L++++G+E Sbjct: 172 FGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221
>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT107) Length = 221 Score = 57.0 bits (136), Expect = 3e-08 Identities = 25/50 (50%), Positives = 35/50 (70%) Frame = -2 Query: 486 YGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGIE 337 +G FS PK AWAKRC +RESVAKSL KV +F+ +L++++G+E Sbjct: 172 FGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221
>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)| (Auxin-regulated protein parA) (STR246C protein) Length = 220 Score = 48.5 bits (114), Expect = 9e-06 Identities = 22/46 (47%), Positives = 29/46 (63%) Frame = -2 Query: 477 FSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGI 340 FS+ PK+ WAK C E ESV+KSL P K+Y F+ LK + G+ Sbjct: 174 FSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKLGL 219
>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) Length = 219 Score = 48.1 bits (113), Expect = 1e-05 Identities = 22/45 (48%), Positives = 29/45 (64%) Frame = -2 Query: 486 YGEFSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKK 352 YG F + E PK+ AW KRC ERE+V+ +L +KVY I L+K Sbjct: 170 YGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQK 214
>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)| (Auxin-regulated protein MSR-1) Length = 219 Score = 38.9 bits (89), Expect = 0.007 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = -2 Query: 477 FSLAEVAPKIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGI 340 FS+ K+ W + C E E V+KSL P K+YDF+ LK + G+ Sbjct: 174 FSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKLGL 218
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 32.3 bits (72), Expect = 0.69 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = -2 Query: 486 YGEFSLAEVAPKIAAWAKRCGERESV-AKSLYSPEKVYDFIGLLKKRYGIE*ARRRTAMH 310 +GE + + + AAW + + E V LYSP + D +G Sbjct: 1064 FGELAASGPLRRRAAWMHQIPDPEDVKVVVLYSPLQDEDLLG------------------ 1105 Query: 309 AQAGRPAGLPEGSYR*KLWSDL-GGLQCV 226 G PA P GS R LWSDL GGL + Sbjct: 1106 ---GLPASRPGGSRREPLWSDLKGGLSAL 1131
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 32.3 bits (72), Expect = 0.69 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = -2 Query: 486 YGEFSLAEVAPKIAAWAKRCGERESV-AKSLYSPEKVYDFIGLLKKRYGIE*ARRRTAMH 310 +GE + + + AAW + + E V LYSP + D +G Sbjct: 1064 FGELAASGPLRRRAAWMHQIPDPEDVKVVVLYSPLQDEDLLG------------------ 1105 Query: 309 AQAGRPAGLPEGSYR*KLWSDL-GGLQCV 226 G PA P GS R LWSDL GGL + Sbjct: 1106 ---GLPASRPGGSRREPLWSDLKGGLSAL 1131
>CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC 4.6.1.1) (ATP| pyrophosphate-lyase) (Adenylyl cyclase) Length = 1407 Score = 32.0 bits (71), Expect = 0.90 Identities = 13/47 (27%), Positives = 24/47 (51%) Frame = +3 Query: 51 GIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANN 191 G GG + P +++ + HN HP+ L+ P+ NH++ N+ Sbjct: 68 GGGGGGGHINPMHLNLNSITNNHNNHHNHHPNTLSTPHNNNHNNNNH 114
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 31.2 bits (69), Expect = 1.5 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Frame = -2 Query: 483 GEFSLAEVAPKIAAWAKRCGERESV-AKSLYSPEKVYDFIGLLKKRYGIE*ARRRTAMHA 307 GE + + + AAW + + E V LYSP + D +G Sbjct: 1065 GELAASGPLRRRAAWMHQIPDPEDVKVVVLYSPLQDEDLLG------------------- 1105 Query: 306 QAGRPAGLPEGSYR*KLWSDL-GGLQCV 226 G PA P GS R LWSDL GGL + Sbjct: 1106 --GLPASRPGGSRREPLWSDLKGGLSAL 1131
>CNG_ICTPU (P55934) Cyclic nucleotide-gated cation channel| Length = 682 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Frame = +1 Query: 82 HRRPGLTHDTHIEQEST-TRTHTA*PNHILPTTHTRTIYSTNKE 210 H GL D E E THT H P THTRT TN E Sbjct: 636 HTGLGLLSDNEAEGEHAGVPTHTHADIHAQPETHTRTSAETNSE 679
>GPI16_SCHPO (O94380) GPI transamidase component PIG-T homolog precursor| Length = 545 Score = 29.3 bits (64), Expect = 5.8 Identities = 22/74 (29%), Positives = 29/74 (39%) Frame = +3 Query: 45 RNGIAGGNSVLPPPKTRVDT*HTHRAGEHNTHPHCLTQPYTTNHSHANNLFH**RKKYPN 224 RNG G + PP + H E HCL Y+T H ++LFH K P Sbjct: 247 RNGRRKGKTTFQPPSE-----YCH--DEDMDSLHCLMSGYSTEHHTVDDLFH----KVPK 295 Query: 225 ARTAGHPNRSIIFI 266 R S +F+ Sbjct: 296 ERCLLSSTFSDVFV 309
>DHPH_BACBA (Q59224) Phenylalanine dehydrogenase (EC 1.4.1.20) (PheDH)| Length = 380 Score = 29.3 bits (64), Expect = 5.8 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -1 Query: 115 CVCHVSTLVFGGGSTELPPAIPFLYPLRAMNKL 17 C+ V GGG + +P A+ LY ++A NK+ Sbjct: 142 CIVGVPEAYGGGGDSSIPTAMGVLYGIKATNKM 174
>CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17)| Length = 398 Score = 28.9 bits (63), Expect = 7.6 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 287 PAGRPACACMAVRRRAYSMPYLFLSRPMKS*TFSGE*RLLATLSRSPHRLAHAA-ILGAT 463 P RP + VR R + P FLSR + ++ RL L P RLA A + GA Sbjct: 29 PLPRPVFDRVTVRARMAAGPMDFLSRQLPPLLWTARERLAGYLGARPERLAFATNVTGAV 88 Query: 464 S 466 + Sbjct: 89 N 89
>LOLA4_DROME (Q867Z4) Longitudinals lacking protein, isoforms F/I/K/T| Length = 970 Score = 28.9 bits (63), Expect = 7.6 Identities = 21/92 (22%), Positives = 35/92 (38%) Frame = +1 Query: 79 PHRRPGLTHDTHIEQESTTRTHTA*PNHILPTTHTRTIYSTNKERNIQTHALQATQIAP* 258 PH + H HI Q + H + T H + T+++ + Q H Q + P Sbjct: 588 PHTSSTIIHPHHIIQHVSQEPHHQEHHQQHQTIHIEEVPQTSQQHHQQQHHHQLQTVQPT 647 Query: 259 FLSVASFRQAGRPAGLRVHGGPPARLLDAVPL 354 V S A + + G +L D+ P+ Sbjct: 648 HTQVQSIITAHPGQTINLVGLRNVQLADSKPI 679
>AROB_BACLD (Q65I29) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 362 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -2 Query: 453 KIAAWAKRCGERESVAKSLYSPEKVYDFIGLLKKRYGI 340 KIAAW K G ESV + + + +Y + K R GI Sbjct: 290 KIAAWLKNLGYPESVKREVSTEALIYRMMNDKKTRGGI 327 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,409,751 Number of Sequences: 219361 Number of extensions: 1527888 Number of successful extensions: 4267 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4094 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4251 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
