Clone Information

BLAST Search Result

Clone Name	rbart31c09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2...	63	5e-10
2	RAD4_SCHPO (P32372) S-M checkpoint control protein rad4 (Protein...	34	0.25
3	ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-...	33	0.33
4	LBD11_ARATH (Q9SK08) LOB domain protein 11	33	0.33
5	AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor	33	0.43
6	SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3...	33	0.56
7	SWC5_USTMA (Q4P6D5) SWR1-complex protein 5	33	0.56
8	PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9	32	0.73
9	RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subun...	32	0.95
10	MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.1...	32	0.95
11	RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subun...	32	1.2
12	CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel al...	32	1.2
13	PREG_NEUCR (Q06712) Nuc-1 negative regulatory protein preg	32	1.2
14	TAF6_HUMAN (P49848) Transcription initiation factor TFIID subuni...	32	1.2
15	RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subun...	31	1.6
16	HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor (Histid...	31	1.6
17	RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subun...	31	1.6
18	PELL_ERWCH (P0C1A6) Pectate lyase L precursor (EC 4.2.2.2) (Pect...	31	2.1
19	CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) ...	31	2.1
20	CHS2_PARBR (Q92444) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP ...	30	2.8
21	GDF5_HUMAN (P43026) Growth/differentiation factor 5 precursor (G...	30	2.8
22	RS5_BIFLO (P59122) 30S ribosomal protein S5	30	2.8
23	SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precur...	30	2.8
24	TEGU_EHV1B (P28955) Large tegument protein	30	2.8
25	RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subun...	30	3.6
26	RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subun...	30	3.6
27	RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subun...	30	3.6
28	RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subun...	30	3.6
29	NHR7_CAEEL (Q20765) Nuclear hormone receptor family member nhr-7	30	3.6
30	RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subun...	30	3.6
31	MAUR_PARDE (P52685) Mau operon transcriptional activator	30	4.7
32	MAGA4_HUMAN (P43358) Melanoma-associated antigen 4 (MAGE-4 antig...	30	4.7
33	YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon ...	30	4.7
34	TAF9_RAT (Q5BKE0) Transcription initiation factor TFIID subunit ...	30	4.7
35	TAF9_MOUSE (Q8VI33) Transcription initiation factor TFIID subuni...	30	4.7
36	MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac...	30	4.7
37	RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subun...	29	6.2
38	FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	29	6.2
39	RS3_METMP (Q6LXE7) 30S ribosomal protein S3P	29	6.2
40	RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subun...	29	6.2
41	HIS6_RALEJ (Q46WL8) Imidazole glycerol phosphate synthase subuni...	29	8.1
42	FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)	29	8.1
43	VNUA_PRVKA (P33485) Probable nuclear antigen	29	8.1
44	CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor	29	8.1
45	GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4) (Endo...	29	8.1
46	PPOF_LYCES (Q08296) Polyphenol oxidase F, chloroplast precursor ...	29	8.1
47	LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)	29	8.1
48	TAF6_RAT (Q63801) Transcription initiation factor TFIID subunit ...	29	8.1
49	41_CANFA (Q6Q7P4) Protein 4.1 (Band 4.1) (P4.1) (4.1R)	29	8.1
50	CDKA2_MOUSE (Q9CPY4) Cyclin-dependent kinase 2-associated protei...	29	8.1

>ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2.3.1.153)|
           (5AT)
          Length = 469

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 30/93 (32%), Positives = 52/93 (55%)
 Frame = -2

Query: 410 VLAGAEGWFQKILSLVPRRPMSVGGSPRYGVYDTDFGLGRPSKVELVSIDKTPGTVSLAE 231
           VLA A+ W  +   +  +R + + GSP++  Y  DFG G+P+K ++ S+D     + + +
Sbjct: 377 VLADAKTWLSESNGIPSKRFLGITGSPKFDSYGVDFGWGKPAKFDITSVDYAE-LIYVIQ 435

Query: 230 GTGGQHGIEVGVALPEADMARFASCFSDGLHQL 132
               + G+E+GV+LP+  M  FA  F +G   L
Sbjct: 436 SRDFEKGVEIGVSLPKIHMDAFAKIFEEGFCSL 468

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>RAD4_SCHPO (P32372) S-M checkpoint control protein rad4 (Protein cut5) (P74)|
          Length = 648

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +1

Query: 13  HNNIASSLPNILTFHNNNIRGMAILQFSSCTTSTIFFPSHSWCRPSEKHDAKRAMSASGS 192
           HN+   SL ++    NN+IR   ++Q +S +  +  FP  S   P +K D     S +  
Sbjct: 530 HNS--PSLLSVKKRQNNHIRSNTLIQLNSNSKDSTIFPRRSVTVPGDKIDTVWKSSVTKP 587

Query: 193 ATPTS 207
            TPTS
Sbjct: 588 ETPTS 592

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>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein|
           ATHB-4)
          Length = 318

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 175 MSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVS 315
           M  +   T T  P C  V S++ TV    S  T+ T++GRPSP+ ++
Sbjct: 259 MHMTPPTTLTMCPSCERVSSSAATVTAAPSTTTTPTVVGRPSPQRLT 305

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>LBD11_ARATH (Q9SK08) LOB domain protein 11|
          Length = 229

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 22/64 (34%), Positives = 28/64 (43%)
 Frame = +1

Query: 190 SATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTPYRGEPPTDMGRRGTS 369
           S +PTS P  PP P      P VLS   +  +L R         PY   PPTD  +   +
Sbjct: 27  SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPY--FPPTDPAKFTIA 84

Query: 370 ERIF 381
            R+F
Sbjct: 85  HRVF 88

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>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 24/88 (27%), Positives = 36/88 (40%)
 Frame = +1

Query: 106 TSTIFFPSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTL 285
           +ST   PS +   PS    +  + S S S+T TS       PS++ T   + S  +SST 
Sbjct: 187 SSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTS 246

Query: 286 LGRPSPKSVSYTPYRGEPPTDMGRRGTS 369
             + S  + S +       T      TS
Sbjct: 247 TSQSSTSTSSSSTSTSPSSTSTSSSSTS 274

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>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -2

Query: 329 RYGVYDTDFGLGRPSKVELVSIDKTPGTVSLAEGTGGQHGIEVGVALPEADMARF 165
           R G+Y+ DFG G+P  V +    K          T    GIEV  +  E DMA+F
Sbjct: 409 RMGLYEIDFGWGKPIWVTVDPNIKPNKNCFFMNDTKCGEGIEVWASFLEDDMAKF 463

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>SWC5_USTMA (Q4P6D5) SWR1-complex protein 5|
          Length = 376

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 23/65 (35%), Positives = 31/65 (47%)
 Frame = +1

Query: 145 PSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTP 324
           P    DA + +S S  A+PTS     P PSAS + P   S  ++ST      P+    TP
Sbjct: 234 PRSHPDALKYLS-SQIASPTSTTSSAPAPSASASAPLPTSPASTSTSSSPSRPQPARPTP 292

Query: 325 YRGEP 339
            R +P
Sbjct: 293 RRKKP 297

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>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9|
          Length = 728

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
 Frame = +1

Query: 142 RPSEKHDAKRAMSASGSATPTSMPCCPPVPSAS-DTVPGV----LSMDTSSTLLGRPSPK 306
           RP   + ++R   AS    P + P  PP  + + + VP      L+ + S+     P P+
Sbjct: 455 RPYRGNYSRRGSEASAQTPPNAQPNPPPGGAQNYEYVPARQQWNLTTEESNATAPAPGPQ 514

Query: 307 SV-------SYTPYRGEPPTDMGRRGTSE 372
            +       +Y PYR E P+  G R  S+
Sbjct: 515 PLQRNHSYDTYNPYRSETPSAPGSRAQSQ 543

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>RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (Fragment)
          Length = 902

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
 Frame = +1

Query: 10   YHNNIASSLPNILTFHNNNIRGMAILQFSSCTTSTIFFPSHSWCRPSEKHDAKRAMSASG 189
            +  + + S  N   ++ N   G +   F    T +   PS+S   PS    +      S 
Sbjct: 695  FRGDFSPSAMNSPGYNANKSYGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 754

Query: 190  SATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPSPKSVSYTP 324
            S +PTS    P  PS S T P       S S      SP S SY+P
Sbjct: 755  SYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSP 800



 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 803  PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 862

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 863  PSSPSYSP 870



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
           PS+S   PS    +      S S +PTS    P  PS S T P       S       SP
Sbjct: 817 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSY------SP 870

Query: 304 KSVSYTP 324
            S SY+P
Sbjct: 871 SSPSYSP 877



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 796 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 855

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 856 PTSPSYSP 863



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 789 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 848

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 849 PTSPSYSP 856



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 782 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 841

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 842 PTSPSYSP 849

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>MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 5) (ERK-5) (BMK1
           kinase)
          Length = 806

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 15/67 (22%)
 Frame = +1

Query: 199 PTSMPCCPP---VPSASDTVPGVLSMDTSSTLL------------GRPSPKSVSYTPYRG 333
           P S P CPP   VP  +  +P  L    S++LL            G  +P+ + Y P  G
Sbjct: 622 PASQPVCPPPGPVPQPAGPIPAPLQTAPSTSLLASQSLVPPSGLPGSGAPEVLPYFP-SG 680

Query: 334 EPPTDMG 354
            PP D G
Sbjct: 681 PPPPDPG 687

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>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1852

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    + R    S + +PTS    P  P+ S T P       S    G  SP
Sbjct: 1659 PSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSP 1718

Query: 304  KSVSYTP 324
             S  Y+P
Sbjct: 1719 SSPKYSP 1725



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    +      S S +PTS    P  PS S T P       S       SP
Sbjct: 1610 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSY------SP 1663

Query: 304  KSVSYTP 324
             S SY+P
Sbjct: 1664 SSPSYSP 1670

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>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 4)
            (Brain calcium channel I) (BI) (RAT brain class A)
            (RBA-I)
          Length = 2212

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 36/118 (30%), Positives = 44/118 (37%), Gaps = 3/118 (2%)
 Frame = +3

Query: 153  EA*REACHVGLRQRDADLDAVLPAG---ALGKRHRAGRLVDGHQLHLARPAESEVGVVHA 323
            EA R+        RD D     P+    A G+    GR  +  Q   A P E       A
Sbjct: 843  EALRQTARPRESARDPDARRAWPSSPERAPGREGPYGRESEPQQREHAPPREHVPW--DA 900

Query: 324  VPRRAAHGHGPPRHQREDLLEPPLSARQHAVSVQRPDGRADRPCGRGHPVRAEQVARA 497
             P RA  G  P RH    + E     R+H    +  D   DRP  R  P  A + ARA
Sbjct: 901  DPERAKAGDAPRRHTHRPVAEG--EPRRHRARRRPGDEPDDRPERRPRPRDATRPARA 956

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>PREG_NEUCR (Q06712) Nuc-1 negative regulatory protein preg|
          Length = 483

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = +1

Query: 124 PSH--SWCRPSEKHDAKR-AMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGR 294
           PSH  +   P   H+ +  A++++  AT   +P  P V  A    PGV S          
Sbjct: 159 PSHIPNTVGPMASHEEQASALASTSEATAAPIPHGPTVAVAVPPTPGVYS--------AA 210

Query: 295 PSPKSVSYTPYRGEP 339
           P P  +S+TP  G P
Sbjct: 211 PQPHPLSHTPQTGTP 225

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>TAF6_HUMAN (P49848) Transcription initiation factor TFIID subunit 6|
           (Transcription initiation factor TFIID 70 kDa subunit)
           (TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80)
          Length = 677

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 24/79 (30%), Positives = 31/79 (39%)
 Frame = +1

Query: 127 SHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPK 306
           S S   PS +     + SA GS + T+ P    VPS    V  V +  T+        P 
Sbjct: 542 SSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGPG 601

Query: 307 SVSYTPYRGEPPTDMGRRG 363
           SV        PPT  G+ G
Sbjct: 602 SVQKYIVVSLPPTGEGKGG 620

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>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1745

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S    + S
Sbjct: 1662 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYS 1721

Query: 301  PKSVSYTP 324
            P+S SY+P
Sbjct: 1722 PRSPSYSP 1729



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1648 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1707

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1708 PTSPSYSP 1715



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1641 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1700

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1701 PTSPSYSP 1708



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1634 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1693

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1694 PTSPSYSP 1701



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1627 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1687 PTSPSYSP 1694



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1620 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1679

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1680 PTSPSYSP 1687



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1613 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1672

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1673 PTSPSYSP 1680



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1606 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1665

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1666 PTSPSYSP 1673



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1599 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1658

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1659 PTSPSYSP 1666



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1592 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1651

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1652 PTSPSYSP 1659



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1585 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1644

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1645 PTSPSYSP 1652



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1578 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1637

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1638 PTSPSYSP 1645



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1571 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1630

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1631 PTSPSYSP 1638



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1564 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1623

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1624 PTSPSYSP 1631



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1557 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1616

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1617 PTSPSYSP 1624

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>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG) (Fragment)
          Length = 526

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/55 (30%), Positives = 20/55 (36%)
 Frame = +3

Query: 306 VGVVHAVPRRAAHGHGPPRHQREDLLEPPLSARQHAVSVQRPDGRADRPCGRGHP 470
           V ++H  P    H HGPP H       PP     H    + P      P   GHP
Sbjct: 322 VNIIHRPPPHGHHPHGPPPHGHHPHGPPPHGHPPHGPPPRHP---PHGPPPHGHP 373

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>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1840

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 32/105 (30%), Positives = 39/105 (37%)
 Frame = +1

Query: 10   YHNNIASSLPNILTFHNNNIRGMAILQFSSCTTSTIFFPSHSWCRPSEKHDAKRAMSASG 189
            YH  + S  PN L   N  +  M+  QFS       F PS S   P     +      S 
Sbjct: 1503 YHEGMMS--PNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSS---PGYSPSSPGYSPTSP 1557

Query: 190  SATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTP 324
              +PTS    P  P  S T P      T S      SP S +Y+P
Sbjct: 1558 GYSPTSPGYSPTSPGYSPTSP------TYSPSSPGYSPTSPAYSP 1596



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    +      S S +PTS    P  P+ S T PG      S       SP
Sbjct: 1662 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSY------SP 1715

Query: 304  KSVSYTP 324
             S SY P
Sbjct: 1716 TSPSYGP 1722



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S + +PTS    P  PS S T P       S S      S
Sbjct: 1627 PSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686

Query: 301  PKSVSYTPYR-GEPPTDMGRRGTS 369
            P S SY+P      PT  G   TS
Sbjct: 1687 PTSPSYSPTSPAYSPTSPGYSPTS 1710

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>PELL_ERWCH (P0C1A6) Pectate lyase L precursor (EC 4.2.2.2) (Pectate|
           transeliminase)
          Length = 425

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
 Frame = +1

Query: 58  NNNIRGMAILQFSSCTTSTIFFPSHSWCRPSEKHDAKRAMSASGSATPTSMPC------C 219
           NNN  G+ ++  +S     I +   S  +  +KH  +  +S SGSAT  +          
Sbjct: 301 NNNAGGVTVINNTSYKNG-INYGFGSNVKSGQKHYFRNNVSLSGSATVNNADAKSNSWDT 359

Query: 220 PPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTP-YRGEPPTDMGRRGTSE 372
            PV SASD V    S+DTS   + R +  ++  T  +R    + +   GT E
Sbjct: 360 GPVASASDFV----SLDTSLATISRDNDGTLPETALFRLSTNSKLINAGTKE 407

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>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal|
           transduction protein CBL) (Proto-oncogene c-CBL)
           (Casitas B-lineage lymphoma proto-oncogene)
          Length = 913

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +1

Query: 145 PSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTP 324
           P    D   ++ A        +PC P    + D +P V S     + L RP PK    TP
Sbjct: 542 PPPPPDRPYSVGAETRPQRRPLPCTPGDCPSRDKLPPVPSSRPGDSWLSRPIPKVPVATP 601

Query: 325 YRGEP 339
             G+P
Sbjct: 602 NPGDP 606

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>CHS2_PARBR (Q92444) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 2) (Class-II chitin
           synthase 2)
          Length = 1043

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 25/70 (35%), Positives = 33/70 (47%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
           PS   C P ++       SAS S+ PTS P   P  S + T P +L+ DT   L  R   
Sbjct: 31  PSPQRCHPLDQQ------SASTSSLPTSRPSSSPGQSPNIT-PSILTSDTLH-LPARSVS 82

Query: 304 KSVSYTPYRG 333
            +  +TP RG
Sbjct: 83  PTRPWTPSRG 92

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>GDF5_HUMAN (P43026) Growth/differentiation factor 5 precursor (GDF-5)|
           (Cartilage-derived morphogenetic protein 1) (CDMP-1)
           (Radotermin)
          Length = 501

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 333 RAAHGHGPPRHQREDLLEPPLSARQHAVSVQRPDGRADRPCG 458
           + A   GPPR  +E    PP++  ++ +S+ R    ADR  G
Sbjct: 147 KKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGG 188

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>RS5_BIFLO (P59122) 30S ribosomal protein S5|
          Length = 233

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 25/91 (27%), Positives = 35/91 (38%)
 Frame = +3

Query: 195 DADLDAVLPAGALGKRHRAGRLVDGHQLHLARPAESEVGVVHAVPRRAAHGHGPPRHQRE 374
           D  LD V+    + K H+ GR      L +       VGV          G+G  R    
Sbjct: 43  DELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGV----------GYGKSREVPA 92

Query: 375 DLLEPPLSARQHAVSVQRPDGRADRPCGRGH 467
            + +  L A++H  SV R  G    P  +GH
Sbjct: 93  AIAKGQLDAKKHMFSVPRVRGTITHPV-QGH 122

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>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 20/83 (24%), Positives = 38/83 (45%)
 Frame = +1

Query: 88  QFSSCTTSTIFFPSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSM 267
           Q S+ +T+T    S S    S    +  + ++S +++ TS        S  +T       
Sbjct: 210 QESTESTNTPTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSTQETAATTSEG 269

Query: 268 DTSSTLLGRPSPKSVSYTPYRGE 336
            +SS+     SPK+++Y+PY  +
Sbjct: 270 SSSSSAAITSSPKAIAYSPYNDD 292

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>TEGU_EHV1B (P28955) Large tegument protein|
          Length = 3421

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +1

Query: 169  RAMSASGSATPTSMPCCPPVP-SASDTVPGVLSMDTSSTLLGRPSPKSVSYTPYRGEPPT 345
            ++ S + S  P ++P  PP+P S S    G    D+  TL     PK+ S       PPT
Sbjct: 2599 QSTSKAASGPPPTLPPAPPLPQSTSKAASGATQSDSGKTLT-LDVPKTQSKDKVVPVPPT 2657

Query: 346  D 348
            D
Sbjct: 2658 D 2658

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>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RPB1)
          Length = 1970

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    + R    S + TP+S    P  PS S T P       S       SP
Sbjct: 1795 PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSY------SP 1848

Query: 304  KSVSYTP 324
             S  YTP
Sbjct: 1849 SSPEYTP 1855



 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1690 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYS 1749

Query: 301  PKSVSYTP 324
            P S +YTP
Sbjct: 1750 PTSPNYTP 1757



 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    +      S + +PTS    P  PS S T P   S   SS    R +P
Sbjct: 1760 PSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP---SYSPSSP---RYTP 1813

Query: 304  KSVSYTP 324
            +S +YTP
Sbjct: 1814 QSPTYTP 1820



 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1620 PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1679

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1680 PTSPSYSP 1687



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S + TPTS    P  PS S T P       + S      S
Sbjct: 1732 PSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYS 1791

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1792 PTSPSYSP 1799



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1676 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1735

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1736 PTSPSYSP 1743



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1669 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1728

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1729 PTSPSYSP 1736



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1662 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1721

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1722 PTSPSYSP 1729



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1715 PTSPSYSP 1722



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1648 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1707

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1708 PTSPSYSP 1715



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRP-S 300
            PS+S   PS    +      S S +PTS    P  PS S T P       + T      S
Sbjct: 1704 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYS 1763

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1764 PTSPSYSP 1771

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>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RPB1)
          Length = 1970

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    + R    S + TP+S    P  PS S T P       S       SP
Sbjct: 1795 PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSY------SP 1848

Query: 304  KSVSYTP 324
             S  YTP
Sbjct: 1849 SSPEYTP 1855



 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1690 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYS 1749

Query: 301  PKSVSYTP 324
            P S +YTP
Sbjct: 1750 PTSPNYTP 1757



 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    +      S + +PTS    P  PS S T P   S   SS    R +P
Sbjct: 1760 PSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP---SYSPSSP---RYTP 1813

Query: 304  KSVSYTP 324
            +S +YTP
Sbjct: 1814 QSPTYTP 1820



 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1620 PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1679

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1680 PTSPSYSP 1687



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S + TPTS    P  PS S T P       + S      S
Sbjct: 1732 PSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYS 1791

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1792 PTSPSYSP 1799



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1676 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1735

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1736 PTSPSYSP 1743



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1669 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1728

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1729 PTSPSYSP 1736



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1662 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1721

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1722 PTSPSYSP 1729



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1715 PTSPSYSP 1722



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1648 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1707

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1708 PTSPSYSP 1715



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRP-S 300
            PS+S   PS    +      S S +PTS    P  PS S T P       + T      S
Sbjct: 1704 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYS 1763

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1764 PTSPSYSP 1771

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>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1853

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S    R S
Sbjct: 1621 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYS 1680

Query: 301  PKSVSYTP 324
            P S +Y+P
Sbjct: 1681 PTSPTYSP 1688



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            P++S   PS    + +    S   +P+S    P  P+ + T P   S    S      SP
Sbjct: 1729 PTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSP 1788

Query: 304  KSVSYTP 324
             S SYTP
Sbjct: 1789 TSPSYTP 1795



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    +      S S +PTS    P  PS S T P       S       SP
Sbjct: 1614 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY------SP 1667

Query: 304  KSVSYTP 324
             S SY+P
Sbjct: 1668 TSPSYSP 1674

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>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1752

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +    + S S +PTS    P  PS S T P       S S      S
Sbjct: 1590 PSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1649

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1650 PTSPSYSP 1657



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1740

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1741 PTSPSYSP 1748



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1674 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1733

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1734 PTSPSYSP 1741



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1667 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1726

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1727 PTSPSYSP 1734



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1660 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1719

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1720 PTSPSYSP 1727



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1653 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1712

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1713 PTSPSYSP 1720



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1646 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1705

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1706 PTSPSYSP 1713



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1698

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1699 PTSPSYSP 1706



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1632 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1691

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1692 PTSPSYSP 1699



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1625 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1684

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1685 PTSPSYSP 1692



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1677

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1678 PTSPSYSP 1685

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>NHR7_CAEEL (Q20765) Nuclear hormone receptor family member nhr-7|
          Length = 536

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = +1

Query: 202 TSMPCCPPVPSASDTVP--GVLSMDTSSTLLGRPSPKSVSYTPYRGEPPT 345
           +S+   PPVP  SDTVP         S   +  P P    YT Y   P T
Sbjct: 401 SSLSSVPPVPPPSDTVPLFHFSPPSLSPCQISAPPPPQQQYTDYSQMPST 450

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>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RPB1) (Fragment)
          Length = 467

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
           PS+S   PS    + R    S + TP+S    P  PS S T P       S       SP
Sbjct: 292 PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSY------SP 345

Query: 304 KSVSYTP 324
            S  YTP
Sbjct: 346 SSPEYTP 352



 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 187 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYS 246

Query: 301 PKSVSYTP 324
           P S +YTP
Sbjct: 247 PTSPNYTP 254



 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
           PS+S   PS    +      S + +PTS    P  PS S T P   S   SS    R +P
Sbjct: 257 PSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP---SYSPSSP---RYTP 310

Query: 304 KSVSYTP 324
           +S +YTP
Sbjct: 311 QSPTYTP 317



 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 117 PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 176

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 177 PTSPSYSP 184



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S + TPTS    P  PS S T P       + S      S
Sbjct: 229 PSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYS 288

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 289 PTSPSYSP 296



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 173 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 232

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 233 PTSPSYSP 240



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 166 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 225

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 226 PTSPSYSP 233



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 159 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 218

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 219 PTSPSYSP 226



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 152 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 211

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 212 PTSPSYSP 219



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
           PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 145 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 204

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 205 PTSPSYSP 212



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124 PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRP-S 300
           PS+S   PS    +      S S +PTS    P  PS S T P       + T      S
Sbjct: 201 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYS 260

Query: 301 PKSVSYTP 324
           P S SY+P
Sbjct: 261 PTSPSYSP 268

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>MAUR_PARDE (P52685) Mau operon transcriptional activator|
          Length = 283

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = +3

Query: 201 DLDAVLPAGALGKRHRAGRLVDGHQLHLARPAESEVGVVHAVPRRAAHGHGPPRHQREDL 380
           DL  V      G  +RA ++++  +  +AR      G +  V  +A  G   P  Q   L
Sbjct: 5   DLRVVAAINRCGSFNRAAKMLNVEETTIARRLARLEGSLGCVLFQAVDGQRRPTEQCRAL 64

Query: 381 LEPPLSARQHAVSVQRPDGRADRP 452
           L+P +   Q A ++     R +RP
Sbjct: 65  LQPLVLMEQAAEAITLQLERQERP 88

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>MAGA4_HUMAN (P43358) Melanoma-associated antigen 4 (MAGE-4 antigen) (MAGE-X2)|
           (MAGE-41)
          Length = 317

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +1

Query: 139 CRPSEKHDAKR-AMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRP-SPKSV 312
           C+P E  +A+  A+   G+  PT+      V S+S  VPG L    ++   G P SP+  
Sbjct: 10  CKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESAGPPQSPQGA 69

Query: 313 SYTP 324
           S  P
Sbjct: 70  SALP 73

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>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556|
          Length = 395

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/72 (33%), Positives = 32/72 (44%)
 Frame = +3

Query: 246 RAGRLVDGHQLHLARPAESEVGVVHAVPRRAAHGHGPPRHQREDLLEPPLSARQHAVSVQ 425
           RA  L  G QL   +  +    VVH  PRR  HG G  R Q   +  P   A+Q  ++V 
Sbjct: 158 RALALRPGQQLRRDQHLQQVQRVVHR-PRREVHGGGQQRRQAASVGVP---AQQRRLAVH 213

Query: 426 RPDGRADRPCGR 461
              G+  +P  R
Sbjct: 214 PVPGQLRQPARR 225

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>TAF9_RAT (Q5BKE0) Transcription initiation factor TFIID subunit 9|
           (Transcription initiation factor TFIID 31 kDa subunit)
           (TAFII-31) (TAFII-32) (TAFII32)
          Length = 264

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 223 PVPSASDTVP----GVLSMDTSSTLLGRPSPKSVSYTPYRGEPPTDMGRRGT 366
           P P+   TVP    G +S   S+  LG P+P+++S +   G P +  G+R T
Sbjct: 137 PTPAGRITVPRLSVGSVSSRPSTPTLGTPTPQAMSVSTKVGTPMSLTGQRFT 188

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>TAF9_MOUSE (Q8VI33) Transcription initiation factor TFIID subunit 9|
           (Transcription initiation factor TFIID 31 kDa subunit)
           (TAFII-31) (TAFII-32) (TAFII32)
          Length = 264

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +1

Query: 223 PVPSASDTVP----GVLSMDTSSTLLGRPSPKSVSYTPYRGEPPTDMGRRGT 366
           P P+   TVP    G +S   S+  LG P+P+++S +   G P +  G+R T
Sbjct: 137 PAPAGRITVPRLSVGSVSSRPSTPTLGTPTPQTMSVSTKVGTPMSLTGQRFT 188

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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 21/77 (27%), Positives = 28/77 (36%)
 Frame = +1

Query: 94   SSCTTSTIFFPSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDT 273
            +S T      P  +W        A    S   +ATP+S P   P P    T P      T
Sbjct: 4176 TSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPPKVL-TSPATTPTAT 4234

Query: 274  SSTLLGRPSPKSVSYTP 324
            SS      SP++ +  P
Sbjct: 4235 SSKATSSSSPRTATTLP 4251

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>RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1) (B220)
          Length = 1733

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1617 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYS 1676

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1677 PTSPSYSP 1684



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1603 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYS 1662

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1663 PTSPSYSP 1670



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1589 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1648

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1649 PTSPSYSP 1656



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1582 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1641

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1642 PTSPSYSP 1649



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1575 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1634

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1635 PTSPSYSP 1642



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1568 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1627

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1628 PTSPSYSP 1635



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1561 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1620

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1621 PTSPSYSP 1628



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 23/71 (32%), Positives = 29/71 (40%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    +      S S +PTS    P  PS S T PG              SP
Sbjct: 1666 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGY-------------SP 1712

Query: 304  KSVSYTPYRGE 336
             S +Y+P + E
Sbjct: 1713 GSPAYSPKQDE 1723



 Score = 28.9 bits (63), Expect = 8.1
 Identities = 23/67 (34%), Positives = 27/67 (40%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSP 303
            PS+S   PS    +      S S +PTS    P  PS S T P       S       SP
Sbjct: 1631 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSY------SP 1684

Query: 304  KSVSYTP 324
             S SY+P
Sbjct: 1685 TSPSYSP 1691

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>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (Protein archipelago)
          Length = 1326

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +1

Query: 160 DAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTPYRGEP 339
           + ++ ++   ++TP S     P    S T    L+  T  + LGR +P+SV   P R  P
Sbjct: 785 NCRKRIAYDFASTPRSSQHLGPTAVLSVTPSSHLTSSTPGSALGRRTPRSV---PSRDNP 841

Query: 340 PTDM 351
           P ++
Sbjct: 842 PPEL 845

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>RS3_METMP (Q6LXE7) 30S ribosomal protein S3P|
          Length = 211

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 210 AVLPAGAL-GKRHRAGRLVDGHQLHLARPAESEVGVVHAVPR 332
           A++ +G L G+R R  + +DG+  H   PAE+ V   H + +
Sbjct: 128 AIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAK 169

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>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1)
          Length = 1599

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1499 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1558

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1559 PTSPSYSP 1566



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1492 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1551

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1552 PTSPSYSP 1559



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1485 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1544

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1545 PTSPSYSP 1552



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1478 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1537

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1538 PTSPSYSP 1545



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  PSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTS-STLLGRPS 300
            PS+S   PS    +      S S +PTS    P  PS S T P       S S      S
Sbjct: 1471 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1530

Query: 301  PKSVSYTP 324
            P S SY+P
Sbjct: 1531 PTSPSYSP 1538

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>HIS6_RALEJ (Q46WL8) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 256

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -2

Query: 263 DKTPGTVSLAEGTGGQHGIEVGVALPEADMARFASCFSDGLHQL*EGK 120
           D  P  V  + G GG   +  G+ L  AD    AS F  G H + E K
Sbjct: 197 DAVPVPVIASGGVGGLQDLADGIRLGHADAVLAASIFHYGQHTVGEAK 244

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>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)|
          Length = 1094

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
 Frame = +1

Query: 175 MSASGSATPTSMPCCPPVPSASDT-----VPGVLSMDTSSTLLGRPSPKSVSYTPYRGEP 339
           + +   A P++ P  PP+P  ++      +PG L        LG   P      P  G P
Sbjct: 551 LQSQQEAPPSAPPLAPPLPGCAEPPPAPPLPGDLPPPPPPPPLGTDGPVPPPPPPPPGGP 610

Query: 340 PTDMGRRG 363
           P  +G +G
Sbjct: 611 PDILGGQG 618

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 33/101 (32%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
 Frame = +3

Query: 180 GLRQRDADLDAVLPAGALGKRHRAGRLVDGHQLHLARPAESEVGVVHAVPR-RAAHGHGP 356
           G  Q DAD+D V+P G    R   G ++DG Q     P  +E       PR    HG G 
Sbjct: 654 GRVQADADVDVVVPHG----RAVRGPVLDGVQHDEPAPRRAE-------PRAEVLHGAGE 702

Query: 357 PRHQREDLLEPPLSARQHAVSVQRPDGRADRPC-GRGHPVR 476
                    E P   +QH + V+  D  A  P  G G  VR
Sbjct: 703 --------AEVPRREQQHPLGVEAADVGAPGPVPGPGVRVR 735

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>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor|
          Length = 1496

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +1

Query: 220 PPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTPYRGEPPTDMGRRGT 366
           PP P  S  +PG +  D      G P PK  + +P    PP   G  G+
Sbjct: 409 PPGPVGSPGLPGAIGTD------GTPGPKGPTGSPGTSGPPGSAGPPGS 451

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>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase A) (Cellulase A)
          Length = 1742

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +1

Query: 178 SASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTPYRGEPPTDMGR 357
           +AS + TPT  P   P P+ + TV    ++  + T    P+P   S TP     PT +  
Sbjct: 646 TASVTPTPTPTPTATPTPTPTPTVTPTPTVTATPT----PTPTPTS-TPTVTPTPTPVST 700

Query: 358 RGTSERI 378
             TS +I
Sbjct: 701 PATSGQI 707

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>PPOF_LYCES (Q08296) Polyphenol oxidase F, chloroplast precursor (EC 1.10.3.1)|
           (PPO) (Catechol oxidase)
          Length = 585

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 196 TPTSMPCCPPVPSASDTVP 252
           T  S  CCPPVP   D+VP
Sbjct: 107 TEVSYSCCPPVPDDIDSVP 125

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>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 112 TIFFPSHSWCRPSEKHDAKRAMSASGSATPTSMPCCPPVP 231
           T+ F ++SW  P++ +  +R   A+ +  P+ MP  P +P
Sbjct: 142 TVVFVANSWIYPADNYQYERVFFANDTYLPSKMP-APLIP 180

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>TAF6_RAT (Q63801) Transcription initiation factor TFIID subunit 6|
           (Transcription initiation factor TFIID 70 kDa subunit)
           (TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80) (p80)
          Length = 678

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +1

Query: 178 SASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYTPYRGEPPTDMGR 357
           SA GS + T+ P    VPS    V  V +  T+        P SV        PPT  G+
Sbjct: 559 SAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPAGPGSVQKYIVVSLPPTGEGK 618

Query: 358 RG 363
            G
Sbjct: 619 GG 620

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>41_CANFA (Q6Q7P4) Protein 4.1 (Band 4.1) (P4.1) (4.1R)|
          Length = 810

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 20/77 (25%), Positives = 29/77 (37%)
 Frame = +1

Query: 142 RPSEKHDAKRAMSASGSATPTSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSYT 321
           R S   D   A+ +  S  PTS P       A  TVPG        T++ +   ++V   
Sbjct: 539 RASRSLDGAAAVDSDRSPRPTSAPAIAQSQDAEGTVPGA---PVKKTVVSKAQKETVKDE 595

Query: 322 PYRGEPPTDMGRRGTSE 372
             + E P D      +E
Sbjct: 596 EKKEEGPPDQAEPEPTE 612

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>CDKA2_MOUSE (Q9CPY4) Cyclin-dependent kinase 2-associated protein 2|
           (CDK2-associated protein 2) (DOC-1-related protein)
           (DOC-1R)
          Length = 127

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
 Frame = +1

Query: 148 SEKHDAKRAMSASGSATP---TSMPCCPPVPSASDTVPGVLSMDTSSTLLGRPSPKSVSY 318
           S K  A    S  GS+TP   T +P    VPS S +VPG  +      L     P S+ Y
Sbjct: 2   SYKPIAPAPSSTPGSSTPGPGTPVPTAGSVPSPSGSVPGAAA--PFRPLFNDFGPPSMGY 59

Query: 319 TPYRGEPPTDMGRRGT 366
                +PP   G + T
Sbjct: 60  VQAM-KPPGSQGSQST 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.129    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,216,196
Number of Sequences: 219361
Number of extensions: 1310339
Number of successful extensions: 6199
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 5619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6106
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result