ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart31c08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475102.1| Triticum aestivum tat binding protein mRNA, partial cds Length = 564 Score = 505 bits (255), Expect = e-140 Identities = 267/271 (98%) Strand = Plus / Minus Query: 262 aaagttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctct 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 aaagttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctct 502 Query: 322 tgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaa 381 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 501 tgcttcttcggtcggatgagggaactcaatctttctgtccaggcgaccagaacggagtaa 442 Query: 382 agcaggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcact 441 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 agcaggatcgagaatatctgcacgattggttgcagctatcacctttatcctctcatcact 382 Query: 442 gctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 gctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 322 Query: 502 actaacttcactgtcaaaacgctttgttcca 532 ||| ||||||||||||||||||||||||||| Sbjct: 321 actcacttcactgtcaaaacgctttgttcca 291
>dbj|AK103936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G01, full insert sequence Length = 1450 Score = 426 bits (215), Expect = e-116 Identities = 389/447 (87%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1344 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1285 Query: 146 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 205 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1284 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1225 Query: 206 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 265 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1224 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1165 Query: 266 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 325 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1164 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 1105 Query: 326 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 385 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1104 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1045 Query: 386 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 445 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1044 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 985 Query: 446 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 505 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 984 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 925 Query: 506 acttcactgtcaaaacgctttgttcca 532 |||||||| |||||||||||||||||| Sbjct: 924 acttcactatcaaaacgctttgttcca 898
>dbj|AK067051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093O11, full insert sequence Length = 1397 Score = 426 bits (215), Expect = e-116 Identities = 389/447 (87%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1231 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1172 Query: 146 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 205 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1171 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1112 Query: 206 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 265 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1111 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1052 Query: 266 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 325 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1051 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 992 Query: 326 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 385 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 991 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 932 Query: 386 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 445 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 931 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 872 Query: 446 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 505 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 871 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 812 Query: 506 acttcactgtcaaaacgctttgttcca 532 |||||||| |||||||||||||||||| Sbjct: 811 acttcactatcaaaacgctttgttcca 785
>dbj|AK062185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-E03, full insert sequence Length = 1497 Score = 426 bits (215), Expect = e-116 Identities = 389/447 (87%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1331 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1272 Query: 146 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 205 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1271 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1212 Query: 206 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 265 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1211 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1152 Query: 266 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 325 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1151 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattccagctcgtgct 1092 Query: 326 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 385 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1091 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1032 Query: 386 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 445 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1031 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 972 Query: 446 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 505 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 971 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 912 Query: 506 acttcactgtcaaaacgctttgttcca 532 |||||||| |||||||||||||||||| Sbjct: 911 acttcactatcaaaacgctttgttcca 885
>dbj|D17788.1|RICHTNP1 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat binding protein, complete cds Length = 1473 Score = 426 bits (215), Expect = e-116 Identities = 389/447 (87%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1314 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1255 Query: 146 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 205 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1254 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1195 Query: 206 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 265 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1194 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1135 Query: 266 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 325 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1134 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 1075 Query: 326 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 385 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1074 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1015 Query: 386 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 445 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1014 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 955 Query: 446 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 505 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 954 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 895 Query: 506 acttcactgtcaaaacgctttgttcca 532 |||||||| |||||||||||||||||| Sbjct: 894 acttcactatcaaaacgctttgttcca 868
>dbj|AB037155.1| Oryza sativa (japonica cultivar-group) OsRPT5a mRNA for 26S proteasome regulatory particle triple-A ATPase subunit5a, complete cds Length = 1510 Score = 426 bits (215), Expect = e-116 Identities = 389/447 (87%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1315 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1256 Query: 146 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 205 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1255 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1196 Query: 206 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 265 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1195 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1136 Query: 266 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 325 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1135 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 1076 Query: 326 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 385 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1075 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1016 Query: 386 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 445 ||||||||||| || || ||||| |||||||||||||||||||||||||| ||||| || Sbjct: 1015 ggatcaagaatgtccgcgcgattagttgcagctatcacctttatcctctcgtcactactg 956 Query: 446 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 505 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 955 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 896 Query: 506 acttcactgtcaaaacgctttgttcca 532 |||||||| |||||||||||||||||| Sbjct: 895 acttcactatcaaaacgctttgttcca 869
>dbj|AK101474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040L18, full insert sequence Length = 1520 Score = 418 bits (211), Expect = e-114 Identities = 388/447 (86%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 1358 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 1299 Query: 146 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 205 ||||| || || |||||||||||||||| | ||||| ||||||||||| ||||| ||| Sbjct: 1298 aaatcctcgtgtgtcacctctgtagcatctcggcgtagggcaagcatgcctgcttctaca 1239 Query: 206 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 265 ||||| |||||||| |||||||||||||| || || || || || |||| ||| |||||| Sbjct: 1238 caaacggccttcagttgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaag 1179 Query: 266 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 325 ||||||||||| | ||| ||||| |||||||| || ||||||||||| | ||||| |||| Sbjct: 1178 ttgacatcagggtttacattcatttttcttgaatggatttgcaaaattctagctcgtgct 1119 Query: 326 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 385 ||||| | ||||||||||||||||| ||||||||||| | |||||| | | |||||| Sbjct: 1118 tcttcggatggatgagggaactcaatttttcggtccagcctaccagacctcatcaaagca 1059 Query: 386 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 445 ||||||||||| || || ||| | |||||||||||||||||||||||||| ||||| || Sbjct: 1058 ggatcaagaatgtccgcgcgactagttgcagctatcacctttatcctctcgtcactactg 999 Query: 446 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 505 |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| Sbjct: 998 aatccatctagctgattcagcaactccaacattgtgcgctgcacttctctgtcaccacta 939 Query: 506 acttcactgtcaaaacgctttgttcca 532 |||||||| |||||||||||||||||| Sbjct: 938 acttcactatcaaaacgctttgttcca 912
>gb|BT016782.1| Zea mays clone Contig615 mRNA sequence Length = 1660 Score = 412 bits (208), Expect = e-112 Identities = 385/444 (86%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| |||||||||||||||||||||||||| ||||||||||| || || || |||||| Sbjct: 1439 gcgtagtaattcaagctggacttcttctttgcctgcacttggatgatcccctcgttgaaa 1380 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || || ||| | |||||||||||||| | |||||||| ||||||||||| || || ||| Sbjct: 1379 tcctcgtgggtaacctctgtagcatctcggcgtagagcgagcatgccagcctctacgcaa 1320 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 |||||||| ||||| || |||||||||||||| |||||||| |||| ||| ||||||||| Sbjct: 1319 acagcctttagctgagcgccattgaaatcatcggttgaacgcgccaactcttcaaagttg 1260 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 ||||| |||| || ||||| || || ||||| || |||| || | |||||||||||| Sbjct: 1259 acatctggattcacattcattttcctcgagtggatctgcaggattctagctcttgcttcc 1200 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || | |||||||||||||||||||| |||||||| |||||||| | | | ||||||| Sbjct: 1199 tctgatggatgagggaactcaatcttacggtccagacgaccagatctcatcagagcagga 1140 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1139 tcaagaatatcagcacgatttgttgcagctatcacctttatcctctcatcgctgctaaat 1080 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 ||||| |||||||||||||| |||||||| || | |||||||||||| || ||||||||| Sbjct: 1079 ccatcaagctgattcagcaattccaacattgtcctttgcacttctctatcgccactaact 1020 Query: 509 tcactgtcaaaacgctttgttcca 532 |||||||||||||||||||||||| Sbjct: 1019 tcactgtcaaaacgctttgttcca 996
>gb|AY105910.1| Zea mays PCO106969 mRNA sequence Length = 1671 Score = 412 bits (208), Expect = e-112 Identities = 385/444 (86%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| |||||||||||||||||||||||||| ||||||||||| || || || |||||| Sbjct: 1397 gcgtagtaattcaagctggacttcttctttgcctgcacttggatgatcccctcgttgaaa 1338 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || || ||| | |||||||||||||| | |||||||| ||||||||||| || || ||| Sbjct: 1337 tcctcgtgggtaacctctgtagcatctcggcgtagagcgagcatgccagcctctacgcaa 1278 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 |||||||| ||||| || |||||||||||||| |||||||| |||| ||| ||||||||| Sbjct: 1277 acagcctttagctgagcgccattgaaatcatcggttgaacgcgccaactcttcaaagttg 1218 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 ||||| |||| || ||||| || || ||||| || |||| || | |||||||||||| Sbjct: 1217 acatctggattcacattcattttcctcgagtggatctgcaggattctagctcttgcttcc 1158 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || | |||||||||||||||||||| |||||||| |||||||| | | | ||||||| Sbjct: 1157 tctgatggatgagggaactcaatcttccggtccagacgaccagatctcatcagagcagga 1098 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1097 tcaagaatatcagcacgatttgttgcagctatcacctttatcctctcatcgctgctaaat 1038 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 ||||| ||||| |||||||| |||||||| || | |||||||||||| |||||||||||| Sbjct: 1037 ccatcaagctggttcagcaattccaacattgtcctttgcacttctctatcaccactaact 978 Query: 509 tcactgtcaaaacgctttgttcca 532 |||||||||||||||||||||||| Sbjct: 977 tcactgtcaaaacgctttgttcca 954
>dbj|AB071016.1| Oryza sativa (japonica cultivar-group) OsRPT5b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit5b, partial cds Length = 758 Score = 353 bits (178), Expect = 4e-94 Identities = 370/434 (85%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| | ||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 584 taagcgtaataatttaggctagacttcttcttagcctgcacctgtattatgccttcgttg 525 Query: 146 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 205 || || ||||| |||||||||||||||| | ||| || |||||||| |||||||| ||| Sbjct: 524 aagtcctcatgagtcacctctgtagcatctcgccgcagtgcaagcataccagcttcgaca 465 Query: 206 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 265 |||||||| ||||| || || |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 464 caaacagctttcagttgcgctccattgaagtcatctgttgagcgagccagctcttcaaaa 405 Query: 266 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 325 || ||||| || | ||| ||||| |||||||||||||||||||| || | |||||||||| Sbjct: 404 ttcacatctgggtttacattcatttttcttgagtgaatttgcaagattctagctcttgct 345 Query: 326 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 385 ||||| | |||||||| ||||||||||||||||||| |||||||| || | |||||| Sbjct: 344 tcttcagatggatgaggaaactcaatctttcggtccaaacgaccagatcgcatcaaagca 285 Query: 386 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 445 ||||||||||| || |||||||| ||||| ||||| |||||||||| ||| ||||| ||| Sbjct: 284 ggatcaagaatgtcagcacgattcgttgccgctatgacctttatccgctcgtcactacta 225 Query: 446 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 505 |||||||| || || |||||||| ||||||||||| | || |||||||||||||||||| Sbjct: 224 aatccatcgagttggttcagcaattccaacatagtcctctgaacttctctgtcaccacta 165 Query: 506 acttcactgtcaaa 519 || ||||||||||| Sbjct: 164 acctcactgtcaaa 151
>dbj|AK065612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026E01, full insert sequence Length = 1571 Score = 345 bits (174), Expect = 9e-92 Identities = 369/434 (85%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| | ||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 1378 taagcgtaataatttaggctagacttcttcttagcctgcacctgtattatgccttcgttg 1319 Query: 146 aaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccaca 205 || || ||||| |||||||||||||||| | ||| || |||||||| |||||||| ||| Sbjct: 1318 aagtcctcatgagtcacctctgtagcatctcgccgcagtgcaagcataccagcttcgaca 1259 Query: 206 caaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaag 265 |||||||| |||| || || |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1258 caaacagctctcagttgcgctccattgaagtcatctgttgagcgagccagctcttcaaaa 1199 Query: 266 ttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgct 325 || ||||| || | ||| ||||| |||||||||||||||||||| || | |||||||||| Sbjct: 1198 ttcacatctgggtttacattcatttttcttgagtgaatttgcaagattctagctcttgct 1139 Query: 326 tcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagca 385 ||||| | |||||||| ||||||||||||||||||| |||||||| || | |||||| Sbjct: 1138 tcttcagatggatgaggaaactcaatctttcggtccaaacgaccagatcgcatcaaagca 1079 Query: 386 ggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgcta 445 ||||||||||| || |||||||| ||||| ||||| |||||||||| ||| ||||| ||| Sbjct: 1078 ggatcaagaatgtcagcacgattcgttgccgctatgacctttatccgctcgtcactacta 1019 Query: 446 aatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccacta 505 |||||||| || || |||||||| ||||||||||| | || |||||||||||||||||| Sbjct: 1018 aatccatcgagttggttcagcaattccaacatagtcctctgaacttctctgtcaccacta 959 Query: 506 acttcactgtcaaa 519 || ||||||||||| Sbjct: 958 acctcactgtcaaa 945
>gb|AY112136.1| Zea mays CL34715_1 mRNA sequence Length = 730 Score = 274 bits (138), Expect = 3e-70 Identities = 324/386 (83%) Strand = Plus / Plus Query: 137 ccttcattgaaatcttcatggatcacctctgtagcatccctccgtagagcaagcatgcca 196 |||||||||||||| || | | |||||||||||||||| |||||| |||||||| ||| Sbjct: 229 ccttcattgaaatcctcgggagttacctctgtagcatcccgccgtagggcaagcatacca 288 Query: 197 gcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagc 256 ||||| |||||||| ||||| |||||||| || ||||| ||||||||||| ||||||| Sbjct: 289 gcttctacacaaactgcctttagctgtgctccgttgaagtcatcagttgagcgagccaat 348 Query: 257 tcctcaaagttgacatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccga 316 || ||||||||||||||||||| ||| ||||| || ||||| || |||||||| || | | Sbjct: 349 tcttcaaagttgacatcaggatttacattcattttccttgaatggatttgcaagattcta 408 Query: 317 gctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacgg 376 |||||||||||||| | || ||||||||||||||||||||||||| || ||||| || Sbjct: 409 gctcttgcttcttcggatgggtgagggaactcaatctttcggtccaaccgtccagatcgc 468 Query: 377 agtaaagcaggatcaagaatatctgcacgattggttgcagctatcacctttatcctctca 436 | | |||||| ||||| || || ||||| || ||||||||||| |||||||| |||||| Sbjct: 469 atcagagcagggtcaaggatgtcagcacggttagttgcagctatgacctttattctctca 528 Query: 437 tcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctctg 496 || ||||| |||||||| || ||||||| || |||||||| || || || |||||||| Sbjct: 529 tcgctgctgaatccatccagttgattcaataattccaacattgtccgctgaacttctcta 588 Query: 497 tcaccactaacttcactgtcaaaacg 522 ||||| ||||||||||| |||||||| Sbjct: 589 tcaccgctaacttcactatcaaaacg 614
>ref|NM_111426.2| Arabidopsis thaliana RPT5A; ATPase/ calmodulin binding AT3G05530 (RPT5A) mRNA, complete cds Length = 1621 Score = 214 bits (108), Expect = 2e-52 Identities = 357/440 (81%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1379 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1320 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1319 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1260 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1259 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1200 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1199 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1140 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1139 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1080 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1079 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 1020 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 1019 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 960 Query: 509 tcactgtcaaaacgctttgt 528 |||||||| ||||||||||| Sbjct: 959 tcactgtcgaaacgctttgt 940
>gb|BT000140.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (At3g05530) mRNA, complete cds Length = 1351 Score = 214 bits (108), Expect = 2e-52 Identities = 357/440 (81%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1271 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1212 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1211 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1152 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1151 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1092 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1091 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1032 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1031 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 972 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 971 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 912 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 911 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 852 Query: 509 tcactgtcaaaacgctttgt 528 |||||||| ||||||||||| Sbjct: 851 tcactgtcgaaacgctttgt 832
>gb|AY062705.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (At3g05530; F22F7.1) mRNA, complete cds Length = 1520 Score = 214 bits (108), Expect = 2e-52 Identities = 357/440 (81%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1378 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1319 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1318 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1259 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1258 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1199 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1198 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1139 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1138 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1079 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1078 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 1019 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 1018 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 959 Query: 509 tcactgtcaaaacgctttgt 528 |||||||| ||||||||||| Sbjct: 958 tcactgtcgaaacgctttgt 939
>emb|BX842123.1|CNS09YBF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1435 Score = 214 bits (108), Expect = 2e-52 Identities = 357/440 (81%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1335 gcgtagtagttcaagcttgcattcttcttggcctggacttggatgataccttcattgaag 1276 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1275 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1216 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1215 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1156 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1155 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1096 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1095 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1036 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1035 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 976 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 975 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 916 Query: 509 tcactgtcaaaacgctttgt 528 |||||||| ||||||||||| Sbjct: 915 tcactgtcgaaacgctttgt 896
>gb|AF123394.1|AF123394 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (RPT5a) mRNA, complete cds Length = 1390 Score = 214 bits (108), Expect = 2e-52 Identities = 357/440 (81%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1307 gcgtagtagttcaagcttgctttcttcttggcctgaacttggatgataccttcattgaag 1248 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1247 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1188 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || |||||||| || |||||||||||||| ||||| || || ||||||||||||||| Sbjct: 1187 actgctttcagctgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttg 1128 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1127 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1068 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1067 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1008 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1007 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 948 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 947 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 888 Query: 509 tcactgtcaaaacgctttgt 528 |||||||| ||||||||||| Sbjct: 887 tcactgtcgaaacgctttgt 868
>dbj|D88663.1| Brassica campestris mRNA for Tat binding protein 1, complete cds Length = 1433 Score = 214 bits (108), Expect = 2e-52 Identities = 357/440 (81%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1330 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1271 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || |||||| |||||||||| ||||| | || ||||| | ||| ||||| || ||||| Sbjct: 1270 tcctcatggttcacctctgtggcatcacgacgaagagctaacataccagcctctacacat 1211 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || ||||| || ||||||||||||||||| ||||| | || ||||||||||||||| Sbjct: 1210 actgctttcagttgagcaccattgaaatcatctgttgatctcgcaagctcctcaaagttg 1151 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| || |||||||| || || || | |||||||||||| Sbjct: 1150 acgtctgggtggacattcatcttcctcgagtgaatctgtaagattctggctcttgcttct 1091 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || ||||| |||||||||||||| | ||| || ||||||||||| | | || || Sbjct: 1090 tctgttggatgtgggaactcaatcttcctgtctagccgaccagaacgcataagtgccggg 1031 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || ||||||||||| || || || ||||| |||||||| || | |||||| || || ||| Sbjct: 1030 tccagaatatctgctcggttagtggcagcaatcaccttaatacgctcatcgctactgaat 971 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 ||||| ||||| || |||| |||||||||||| | |||||||| ||||| || || ||| Sbjct: 970 ccatcaagctggttaagcagctccaacatagtcctctgcacttccctgtctccgcttact 911 Query: 509 tcactgtcaaaacgctttgt 528 |||||||||||||||||||| Sbjct: 910 tcactgtcaaaacgctttgt 891
>gb|DQ226970.1| Boechera divaricarpa isolate AD-26SProt mRNA sequence Length = 501 Score = 212 bits (107), Expect = 9e-52 Identities = 341/419 (81%) Strand = Plus / Plus Query: 110 ttcttctttgcttgcacttggataatgccttcattgaaatcttcatggatcacctctgta 169 |||||||| || || |||||||| || ||||||||||| ||||||||| |||||||||| Sbjct: 83 ttcttcttggcctggacttggatgataccttcattgaagtcttcatggctcacctctgtg 142 Query: 170 gcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagctgtgcacca 229 ||||| | || ||||| | ||||||||| || ||||| || || |||||||| || ||| Sbjct: 143 gcatcacggcgaagagctaacatgccagcctctacacacactgctttcagctgagctcca 202 Query: 230 ttgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttcatc 289 ||||||||||| ||||| | || ||||||||||||||||| || || | || |||||| Sbjct: 203 ttgaaatcatctgttgatcttgcaagctcctcaaagttgacgtctgggttgacattcatc 262 Query: 290 tttcttgagtgaatttgcaaaatccgagctcttgcttcttccgtcggatgagggaactca 349 || || |||||||| ||||| || | || ||||||||||| || || || |||||||| Sbjct: 263 ttcctcgagtgaatctgcaagattctggcccttgcttcttctgttgggtgtgggaactcg 322 Query: 350 atctttcggtccaggcgaccagaacggagtaaagcaggatcaagaatatctgcacgattg 409 ||||||| ||| || ||||||||||| | | || || || |||||||||||||| || Sbjct: 323 atctttctgtctagtcgaccagaacgcatgagtgctgggtccagaatatctgcacggtta 382 Query: 410 gttgcagctatcacctttatcctctcatcactgctaaatccatctagctgattcagcaac 469 || || || |||||||| || | ||||| || || ||||| || || ||||| |||||| Sbjct: 383 gtggctgcaatcaccttaatacgttcatcgctactgaatccgtcgagttgattgagcaac 442 Query: 470 tccaacatagttcgttgcacttctctgtcaccactaacttcactgtcaaaacgctttgt 528 ||||||||||||| |||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 443 tccaacatagttctctgcacttccctgtctccgctgacttcactgtcaaaacgctttgt 501
>gb|DQ226751.1| Boechera divaricarpa isolate SLW-A-E11 mRNA sequence Length = 501 Score = 212 bits (107), Expect = 9e-52 Identities = 341/419 (81%) Strand = Plus / Plus Query: 110 ttcttctttgcttgcacttggataatgccttcattgaaatcttcatggatcacctctgta 169 |||||||| || || |||||||| || ||||||||||| ||||||||| |||||||||| Sbjct: 83 ttcttcttggcctggacttggatgataccttcattgaagtcttcatggctcacctctgtg 142 Query: 170 gcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagctgtgcacca 229 ||||| | || ||||| | ||||||||| || ||||| || || |||||||| || ||| Sbjct: 143 gcatcacggcgaagagctaacatgccagcctctacacacactgctttcagctgagctcca 202 Query: 230 ttgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttcatc 289 ||||||||||| ||||| | || ||||||||||||||||| || || | || |||||| Sbjct: 203 ttgaaatcatctgttgatcttgcaagctcctcaaagttgacgtctgggttgacattcatc 262 Query: 290 tttcttgagtgaatttgcaaaatccgagctcttgcttcttccgtcggatgagggaactca 349 || || |||||||| ||||| || | || ||||||||||| || || || |||||||| Sbjct: 263 ttcctcgagtgaatctgcaagattctggcccttgcttcttctgttgggtgtgggaactcg 322 Query: 350 atctttcggtccaggcgaccagaacggagtaaagcaggatcaagaatatctgcacgattg 409 ||||||| ||| || ||||||||||| | | || || || |||||||||||||| || Sbjct: 323 atctttctgtctagtcgaccagaacgcatgagtgctgggtccagaatatctgcacggtta 382 Query: 410 gttgcagctatcacctttatcctctcatcactgctaaatccatctagctgattcagcaac 469 || || || |||||||| || | ||||| || || ||||| || || ||||| |||||| Sbjct: 383 gtggctgcaatcaccttaatacgttcatcgctactgaatccgtcgagttgattgagcaac 442 Query: 470 tccaacatagttcgttgcacttctctgtcaccactaacttcactgtcaaaacgctttgt 528 ||||||||||||| |||||||| ||||| || || ||||||||||||||||||||||| Sbjct: 443 tccaacatagttctctgcacttccctgtctccgctgacttcactgtcaaaacgctttgt 501
>emb|BX823732.1|CNS0A5FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1467 Score = 206 bits (104), Expect = 5e-50 Identities = 356/440 (80%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1346 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1287 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1286 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1227 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || |||||||| || ||||||| |||||| ||||| || || ||||||||||||||| Sbjct: 1226 actgctttcagctgagctccattgagatcatctgttgatcgtgcaagctcctcaaagttg 1167 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1166 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1107 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1106 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1047 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1046 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 987 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 986 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 927 Query: 509 tcactgtcaaaacgctttgt 528 |||||||| ||||||||||| Sbjct: 926 tcactgtcgaaacgctttgt 907
>emb|BX823750.1|CNS0A4NL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 190 bits (96), Expect = 3e-45 Identities = 354/440 (80%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1371 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1312 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1311 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1252 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || |||||||| || ||||||| |||||| ||||| || || ||||||||| ||||| Sbjct: 1251 actgctttcagctgagctccattgagatcatctgttgatcgtgcaagctcctcagagttg 1192 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1191 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1132 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1131 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 1072 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 1071 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 1012 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 1011 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 952 Query: 509 tcactgtcaaaacgctttgt 528 |||||||| | ||||||||| Sbjct: 951 tcactgtcgagacgctttgt 932
>gb|AF081573.1|AF081573 Arabidopsis thaliana 19S proteasome regulatory complex subunit S6A mRNA, complete cds Length = 1275 Score = 190 bits (96), Expect = 3e-45 Identities = 354/440 (80%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 1271 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 1212 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 ||||||||| |||||||||| ||||| | || ||||| | |||||| || || ||||| Sbjct: 1211 tcttcatggttcacctctgtggcatcacggcgaagagctaacatgcctgcctctacacac 1152 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || |||||||| || |||| ||||||||| || || || || ||||||||||||| | Sbjct: 1151 actgctttcagctgagctccatggaaatcatctgtggatcgtgcaagctcctcaaagtgg 1092 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || || || || |||||||| ||||||||||| ||||| || | ||||| |||||| Sbjct: 1091 acgtctgggtggacattcatcttccttgagtgaatctgcaagattcttgctctcgcttct 1032 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || |||||||||||||||| ||| | ||||||||||| | | || || Sbjct: 1031 tcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacgcatgagtgctggg 972 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || |||||||||||||| || || || || |||||||| || | ||||| || || ||| Sbjct: 971 tccagaatatctgcacggttagtagctgcaatcaccttaatacgttcatcgctactgaat 912 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 || || || ||||| ||||||||||||||||| | |||||||| ||||| || || ||| Sbjct: 911 ccgtcaagttgattgagcaactccaacatagtcctctgcacttccctgtctccgctgact 852 Query: 509 tcactgtcaaaacgctttgt 528 |||||||| ||||||||||| Sbjct: 851 tcactgtcgaaacgctttgt 832
>emb|X74426.1|LEMA1 L.esculentum LeMA-1 mRNA for putatve Mg-dependent ATPase 1 Length = 1611 Score = 159 bits (80), Expect = 1e-35 Identities = 341/428 (79%) Strand = Plus / Minus Query: 101 aagctggacttcttctttgcttgcacttggataatgccttcattgaaatcttcatggatc 160 ||||||| |||||||| ||||| ||||| || || ||||||||||| |||||||| | Sbjct: 1294 aagctggctttcttcttggcttgaacttgaatgataccttcattgaagtcttcatgagtt 1235 Query: 161 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 220 ||||| || ||||| | || || || |||||||| || || ||||| ||||| |||| | Sbjct: 1234 acctcagtggcatcgcgacggagtgctagcatgcctgcctcaacacatacagctttcaac 1175 Query: 221 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 280 ||||| ||||| |||||||| || || ||||||| || |||||||| ||||| || | Sbjct: 1174 tgtgccccattaaaatcatctgtcgaccgagccaattcttcaaagttaacatctgggttg 1115 Query: 281 acgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttcttccgtcggatga 340 || ||||||||||| || || || |||| |||||||| || ||||| || || || || Sbjct: 1114 acattcatctttctggaatggatctgcaggatccgagccctggcttcctctgtggggtgg 1055 Query: 341 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaagaatatct 400 ||||| || || || || |||| |||||||| || | ||||||||||| | |||||| Sbjct: 1054 gggaattcgattttacgatccaaacgaccagatcgcatcaaagcaggatccaaaatatca 995 Query: 401 gcacgattggttgcagctatcacctttatcctctcatcactgctaaatccatctagctga 460 || | || ||||| ||||||||||| |||| ||||| |||||||| ||||| ||||| Sbjct: 994 gctctgtttgttgctgctatcaccttaatccgatcatcgctgctaaaaccatcgagctgg 935 Query: 461 ttcagcaactccaacatagttcgttgcacttctctgtcaccactaacttcactgtcaaaa 520 || || |||||||||||||||||||| || |||| || ||||||||||| || |||||| Sbjct: 934 ttaagtaactccaacatagttcgttggacctctcgatccccactaacttcgctatcaaaa 875 Query: 521 cgctttgt 528 |||||||| Sbjct: 874 cgctttgt 867
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 422 acctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatagtt 481 |||||||||||||| ||||| || |||||||||||||||||||||||||||||||| || Sbjct: 34285785 acctttatcctctcgtcactactgaatccatctagctgattcagcaactccaacattgtg 34285844 Query: 482 cgttgcacttctctgtcaccactaacttcactgt 515 || ||||||||||||||||||||||||||||||| Sbjct: 34285845 cgctgcacttctctgtcaccactaacttcactgt 34285878 Score = 113 bits (57), Expect = 6e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 161 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 220 |||||||||||||| | ||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 34285149 acctctgtagcatctcggcgtagggcaagcatgcctgcttctacacaaacggccttcagt 34285208 Query: 221 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 280 |||||||||||||| || || || || || |||| ||| ||||||||||||||||| | | Sbjct: 34285209 tgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaagttgacatcagggttt 34285268 Query: 281 acgttcatctttcttga 297 || ||||| |||||||| Sbjct: 34285269 acattcatttttcttga 34285285 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 304 ttgcaaaatccgagctcttgcttcttccgtcggatgagggaactcaatctttcggtccag 363 ||||||||| | ||||| ||||||||| | ||||||||||||||||| ||||||||||| Sbjct: 34285424 ttgcaaaattctagctcgtgcttcttcggatggatgagggaactcaatttttcggtccag 34285483 Query: 364 gcgaccagaacggagtaaagcaggatcaagaatatctgcacgattggttgcagctatcac 423 | |||||| | | ||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 34285484 cctaccagacctcatcaaagcaggatcaagaatgtccgcgcgattagttgcagctatcac 34285543 Query: 424 ct 425 || Sbjct: 34285544 ct 34285545 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 34284734 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 34284793 Query: 146 aaatc 150 ||||| Sbjct: 34284794 aaatc 34284798
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 422 acctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatagtt 481 |||||||||||||| ||||| || |||||||||||||||||||||||||||||||| || Sbjct: 121058 acctttatcctctcgtcactactgaatccatctagctgattcagcaactccaacattgtg 121117 Query: 482 cgttgcacttctctgtcaccactaacttcactgt 515 || ||||||||||||||||||||||||||||||| Sbjct: 121118 cgctgcacttctctgtcaccactaacttcactgt 121151 Score = 113 bits (57), Expect = 6e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 161 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 220 |||||||||||||| | ||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 120422 acctctgtagcatctcggcgtagggcaagcatgcctgcttctacacaaacggccttcagt 120481 Query: 221 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 280 |||||||||||||| || || || || || |||| ||| ||||||||||||||||| | | Sbjct: 120482 tgtgcaccattgaagtcgtccgtagatcgtgccaactcttcaaagttgacatcagggttt 120541 Query: 281 acgttcatctttcttga 297 || ||||| |||||||| Sbjct: 120542 acattcatttttcttga 120558 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 304 ttgcaaaatccgagctcttgcttcttccgtcggatgagggaactcaatctttcggtccag 363 ||||||||| | ||||| ||||||||| | ||||||||||||||||| ||||||||||| Sbjct: 120697 ttgcaaaattctagctcgtgcttcttcggatggatgagggaactcaatttttcggtccag 120756 Query: 364 gcgaccagaacggagtaaagcaggatcaagaatatctgcacgattggttgcagctatcac 423 | |||||| | | ||||||||||||||||| || || ||||| |||||||||||||| Sbjct: 120757 cctaccagacctcatcaaagcaggatcaagaatgtccgcgcgattagttgcagctatcac 120816 Query: 424 ct 425 || Sbjct: 120817 ct 120818 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| || ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 120007 taagcgtaataatttaaactggacttctttttggcttgcacttgtatgatcccttcattg 120066 Query: 146 aaatc 150 ||||| Sbjct: 120067 aaatc 120071
>ref|NM_100781.3| Arabidopsis thaliana ATPase/ calmodulin binding AT1G09100 mRNA, complete cds Length = 1474 Score = 135 bits (68), Expect = 2e-28 Identities = 347/440 (78%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1324 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 1265 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || |||||| ||||||| || ||||||| || || |||||||| || ||||| ||||| Sbjct: 1264 tcctcatggttcacctcagttgcatcccggcgcagggcaagcatacccgcttcaacacac 1205 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1204 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1145 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || | || || ||||| || ||||| || || || || |||| |||| |||||| Sbjct: 1144 acgtctgcattcacattcattttccttgaatgtatctgtaagatcctgcctctagcttct 1085 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || || ||||| || || || |||| ||||||||||| | | |||||| Sbjct: 1084 tcagtggggtgcggaaactcgattttacgatccaaacgaccagaacgcataagggcagga 1025 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || || ||||| |||||||| || || || || ||||| || | ||||| ||||| ||| Sbjct: 1024 tctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctgctgaat 965 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 ||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||||||||| Sbjct: 964 ccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctccactaact 905 Query: 509 tcactgtcaaaacgctttgt 528 || || |||||||||||||| Sbjct: 904 tcgctatcaaaacgctttgt 885
>gb|AY124813.1| Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1272 Score = 135 bits (68), Expect = 2e-28 Identities = 347/440 (78%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1268 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 1209 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || |||||| ||||||| || ||||||| || || |||||||| || ||||| ||||| Sbjct: 1208 tcctcatggttcacctcagttgcatcccggcgcagggcaagcatacccgcttcaacacac 1149 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1148 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1089 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || | || || ||||| || ||||| || || || || |||| |||| |||||| Sbjct: 1088 acgtctgcattcacattcattttccttgaatgtatctgtaagatcctgcctctagcttct 1029 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || || ||||| || || || |||| ||||||||||| | | |||||| Sbjct: 1028 tcagtggggtgcggaaactcgattttacgatccaaacgaccagaacgcataagggcagga 969 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || || ||||| |||||||| || || || || ||||| || | ||||| ||||| ||| Sbjct: 968 tctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctgctgaat 909 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 ||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||||||||| Sbjct: 908 ccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctccactaact 849 Query: 509 tcactgtcaaaacgctttgt 528 || || |||||||||||||| Sbjct: 848 tcgctatcaaaacgctttgt 829
>gb|AF412095.1|AF412095 Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1448 Score = 135 bits (68), Expect = 2e-28 Identities = 347/440 (78%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1297 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 1238 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || |||||| ||||||| || ||||||| || || |||||||| || ||||| ||||| Sbjct: 1237 tcctcatggttcacctcagttgcatcccggcgcagggcaagcatacccgcttcaacacac 1178 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1177 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1118 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || | || || ||||| || ||||| || || || || |||| |||| |||||| Sbjct: 1117 acgtctgcattcacattcattttccttgaatgtatctgtaagatcctgcctctagcttct 1058 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || || ||||| || || || |||| ||||||||||| | | |||||| Sbjct: 1057 tcagtggggtgcggaaactcgattttacgatccaaacgaccagaacgcataagggcagga 998 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || || ||||| |||||||| || || || || ||||| || | ||||| ||||| ||| Sbjct: 997 tctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctgctgaat 938 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 ||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||||||||| Sbjct: 937 ccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctccactaact 878 Query: 509 tcactgtcaaaacgctttgt 528 || || |||||||||||||| Sbjct: 877 tcgctatcaaaacgctttgt 858
>gb|AY050423.1| Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1415 Score = 135 bits (68), Expect = 2e-28 Identities = 347/440 (78%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 1297 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 1238 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || |||||| ||||||| || ||||||| || || |||||||| || ||||| ||||| Sbjct: 1237 tcctcatggttcacctcagttgcatcccggcgcagggcaagcatacccgcttcaacacac 1178 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1177 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1118 Query: 269 acatcaggatgtacgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttct 328 || || | || || ||||| || ||||| || || || || |||| |||| |||||| Sbjct: 1117 acgtctgcattcacattcattttccttgaatgtatctgtaagatcctgcctctagcttct 1058 Query: 329 tccgtcggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcagga 388 || || || || || ||||| || || || |||| ||||||||||| | | |||||| Sbjct: 1057 tcagtggggtgcggaaactcgattttacgatccaaacgaccagaacgcataagggcagga 998 Query: 389 tcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactgctaaat 448 || || ||||| |||||||| || || || || ||||| || | ||||| ||||| ||| Sbjct: 997 tctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctgctgaat 938 Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcaccactaact 508 ||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||||||||| Sbjct: 937 ccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctccactaact 878 Query: 509 tcactgtcaaaacgctttgt 528 || || |||||||||||||| Sbjct: 877 tcgctatcaaaacgctttgt 858
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 160 cacctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcag 219 ||||||||||||||| | ||| || |||||||| |||||||| ||||||||||| ||||| Sbjct: 3692521 cacctctgtagcatctcgccgcagtgcaagcataccagcttcgacacaaacagctttcag 3692462 Query: 220 ctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatg 279 || || |||||||| ||||| ||||| ||||||||||| ||||| || ||||| || | Sbjct: 3692461 ttgcgctccattgaagtcatctgttgagcgagccagctcttcaaaattcacatctgggtt 3692402 Query: 280 tacgttcatctttcttgagtgaat 303 ||| ||||| |||||||||||||| Sbjct: 3692401 tacattcatttttcttgagtgaat 3692378 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 316 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 375 ||||||||||||||| | |||||||| ||||||||||||||||||| |||||||| || Sbjct: 3692262 agctcttgcttcttcagatggatgaggaaactcaatctttcggtccaaacgaccagatcg 3692203 Query: 376 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 425 | ||||||||||||||||| || |||||||| ||||| ||||| |||| Sbjct: 3692202 catcaaagcaggatcaagaatgtcagcacgattcgttgccgctatgacct 3692153 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 422 acctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatagtt 481 |||||||||| ||| ||||| ||||||||||| || || |||||||| ||||||||||| Sbjct: 3691829 acctttatccgctcgtcactactaaatccatcgagttggttcagcaattccaacatagtc 3691770 Query: 482 cgttgcacttctctgtcaccactaacttcactgtca 517 | || |||||||||||||||||||| ||||||||| Sbjct: 3691769 ctctgaacttctctgtcaccactaacctcactgtca 3691734 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| | ||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 3693141 taagcgtaataatttaggctagacttcttcttagcctgcacctgtattatgccttcgttg 3693082 Query: 146 aaatcttcatg 156 || || ||||| Sbjct: 3693081 aagtcctcatg 3693071
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 160 cacctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcag 219 ||||||||||||||| | ||| || |||||||| |||||||| ||||||||||| ||||| Sbjct: 86749 cacctctgtagcatctcgccgcagtgcaagcataccagcttcgacacaaacagctttcag 86690 Query: 220 ctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatg 279 || || |||||||| ||||| ||||| ||||||||||| ||||| || ||||| || | Sbjct: 86689 ttgcgctccattgaagtcatctgttgagcgagccagctcttcaaaattcacatctgggtt 86630 Query: 280 tacgttcatctttcttgagtgaat 303 ||| ||||| |||||||||||||| Sbjct: 86629 tacattcatttttcttgagtgaat 86606 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 316 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 375 ||||||||||||||| | |||||||| ||||||||||||||||||| |||||||| || Sbjct: 86490 agctcttgcttcttcagatggatgaggaaactcaatctttcggtccaaacgaccagatcg 86431 Query: 376 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 425 | ||||||||||||||||| || |||||||| ||||| ||||| |||| Sbjct: 86430 catcaaagcaggatcaagaatgtcagcacgattcgttgccgctatgacct 86381 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 422 acctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatagtt 481 |||||||||| ||| ||||| ||||||||||| || || |||||||| ||||||||||| Sbjct: 86057 acctttatccgctcgtcactactaaatccatcgagttggttcagcaattccaacatagtc 85998 Query: 482 cgttgcacttctctgtcaccactaacttcactgtca 517 | || |||||||||||||||||||| ||||||||| Sbjct: 85997 ctctgaacttctctgtcaccactaacctcactgtca 85962 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 86 taagcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattg 145 |||||||||||||| | ||| ||||||||||| || ||||| || || |||||||| ||| Sbjct: 87369 taagcgtaataatttaggctagacttcttcttagcctgcacctgtattatgccttcgttg 87310 Query: 146 aaatcttcatg 156 || || ||||| Sbjct: 87309 aagtcctcatg 87299
>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence Length = 125129 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 316 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 375 ||||||||||||||| || || ||||| ||||||||||| ||||||| ||||||||||| Sbjct: 5832 agctcttgcttcttcagtagggtgaggaaactcaatcttgcggtccaatcgaccagaacg 5891 Query: 376 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 425 | | |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 5892 catgagggcaggatcaagaatatctgcacgatttgttgctgctatcacct 5941 Score = 79.8 bits (40), Expect = 8e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 190 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 249 ||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || || Sbjct: 5620 catgccagcctcaacacagacagccttcagttgtgctccattgaaatcatctgtggaccg 5679 Query: 250 agccagctcctcaaagttgacatcaggatgtacgttcatctttcttga 297 ||| || || |||||||| ||||| || || || |||||||| ||||| Sbjct: 5680 agctagttcttcaaagtttacatctgggtgaacattcatcttccttga 5727 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 434 tcatcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttct 493 |||||||||||||| ||||| |||||||| |||||||| ||||| |||| ||| || || Sbjct: 6259 tcatcactgctaaaaccatcaagctgattgagcaactctaacatggttctttgaacctcc 6318 Query: 494 ctgtcaccactaacttcactg 514 ||||| ||||| ||||||||| Sbjct: 6319 ctgtccccactcacttcactg 6339
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence Length = 110437 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 316 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 375 ||||||||||||||| || || ||||| ||||||||||| ||||||| ||||||||||| Sbjct: 20433 agctcttgcttcttcagtagggtgaggaaactcaatcttgcggtccaatcgaccagaacg 20374 Query: 376 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 425 | | |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 20373 catgagggcaggatcaagaatatctgcacgatttgttgctgctatcacct 20324 Score = 79.8 bits (40), Expect = 8e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 190 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 249 ||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || || Sbjct: 20645 catgccagcctcaacacagacagccttcagttgtgctccattgaaatcatctgtggaccg 20586 Query: 250 agccagctcctcaaagttgacatcaggatgtacgttcatctttcttga 297 ||| || || |||||||| ||||| || || || |||||||| ||||| Sbjct: 20585 agctagttcttcaaagtttacatctgggtgaacattcatcttccttga 20538 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 434 tcatcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttct 493 |||||||||||||| ||||| |||||||| |||||||| ||||| |||| ||| || || Sbjct: 20006 tcatcactgctaaaaccatcaagctgattgagcaactctaacatggttctttgaacctcc 19947 Query: 494 ctgtcaccactaacttcactg 514 ||||| ||||| ||||||||| Sbjct: 19946 ctgtccccactcacttcactg 19926
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence Length = 129197 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 316 agctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 375 ||||||||||||||| || || ||||| ||||||||||| ||||||| ||||||||||| Sbjct: 30692 agctcttgcttcttcagtagggtgaggaaactcaatcttgcggtccaatcgaccagaacg 30633 Query: 376 gagtaaagcaggatcaagaatatctgcacgattggttgcagctatcacct 425 | | |||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 30632 catgagggcaggatcaagaatatctgcacgatttgttgctgctatcacct 30583 Score = 79.8 bits (40), Expect = 8e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 190 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 249 ||||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || || Sbjct: 30904 catgccagcctcaacacagacagccttcagttgtgctccattgaaatcatctgtggaccg 30845 Query: 250 agccagctcctcaaagttgacatcaggatgtacgttcatctttcttga 297 ||| || || |||||||| ||||| || || || |||||||| ||||| Sbjct: 30844 agctagttcttcaaagtttacatctgggtgaacattcatcttccttga 30797 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 434 tcatcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttct 493 |||||||||||||| ||||| |||||||| |||||||| ||||| |||| ||| || || Sbjct: 30265 tcatcactgctaaaaccatcaagctgattgagcaactctaacatggttctttgaacctcc 30206 Query: 494 ctgtcaccactaacttcactg 514 ||||| ||||| ||||||||| Sbjct: 30205 ctgtccccactcacttcactg 30185
>dbj|D78490.1| Brassica rapa mRNA for human immunodeficiency virus Tat binding protein 1, partial cds Length = 308 Score = 105 bits (53), Expect = 1e-19 Identities = 167/205 (81%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 205 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 146 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || |||||| |||||||||| ||||| | || ||||| | ||| ||||| || ||||| Sbjct: 145 tcctcatggttcacctctgtggcatcacgacgaagagctaacataccagcctctacacat 86 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || ||||| || ||||||||||||||||| ||||| | || ||||||||||||||| Sbjct: 85 actgctttcagttgagcaccattgaaatcatctgttgatctcgcaagctcctcaaagttg 26 Query: 269 acatcaggatgtacgttcatctttc 293 || || || || || |||||||||| Sbjct: 25 acgtctgggtggacattcatctttc 1
>emb|BX815750.1|CNS0AAOB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| ||||||||||| | |||||||| ||||| ||||| || || || ||||||||| Sbjct: 1324 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccgtcattgaaa 1265 Query: 149 tcttcatggatcacctctgtagcatccctccgtagagcaagcatgccagcttccacacaa 208 || |||||| ||||||| || ||||| | || || |||||||| || ||||| ||||| Sbjct: 1264 tcctcatggttcacctcagttgcatcgcggcgcagggcaagcatacccgcttcaacacac 1205 Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 || || || || || || |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 1204 actgctttgagttgagctccattgaaatcatccgttgaccgagcaagctcttcaaaattg 1145 Query: 269 ac 270 || Sbjct: 1144 ac 1143 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 383 gcaggatcaagaatatctgcacgattggttgcagctatcacctttatcctctcatcactg 442 |||||||| || ||||| |||||||| || || || || ||||| || | ||||| ||| Sbjct: 1030 gcaggatctagtatatcagcacgatttgtcgctgcaataaccttaatgcgatcatcgctg 971 Query: 443 ctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacca 502 || |||||||| ||||| || |||| ||||||||| || | ||| || || | ||| ||| Sbjct: 970 ctgaatccatcaagctggttgagcagctccaacattgtcctttgtacctcacggtctcca 911 Query: 503 ctaacttcactgtcaaaacgctttgt 528 |||||||| || |||||||||||||| Sbjct: 910 ctaacttcgctatcaaaacgctttgt 885
>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence, complete sequence Length = 91924 Score = 85.7 bits (43), Expect = 1e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 161 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 220 |||||||| ||||| | || ||||| | |||||| || || ||||| || || |||||| Sbjct: 15025 acctctgtggcatcacggcgaagagctaacatgcctgcctctacacacactgctttcagc 15084 Query: 221 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 280 || || |||||||||||||| ||||| || || ||||||||||||||||| || || || Sbjct: 15085 tgagctccattgaaatcatctgttgatcgtgcaagctcctcaaagttgacgtctgggtgg 15144 Query: 281 acgttcatctttcttgagtgaat 303 || |||||||| ||||||||||| Sbjct: 15145 acattcatcttccttgagtgaat 15167 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| || |||||||| | |||||||| || || |||||||| || ||||||||||| Sbjct: 14854 gcgtagtagttcaagcttgctttcttcttggcctggacttggatgataccttcattgaag 14913 Query: 149 tcttcatggatcacct 164 ||||||||| |||||| Sbjct: 14914 tcttcatggttcacct 14929 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 458 tgattcagcaactccaacatagttcgttgcacttctctgtcaccactaacttcactgt 515 ||||| ||||||||||||||||| | |||||||| ||||| || || |||||||||| Sbjct: 15502 tgattgagcaactccaacatagtcctctgcacttccctgtctccgctgacttcactgt 15559 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 317 gctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 375 ||||| |||||||| || || || |||||||||||||||| ||| | ||||||||||| Sbjct: 15267 gctctcgcttcttcggttgggtgtgggaactcaatctttctgtctaatcgaccagaacg 15325
>ref|XM_471556.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 335 ggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaaga 394 ||||||||||| ||||||||| | || | || ||||| || || ||||||||||||||| Sbjct: 845 ggatgagggaattcaatcttttgatctaaacggccagatcgcagaaaagcaggatcaaga 786 Query: 395 atatctgcacgattggttgcagctatcacctttatcctctcat 437 | |||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 785 acttctggccgattagttgcagctattacctttatactctcat 743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 |||||||| |||||||||||||| |||||||| || | | ||||| ||| |||||||| Sbjct: 971 acagcctttagctgtgcaccattaaaatcatctgtacagcaagccaactcttcaaagttt 912 Query: 269 acatcagg 276 |||||||| Sbjct: 911 acatcagg 904
>dbj|AK071386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092N19, full insert sequence Length = 1482 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 335 ggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaaga 394 ||||||||||| ||||||||| | || | || ||||| || || ||||||||||||||| Sbjct: 968 ggatgagggaattcaatcttttgatctaaacggccagatcgcagaaaagcaggatcaaga 909 Query: 395 atatctgcacgattggttgcagctatcacctttatcctctcat 437 | |||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 908 acttctggccgattagttgcagctattacctttatactctcat 866 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 |||||||| |||||||||||||| |||||||| || | | ||||| ||| |||||||| Sbjct: 1094 acagcctttagctgtgcaccattaaaatcatctgtacagcaagccaactcttcaaagttt 1035 Query: 269 acatcagg 276 |||||||| Sbjct: 1034 acatcagg 1027
>dbj|AB044593.1| Brassica rapa BrTBP gene for Tat binding protein like protein, complete cds Length = 4780 Score = 63.9 bits (32), Expect = 5e-07 Identities = 113/140 (80%) Strand = Plus / Minus Query: 161 acctctgtagcatccctccgtagagcaagcatgccagcttccacacaaacagccttcagc 220 |||||||| ||||| | || ||||| | ||||||||| || ||||| || || ||||| Sbjct: 3831 acctctgtggcatcacggcgaagagctaacatgccagcctctacacatactgctttcagt 3772 Query: 221 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 280 || || |||||||||||||| || || | || ||||||||||||||||| || || ||| Sbjct: 3771 tgagcgccattgaaatcatctgtcgatcttgcaagctcctcaaagttgacgtctgggtgt 3712 Query: 281 acgttcatctttcttgagtg 300 || |||||||| || ||||| Sbjct: 3711 acattcatcttcctcgagtg 3692 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 420 tcacctttatcctctcatcactgctaaatccatctagctgattcagcaactccaacatag 479 ||||||| || | |||||| || || |||||||| |||||||| || | ||||||||||| Sbjct: 3397 tcaccttaatacgctcatcgctactgaatccatcaagctgattaagtagctccaacatag 3338 Query: 480 ttcgttgcacttctctgtcaccactaacttcactg 514 | | |||||||| ||||| ||||| ||||||||| Sbjct: 3337 tcctctgcacttccctgtctccacttacttcactg 3303 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 317 gctcttgcttcttccgtcggatgagggaactcaatctttcggtccaggcgaccagaacg 375 |||||||||||||| || ||||| |||||||||||||| | ||| | ||||||||||| Sbjct: 3602 gctcttgcttcttctgttggatgtgggaactcaatcttcctgtctaatcgaccagaacg 3544 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 110 ttcttctttgcttgcacttggataatgccttcattgaaatcttcatggatcacct 164 |||||||| || || |||||||| || ||||||||||| || |||||| |||||| Sbjct: 3976 ttcttcttggcctggacttggatgataccttcattgaagtcctcatggttcacct 3922
>gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 110514 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||| ||||||||||| | |||||||| ||||| ||||| || || |||||||||||| Sbjct: 6509 gcgtagtaattcaagcttgctttcttcttggcttgtacttgaattataccttcattgaaa 6450 Query: 149 tcttcatggatcacct 164 || |||||| |||||| Sbjct: 6449 tcctcatggttcacct 6434 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 185 gcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagtt 244 |||||||| || ||||| ||||| || || || || || || |||||||||||||| ||| Sbjct: 6334 gcaagcatacccgcttcaacacacactgctttgagttgagctccattgaaatcatccgtt 6275 Query: 245 gaacgagccagctcctcaaagttgac 270 || ||||| ||||| ||||| ||||| Sbjct: 6274 gaccgagcaagctcttcaaaattgac 6249 Score = 44.1 bits (22), Expect = 0.46 Identities = 67/82 (81%) Strand = Plus / Minus Query: 434 tcatcactgctaaatccatctagctgattcagcaactccaacatagttcgttgcacttct 493 ||||| ||||| |||||||| ||||| || |||| ||||||||| || | ||| || || Sbjct: 5824 tcatcgctgctgaatccatcaagctggttgagcagctccaacattgtcctttgtacctca 5765 Query: 494 ctgtcaccactaacttcactgt 515 | ||| ||||||||||| |||| Sbjct: 5764 cggtctccactaacttcgctgt 5743
>gb|AY108940.1| Zea mays PCO101909 mRNA sequence Length = 961 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttc 482 ||||||||||||||||||| |||||||||||||| Sbjct: 352 ccatctagctgattcagcagctccaacatagttc 319
>gb|AY105631.1| Zea mays PCO101908 mRNA sequence Length = 1272 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttc 482 ||||||||||||||||||| |||||||||||||| Sbjct: 621 ccatctagctgattcagcagctccaacatagttc 588
>gb|AF281342.1| Oncorhynchus mykiss TAT-binding protein 1 mRNA, partial cds Length = 581 Score = 58.0 bits (29), Expect = 3e-05 Identities = 119/149 (79%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 286 ||||||||||||||||| | | ||||||||||| ||||||||||||| |||||| Sbjct: 479 ccattgaaatcatcagtgcacctggccagctcctcgtagttgacatcagggctgacgttc 420 Query: 287 atctttcttgagtgaatttgcaaaatccgagctcttgcttcttccgtcggatgagggaac 346 ||||| | ||||||||| |||| || || |||| |||||| || | || |||||| Sbjct: 419 atcttgcgtgagtgaatctgcatgatgcgggctcgtgcttcctcattaggcattgggaac 360 Query: 347 tcaatctttcggtccaggcgaccagaacg 375 |||||||| |||||||| || |||||||| Sbjct: 359 tcaatcttacggtccagacgtccagaacg 331
>gb|AY750868.1| Toxoptera citricida putative 26S protease regulatory subunit 6A mRNA, complete cds Length = 1296 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 184 agcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagt 243 ||||| ||| |||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 1197 agcaatcataccagcttcaacacaaacagccttgcattgtgcaccattaaaatcatcagt 1138
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 |||||||| |||||||||||||| |||||||| || | | ||||| ||| |||||||| Sbjct: 130391 acagcctttagctgtgcaccattaaaatcatctgtacagcaagccaactcttcaaagttt 130450 Query: 269 acatcagg 276 |||||||| Sbjct: 130451 acatcagg 130458 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 335 ggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaaga 394 ||||||||||| ||||||||| | || | || ||||| || || ||||||||||||||| Sbjct: 130629 ggatgagggaattcaatcttttgatctaaacggccagatcgcagaaaagcaggatcaaga 130688 Query: 395 atatctgcacgattggttgcagctatcacct 425 | |||| ||||| ||||||||||| |||| Sbjct: 130689 acttctggccgattagttgcagctattacct 130719
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 209 acagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttg 268 |||||||| |||||||||||||| |||||||| || | | ||||| ||| |||||||| Sbjct: 12305507 acagcctttagctgtgcaccattaaaatcatctgtacagcaagccaactcttcaaagttt 12305566 Query: 269 acatcagg 276 |||||||| Sbjct: 12305567 acatcagg 12305574 Score = 54.0 bits (27), Expect = 5e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 335 ggatgagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaaga 394 ||||||||||| ||||||||| | || | || ||||| || || ||||||||||||||| Sbjct: 12305745 ggatgagggaattcaatcttttgatctaaacggccagatcgcagaaaagcaggatcaaga 12305804 Query: 395 atatctgcacgattggttgcagctatcacct 425 | |||| ||||| ||||||||||| |||| Sbjct: 12305805 acttctggccgattagttgcagctattacct 12305835
>dbj|AP006409.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT25E08, TM0299, complete sequence Length = 109465 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 89 gcgtaataattcaagctggacttcttctttgcttgcacttggataatgccttcattgaaa 148 ||||||||||| | ||| | |||||||||||||| ||||| || ||||||| |||||| Sbjct: 62273 gcgtaataatttaggcttgctttcttctttgcttggacttgaatgatgcctttattgaag 62214 Query: 149 tcttcatggatcacct 164 || |||||| |||||| Sbjct: 62213 tcctcatggttcacct 62198
>ref|XM_462104.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G13893g) partial mRNA Length = 1284 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 470 tccaacatagttcgttgcacttctctgtcaccact 504 ||||||||||||| ||| ||||||||||||||||| Sbjct: 896 tccaacatagttctttgtacttctctgtcaccact 862
>ref|XM_745273.1| Aspergillus fumigatus Af293 proteasome regulatory particle subunit Rpt5 (Afu1g06170) partial mRNA Length = 1395 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 177 tccgtagagcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaat 236 |||| ||||||| ||| || ||||||||||| || ||||||||||| |||||| ||| | Sbjct: 1300 tccggagagcaatcataccggcttccacacagacggccttcagctgcgcaccaccgaact 1241 Query: 237 catcagt 243 ||||||| Sbjct: 1240 catcagt 1234 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 339 gagggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaag 393 ||||||| || ||||| |||||||| ||||| |||||||| | |||||||||||| Sbjct: 1138 gagggaattcgatcttgcggtccagtcgaccggaacggagcagagcaggatcaag 1084
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 470 tccaacatagttcgttgcacttctctgtcaccact 504 ||||||||||||| ||| ||||||||||||||||| Sbjct: 1070718 tccaacatagttctttgtacttctctgtcaccact 1070752
>gb|AF117339.1|AF117339 Nicotiana tabacum FtsH-like protein Pftf precursor (Pftf) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2346 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 380 aaagcaggatcaagaatatctgcacgattggttgc 414 ||||||| |||||||||||||||||||||||||| Sbjct: 1235 aaagcagagtcaagaatatctgcacgattggttgc 1201
>gb|BC062019.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase 3, mRNA (cDNA clone MGC:72399 IMAGE:5620971), complete cds Length = 1630 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 286 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| |||||| Sbjct: 1325 ccattgaagtcatcagtgcagcgagccagctcttcatagttcacatcaggactgacgttc 1266 Query: 287 atctttcttgagtg 300 ||||| | |||||| Sbjct: 1265 atcttccgtgagtg 1252
>ref|XM_391773.1| Gibberella zeae PH-1 conserved hypothetical protein (FG11597.1) partial mRNA Length = 1380 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 350 atctttcggtccaggcgaccagaacggagtaaagcaggatcaagaa 395 ||||| ||||| || |||||||||||||| ||||||||||| |||| Sbjct: 1115 atcttgcggtcgagtcgaccagaacggagcaaagcaggatcgagaa 1070
>ref|XM_739971.1| Plasmodium chabaudi chabaudi 26S protease subunit regulatory subunit 6a (PC000285.05.0) partial mRNA Length = 1356 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 221 tgtgcaccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgt 280 ||||||||||| ||||| ||||| || | ||||| || ||||| || ||||| |||| Sbjct: 1220 tgtgcaccattaaaatcgtcagtagatctagccaattcttcaaaattaacatctttatgt 1161 Query: 281 acgttcatctttcttgagtgaatttgcaaaatccgagctcttgcttcttc 330 || ||||| |||||||| || ||||| ||||| | |||||||| |||||| Sbjct: 1160 acattcatttttcttgaatgtatttgtaaaattctagctcttgattcttc 1111
>ref|XM_777098.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) (LOC576830), mRNA Length = 1164 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 194 ccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacgagcc 253 |||||||| |||||||| || || ||| || |||||||| ||||| || ||||||| Sbjct: 935 ccagcttctacacaaactgctttacactgagctccattgaagtcatctgtacaacgagct 876 Query: 254 agctcctcaaagttgacatcag 275 |||||||||||||| ||||||| Sbjct: 875 agctcctcaaagtttacatcag 854
>ref|NM_031595.1| Rattus norvegicus proteasome (prosome, macropain) 26S subunit, ATPase 3 (Psmc3), mRNA Length = 1627 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 286 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| |||||| Sbjct: 1415 ccattgaagtcatcagtgcagcgagccagctcttcatagttcacatcaggactgacgttc 1356 Query: 287 atctttcttgagtg 300 ||||| | |||||| Sbjct: 1355 atcttccgtgagtg 1342
>gb|AY902337.1| Mus musculus strain CAST/EiJ proteasome (prosome, macropain) 26S subunit, ATPase 3 (Psmc3) gene, complete cds Length = 1426 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 200 tccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagctcc 259 |||||||| |||||||| ||| || |||||||| |||||||| | ||||||||||| Sbjct: 1292 tccacacacacagccttgcactgggctccattgaagtcatcagtgcaccgagccagctct 1233 Query: 260 tcaaagttgacatcagga 277 ||| |||| ||||||||| Sbjct: 1232 tcatagttcacatcagga 1215
>gb|U77918.1|RNU77918 Rattus norvegicus spermatogenic cell/sperm-associated Tat-binding protein homolog Sata mRNA, complete cds Length = 1627 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 286 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| |||||| Sbjct: 1415 ccattgaagtcatcagtgcagcgagccagctcttcatagttcacatcaggactgacgttc 1356 Query: 287 atctttcttgagtg 300 ||||| | |||||| Sbjct: 1355 atcttccgtgagtg 1342
>dbj|D83522.1|RATTBP1E Rat liver mRNA for proteasomal ATPase (TBP1), complete cds Length = 1459 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcaggatgtacgttc 286 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| |||||| Sbjct: 1289 ccattgaagtcatcagtgcagcgagccagctcttcatagttcacatcaggactgacgttc 1230 Query: 287 atctttcttgagtg 300 ||||| | |||||| Sbjct: 1229 atcttccgtgagtg 1216
>ref|XM_633525.1| Dictyostelium discoideum hypothetical protein (DDB0186002), partial mRNA Length = 1266 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 458 tgattcagcaactccaacatagttcgttgcacttctctgtcaccactaacttcactgtca 517 ||||| || ||||| ||||| || |||||||| ||||| ||||||||||| ||||| || Sbjct: 893 tgattgagtaactctaacattgtacgttgcacctctctatcaccactaacctcactatcg 834 Query: 518 aaacg 522 ||||| Sbjct: 833 aaacg 829
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 194 ccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttga 246 |||||||| ||||||||||| || | |||||| ||||| ||||| |||||||| Sbjct: 158684 ccagcttcaacacaaacagcttttaactgtgctccattaaaatcgtcagttga 158632
>ref|XM_568336.1| Cryptococcus neoformans var. neoformans JEC21 endopeptidase (CNM01550) partial mRNA Length = 1487 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Minus Query: 190 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 249 |||||| ||||| |||||||||||||||| || ||||| || | ||| || ||||| | Sbjct: 1318 catgcccgcttcaacacaaacagccttcaattgcgcaccgttcatatcctctgttgatct 1259 Query: 250 agccagctcctcaaagttgac 270 ||||| |||||||||||||| Sbjct: 1258 agccaattcctcaaagttgac 1238 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 461 ttcagcaactccaacatagttcgttgcacttctctgtcaccact 504 |||| |||||||||||| || | |||||||| ||||||||||| Sbjct: 1050 ttcaacaactccaacattgtcctctgcacttccctgtcaccact 1007
>ref|XM_444885.1| Candida glabrata CBS138 hypothetical protein (CAGL0A02750g) partial mRNA Length = 1290 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 ctccaacatagttcgttgcacttctctgtcacc 501 |||||||||||||| |||||||||||| ||||| Sbjct: 906 ctccaacatagttctttgcacttctctatcacc 874
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 469 ctccaacatagttcgttgcacttctctgtcacc 501 |||||||||||||| |||||||||||| ||||| Sbjct: 288683 ctccaacatagttctttgcacttctctatcacc 288651
>emb|AL116376.1|CNS01D4W Botrytis cinerea strain T4 cDNA library Length = 540 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 341 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatcaagaatatct 400 |||||||||||||||| ||||| ||||| | ||| ||||||||||| || ||| |||| Sbjct: 75 gggaactcaatctttctatccagacgaccgggacgaagtaaagcagggtcgagagtatca 16 Query: 401 gcacg 405 ||||| Sbjct: 15 gcacg 11
>ref|XM_392722.2| PREDICTED: Apis mellifera similar to GA10280-PA (LOC409198), mRNA Length = 1683 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 443 ctaaatccatctagctgattcagcaactccaacatagttcgttgcacttctct 495 ||||||||||||| ||||| | || ||||||||||| |||||||||||||| Sbjct: 1053 ctaaatccatctaattgatttaataattccaacatagtacgttgcacttctct 1001
>ref|XM_381781.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01605.1) partial mRNA Length = 1170 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttc 492 ||||| ||||| ||||||||||||| ||| ||||| |||||||| Sbjct: 794 ccatcaagctggttcagcaactccagcatggttcgctgcacttc 751
>gb|BC005783.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 3, mRNA (cDNA clone MGC:12017 IMAGE:3603053), complete cds Length = 1534 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1308 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1258
>ref|NM_008948.1| Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 3 (Psmc3), mRNA Length = 1569 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1363 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1313
>gb|BC054164.1| Xenopus laevis proteasome (prosome, macropain) 26S subunit, ATPase 3, mRNA (cDNA clone MGC:64280 IMAGE:6873792), complete cds Length = 1454 Score = 46.1 bits (23), Expect = 0.12 Identities = 77/95 (81%) Strand = Plus / Minus Query: 182 agagcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatca 241 ||||||| ||| || |||||||||||||| || || ||| || ||||||||||| || Sbjct: 1241 agagcaatcattccggcttccacacaaactgctttgcactgagcgccattgaaatcgtcg 1182 Query: 242 gttgaacgagccagctcctcaaagttgacatcagg 276 || | ||||||||||||||| | || |||||||| Sbjct: 1181 gtacagcgagccagctcctcataattcacatcagg 1147
>emb|AJ012165.1|CAN012165 Capsicum annuum mRNA for chloroplast protease (CACP)from the AAA atpase family Length = 2233 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 392 agaatatctgcacgattggttgc 414 ||||||||||||||||||||||| Sbjct: 1170 agaatatctgcacgattggttgc 1148
>gb|DQ407622.1| Physarum polycephalum CRAC-like protein mRNA, partial cds Length = 669 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 338 tgagggaactcaatctttcggtccagg 364 ||||||||||| ||||||||||||||| Sbjct: 102 tgagggaactccatctttcggtccagg 76
>dbj|AK152018.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830045E17 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1370 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1158 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1108
>dbj|AK151370.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028L03 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1352 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1139 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1089
>dbj|AK168616.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920038K15 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1349 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1139 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1089
>dbj|AK168263.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730073O13 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1298 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1088 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1038
>dbj|AK167061.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029C15 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1577 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1364 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1314
>dbj|AK167002.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0027D13 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1573 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1367 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1317
>dbj|AK002542.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610011H11 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1353 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1140 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1090
>dbj|AK083043.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530037H08 product:proteasome (prosome, macropain) 26S subunit, ATPase 3, full insert sequence Length = 1822 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1381 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1331
>dbj|AB040858.2| Mus musculus TBP1/PSMC3 gene for proteasomal ATPase, complete cds Length = 2669 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 2363 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 2313
>emb|X80755.1|CAPFTF C.annuum mRNA for PFTF (plastid fusion and/or translation factor Length = 2197 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 392 agaatatctgcacgattggttgc 414 ||||||||||||||||||||||| Sbjct: 1148 agaatatctgcacgattggttgc 1126
>emb|AL691439.8| Mouse DNA sequence from clone RP23-263H8 on chromosome 2, complete sequence Length = 30770 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 10711 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 10661
>dbj|D49686.1| Mus musculus mRNA for Tat binding protein-1, complete cds Length = 1569 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatcagga 277 |||||||| |||||||| | ||||||||||| ||| |||| ||||||||| Sbjct: 1363 ccattgaagtcatcagtgcaccgagccagctcttcatagttcacatcagga 1313
>ref|XM_457903.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C05654g) partial mRNA Length = 1302 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 470 tccaacatagttcgttgcacttctctgtcaccac 503 ||||||||||||| ||| |||||||| ||||||| Sbjct: 911 tccaacatagttctttggacttctctttcaccac 878
>gb|AY574576.1| Cricetulus griseus ATPase 3 mRNA, partial cds Length = 461 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 gggaactcaatctttcggtccaggcg 366 |||||||||||||| ||||||||||| Sbjct: 134 gggaactcaatcttgcggtccaggcg 109
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttc 482 ||||| |||||||| |||||||||||||| |||| Sbjct: 10437293 ccatccagctgattaagcaactccaacatggttc 10437260
>ref|XM_720879.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05503) partial mRNA Length = 2364 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 ggttcaagatttaaactatattccaa 30 ||||||||||||||||||| |||||| Sbjct: 476 ggttcaagatttaaactattttccaa 451
>emb|CR682051.1|CNS0FP7Z Tetraodon nigroviridis full-length cDNA Length = 1401 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 248 cgagccagctcctcaaagttgacatc 273 ||||||||||||||| |||||||||| Sbjct: 1122 cgagccagctcctcatagttgacatc 1097
>emb|CR670119.1|CNS0FG19 Tetraodon nigroviridis full-length cDNA Length = 1359 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 248 cgagccagctcctcaaagttgacatc 273 ||||||||||||||| |||||||||| Sbjct: 1103 cgagccagctcctcatagttgacatc 1078
>emb|CR637742.2|CNS0ER1W Tetraodon nigroviridis full-length cDNA Length = 1397 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 248 cgagccagctcctcaaagttgacatc 273 ||||||||||||||| |||||||||| Sbjct: 1132 cgagccagctcctcatagttgacatc 1107
>ref|XM_502605.1| Yarrowia lipolytica CLIB122, YALI0D09119g predicted mRNA Length = 1242 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 gagggaactcaatctttcggtc 360 |||||||||||||||||||||| Sbjct: 988 gagggaactcaatctttcggtc 967
>ref|XM_502714.1| Yarrowia lipolytica CLIB122, YALI0D11770g predicted mRNA Length = 1215 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 341 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatc 390 |||||||| |||||||||||||| ||||| | ||| || | ||||||||| Sbjct: 950 gggaactcgatctttcggtccagtcgaccgggacgcagcagagcaggatc 901
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttc 482 ||||| |||||||| |||||||||||||| |||| Sbjct: 93846 ccatccagctgattaagcaactccaacatggttc 93813
>ref|XM_779058.1| PREDICTED: Strongylocentrotus purpuratus similar to for proteasomal ATPase (SUG1) (LOC578921), mRNA Length = 1244 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 gagggaactcaatctttcggtc 360 |||||||||||||||||||||| Sbjct: 960 gagggaactcaatctttcggtc 939
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 470 tccaacatagttcgttgcacttctctgtcaccac 503 ||||||||||||| ||| |||||||| ||||||| Sbjct: 465790 tccaacatagttctttggacttctctttcaccac 465823
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Minus Query: 341 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatc 390 |||||||| |||||||||||||| ||||| | ||| || | ||||||||| Sbjct: 1872819 gggaactcgatctttcggtccagacgacctggacgcagcagagcaggatc 1872770
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttc 482 ||||| |||||||| |||||||||||||| |||| Sbjct: 10435394 ccatccagctgattaagcaactccaacatggttc 10435361
>gb|AY032630.1| Oncorhynchus mykiss NADH dehydrogenase subunit 5 (ND5) and NADH dehydrogenase subunit 6 (ND6) genes, complete cds; tRNA-Glu gene, complete sequence; cytochrome b (Cytb) gene, complete cds; and tRNA-Thr and tRNA-Pro genes, complete sequence; mitochondrial genes for mitochondrial products Length = 4713 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 cttctttgcttgcacttggata 133 |||||||||||||||||||||| Sbjct: 4309 cttctttgcttgcacttggata 4288
>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full insert sequence Length = 1579 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttc 482 ||||| |||||||| |||||||||||||| |||| Sbjct: 1061 ccatccagctgattaagcaactccaacatggttc 1028
>dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C01, full insert sequence Length = 651 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttc 482 ||||| |||||||| |||||||||||||| |||| Sbjct: 72 ccatccagctgattaagcaactccaacatggttc 39
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 341 gggaactcaatctttcggtccaggcgaccagaacggagtaaagcaggatc 390 |||||||| |||||||||||||| ||||| | ||| || | ||||||||| Sbjct: 1459650 gggaactcgatctttcggtccagtcgaccgggacgcagcagagcaggatc 1459699 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 gagggaactcaatctttcggtc 360 |||||||||||||||||||||| Sbjct: 1160145 gagggaactcaatctttcggtc 1160166
>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit2b, complete cds Length = 1616 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttc 482 ||||| |||||||| |||||||||||||| |||| Sbjct: 1005 ccatccagctgattaagcaactccaacatggttc 972
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 190 catgccagcttccacacaaacagccttca 218 |||||| ||||| |||||||||||||||| Sbjct: 451612 catgcccgcttcaacacaaacagccttca 451584 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 461 ttcagcaactccaacatagttcgttgcacttctctgtcaccact 504 |||| |||||||||||| || | |||||||| ||||||||||| Sbjct: 451221 ttcaacaactccaacattgtcctctgcacttccctgtcaccact 451178
>gb|AC102127.11| Mus musculus chromosome 1, clone RP23-202A19, complete sequence Length = 196674 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactcca 473 ||||||||||||||||| ||||||| Sbjct: 59745 ccatctagctgattcagtaactcca 59721
>ref|XM_823362.1| Trypanosoma brucei TREU927 proteasome regulatory ATPase subunit 2 (Tb11.02.1220) partial mRNA Length = 1314 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 445 aaatccatctagctgattcagcaactccaacatagttcgttgcacttct 493 ||||||||| || ||| | |||||||||||||| || || ||||||||| Sbjct: 948 aaatccatcgagttgagtgagcaactccaacatggtacgctgcacttct 900
>gb|BC062817.1| Mus musculus cDNA clone IMAGE:1282081, partial cds Length = 493 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 catccctccgtagagcaagca 191 ||||||||||||||||||||| Sbjct: 187 catccctccgtagagcaagca 167
>gb|AC161749.3| Medicago truncatula chromosome 7 BAC clone mth2-182g1, complete sequence Length = 47909 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 449 ccatctagctgattcagcaactccaacat 477 ||||||| ||| ||||||||||||||||| Sbjct: 37371 ccatctaactggttcagcaactccaacat 37399
>ref|NM_010303.3| Mus musculus guanine nucleotide binding protein, alpha 13 (Gna13), mRNA Length = 6217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 catccctccgtagagcaagca 191 ||||||||||||||||||||| Sbjct: 5163 catccctccgtagagcaagca 5183
>gb|BC032937.1| Mus musculus, clone IMAGE:1379624, mRNA, partial cds Length = 1301 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 catccctccgtagagcaagca 191 ||||||||||||||||||||| Sbjct: 247 catccctccgtagagcaagca 267
>gb|AF227500.1| Trypanosoma brucei proteasome regulatory ATPase subunit 2 (Rpt2) gene, complete cds Length = 1314 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 445 aaatccatctagctgattcagcaactccaacatagttcgttgcacttct 493 ||||||||| || ||| | |||||||||||||| || || ||||||||| Sbjct: 948 aaatccatcgagttgagtgagcaactccaacatggtacgctgcacttct 900
>dbj|AK164985.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130105C18 product:unclassifiable, full insert sequence Length = 3374 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 catccctccgtagagcaagca 191 ||||||||||||||||||||| Sbjct: 2341 catccctccgtagagcaagca 2361
>gb|AC150776.2| Medicago truncatula chromosome 7 BAC clone mte1-45n16, complete sequence Length = 107886 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 449 ccatctagctgattcagcaactccaacat 477 ||||||| ||| ||||||||||||||||| Sbjct: 8529 ccatctaactggttcagcaactccaacat 8557
>dbj|AK038290.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130093H20 product:unclassifiable, full insert sequence Length = 2489 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 catccctccgtagagcaagca 191 ||||||||||||||||||||| Sbjct: 2247 catccctccgtagagcaagca 2267
>gb|AC016772.9| Homo sapiens BAC clone RP11-567N19 from 2, complete sequence Length = 176932 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 tttaaactatattccaaataaaaat 38 |||||||||||||||||||| |||| Sbjct: 21969 tttaaactatattccaaatacaaat 21993
>gb|AC008747.5|AC008747 Homo sapiens chromosome 19 clone CTD-2588C8, complete sequence Length = 159597 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ttcaagatttaaactatattc 27 ||||||||||||||||||||| Sbjct: 77033 ttcaagatttaaactatattc 77013
>gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence Length = 266544 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 atttaaactatattccaaataaaaa 37 ||||||| ||||||||||||||||| Sbjct: 107880 atttaaaatatattccaaataaaaa 107904
>gb|AF125519.1|AF125519 Brachymystax lenok mitochondrial control region, complete sequence Length = 1089 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cttctttgcttgcacttggat 132 ||||||||||||||||||||| Sbjct: 590 cttctttgcttgcacttggat 570
>dbj|AP003785.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-7N14, complete sequences Length = 164354 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 ttcttctttgcttgcacttgg 130 ||||||||||||||||||||| Sbjct: 103621 ttcttctttgcttgcacttgg 103641
>emb|CT033586.1| Platynereis dumerilii EST IB0AAA17DA06EM1 Length = 885 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 445 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 501 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 857 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 801
>emb|CT033585.1| Platynereis dumerilii EST IB0AAA17DA06FM1 Length = 820 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 445 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 501 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 555 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 611
>emb|CT033497.1| Platynereis dumerilii EST IB0AAA19BC04FM1 Length = 808 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 445 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 501 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 569 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 625
>emb|CT033264.1| Platynereis dumerilii EST IB0AAA23DB12EM1 Length = 944 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 445 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 501 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 663 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 607
>emb|CT033263.1| Platynereis dumerilii EST IB0AAA23DB12FM1 Length = 852 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 445 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 501 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 558 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 614
>emb|CT033184.1| Platynereis dumerilii EST IB0AAA25BD05EM1 Length = 900 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 445 aaatccatctagctgattcagcaactccaacatagttcgttgcacttctctgtcacc 501 ||||||||| | ||| || || |||||||||||||||| ||||| || |||||||| Sbjct: 847 aaatccatccaactggttaagtaactccaacatagttctctgcacctcactgtcacc 791
>emb|CT032307.1| Platynereis dumerilii EST IB0AAA41AA12EM1 Length = 921 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 508 ttcactgtcaaaacgctttgttcca 532 ||||||||||||||| ||||||||| Sbjct: 898 ttcactgtcaaaacgttttgttcca 874
>emb|AL645791.14| Mouse DNA sequence from clone RP23-465A12 on chromosome 11, complete sequence Length = 200883 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 catccctccgtagagcaagca 191 ||||||||||||||||||||| Sbjct: 7429 catccctccgtagagcaagca 7449
>ref|NM_001002064.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 3 (psmc3), mRNA Length = 1657 Score = 40.1 bits (20), Expect = 7.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatca 274 |||||||| |||||||| | || ||||| ||||||||||| |||||| Sbjct: 1237 ccattgaagtcatcagtacatcgtgccagttcctcaaagttcacatca 1190 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 340 agggaactcaatctttcggtccaggcgaccagaacg 375 ||||||||||||||| || ||||| ||||| ||||| Sbjct: 1124 agggaactcaatcttacgatccagacgacctgaacg 1089
>gb|DQ213632.1| Taeniopygia guttata clone 0058P0031F04 proteasome 26S ATPase subunit 3-like mRNA, complete sequence Length = 730 Score = 40.1 bits (20), Expect = 7.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 197 gcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagc 256 ||||| ||||| |||||||| ||| || |||||||||||||| || | |||||||| Sbjct: 495 gcttcaacacacacagccttgcactgggctccattgaaatcatctgtgcagcgagccagt 436 Query: 257 tcctcaaagttgacatcagg 276 |||||| |||| || ||||| Sbjct: 435 tcctcatagtttacgtcagg 416
>gb|DQ213631.1| Taeniopygia guttata clone 0058P0048B04 proteasome 26S ATPase subunit 3-like mRNA, complete sequence Length = 732 Score = 40.1 bits (20), Expect = 7.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 197 gcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacgagccagc 256 ||||| ||||| |||||||| ||| || |||||||||||||| || | |||||||| Sbjct: 498 gcttcaacacacacagccttgcactgggctccattgaaatcatctgtgcagcgagccagt 439 Query: 257 tcctcaaagttgacatcagg 276 |||||| |||| || ||||| Sbjct: 438 tcctcatagtttacgtcagg 419
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ttccaaataaaaatggtaccgagt 48 ||||| |||||||||||||||||| Sbjct: 31958 ttccatataaaaatggtaccgagt 31935
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ttccaaataaaaatggtaccgagt 48 ||||| |||||||||||||||||| Sbjct: 71185 ttccatataaaaatggtaccgagt 71162
>gb|AY737534.1| Toxoptera citricida putative 26S protease regulatory subunit 8 mRNA, complete cds Length = 1227 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 449 ccatctagctgattcagcaactccaacatagttcgttgcacttc 492 ||||| || ||||| |||| |||||||||||||| ||| ||||| Sbjct: 851 ccatcaagttgattgagcagctccaacatagttctttgtacttc 808
>gb|AC131767.4| Mus musculus BAC clone RP24-284N10 from chromosome 12, complete sequence Length = 150631 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cacacaaacagccttcagct 221 |||||||||||||||||||| Sbjct: 107205 cacacaaacagccttcagct 107224
>ref|XM_323766.1| Neurospora crassa OR74A hypothetical protein (NCU04414.1) partial mRNA Length = 1389 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 185 gcaagcatgccagcttccacacaaacagccttcagc 220 |||| ||||||||| || ||||| |||||||||||| Sbjct: 1289 gcaatcatgccagcctcgacacacacagccttcagc 1254
>ref|XM_952398.1| Neurospora crassa OR74A hypothetical protein (NCU04414.1) partial mRNA Length = 1389 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 185 gcaagcatgccagcttccacacaaacagccttcagc 220 |||| ||||||||| || ||||| |||||||||||| Sbjct: 1289 gcaatcatgccagcctcgacacacacagccttcagc 1254
>ref|XM_855649.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50), transcript variant 3 (LOC475980), mRNA Length = 1197 Score = 40.1 bits (20), Expect = 7.2 Identities = 71/88 (80%) Strand = Plus / Minus Query: 190 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 249 |||||| || |||||||| || ||||| ||| || |||||||| ||||| || | || Sbjct: 1018 catgcccgcctccacacacacggccttgcactgggccccattgaagtcatccgtacagcg 959 Query: 250 agccagctcctcaaagttgacatcagga 277 |||||||||||| |||| ||||||||| Sbjct: 958 ggccagctcctcatagttcacatcagga 931
>ref|XM_533187.2| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50), transcript variant 1 (LOC475980), mRNA Length = 1304 Score = 40.1 bits (20), Expect = 7.2 Identities = 71/88 (80%) Strand = Plus / Minus Query: 190 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 249 |||||| || |||||||| || ||||| ||| || |||||||| ||||| || | || Sbjct: 1125 catgcccgcctccacacacacggccttgcactgggccccattgaagtcatccgtacagcg 1066 Query: 250 agccagctcctcaaagttgacatcagga 277 |||||||||||| |||| ||||||||| Sbjct: 1065 ggccagctcctcatagttcacatcagga 1038
>ref|XM_855582.1| PREDICTED: Canis familiaris similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Proteasome subunit P50), transcript variant 2 (LOC475980), mRNA Length = 1369 Score = 40.1 bits (20), Expect = 7.2 Identities = 71/88 (80%) Strand = Plus / Minus Query: 190 catgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatcagttgaacg 249 |||||| || |||||||| || ||||| ||| || |||||||| ||||| || | || Sbjct: 1190 catgcccgcctccacacacacggccttgcactgggccccattgaagtcatccgtacagcg 1131 Query: 250 agccagctcctcaaagttgacatcagga 277 |||||||||||| |||| ||||||||| Sbjct: 1130 ggccagctcctcatagttcacatcagga 1103
>ref|XM_388241.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08065.1) partial mRNA Length = 1074 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 atcctctcatcactgctaaatcca 451 ||||||||| |||||||||||||| Sbjct: 974 atcctctcaacactgctaaatcca 951
>gb|AC140788.4| Mus musculus BAC clone RP23-452K24 from chromosome 2, complete sequence Length = 181527 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 actgctaaatccatctagct 458 |||||||||||||||||||| Sbjct: 163220 actgctaaatccatctagct 163201
>gb|BC046948.1| Xenopus laevis hypothetical protein MGC53343, mRNA (cDNA clone MGC:53343 IMAGE:5570999), complete cds Length = 3107 Score = 40.1 bits (20), Expect = 7.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 182 agagcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatca 241 ||||||| ||| || |||||||| ||||| || || |||||| ||||||||||| || Sbjct: 1398 agagcaatcattccggcttccacgcaaactgctttgcactgtgcgccattgaaatcgtcg 1339 Query: 242 gttgaacgagccagctcctc 261 || ||||||| |||||||| Sbjct: 1338 gtacaacgagcaagctcctc 1319
>emb|AL354828.12| Human DNA sequence from clone RP11-274P12 on chromosome 13 Contains a ferritin heavy polypeptide 1 (FTH1) pseudogene and a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 39 (DDX39) (DDXL, MGC8471, MGC8203) pseudogene, complete sequence Length = 168114 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ttgcacttggataatgcctt 140 |||||||||||||||||||| Sbjct: 48518 ttgcacttggataatgcctt 48537
>emb|AL078595.12|HSDJ399J4 Human DNA sequence from clone RP3-399J4 on chromosome 6q15-16.3 Contains a cytochrome B pseudogene and a ribosomal protein (RPL7A) pseudogene, complete sequence Length = 124280 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aactatattccaaataaaaa 37 |||||||||||||||||||| Sbjct: 25733 aactatattccaaataaaaa 25752
>emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid contig G21B4 Length = 177225 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 185 gcaagcatgccagcttccacacaaacagccttcagc 220 |||| ||||||||| || ||||| |||||||||||| Sbjct: 169819 gcaatcatgccagcctcgacacacacagccttcagc 169854
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 actatattccaaataaaaatggta 42 |||||||| ||||||||||||||| Sbjct: 51843 actatatttcaaataaaaatggta 51866
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 actatattccaaataaaaatggta 42 |||||||| ||||||||||||||| Sbjct: 186815 actatatttcaaataaaaatggta 186838
>emb|AJ421478.1| Mus musculus X-inactivation center region; segment 1/3 Length = 247850 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 aaactatattccaaataaaa 36 |||||||||||||||||||| Sbjct: 246850 aaactatattccaaataaaa 246831
>gb|U58750.1| Caenorhabditis elegans cosmid F55G1, complete sequence Length = 37354 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ttgaacgagccagctcctca 262 |||||||||||||||||||| Sbjct: 14735 ttgaacgagccagctcctca 14754
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 aaagcaggatcaagaatatc 399 |||||||||||||||||||| Sbjct: 393782 aaagcaggatcaagaatatc 393763 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 aaagcaggatcaagaatatc 399 |||||||||||||||||||| Sbjct: 233112 aaagcaggatcaagaatatc 233093
>ref|NM_079745.2| Drosophila melanogaster Proteasome 26S subunit subunit 4 ATPase CG5289-RA (Pros26.4), mRNA Length = 1631 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 ctgattcagcaactccaacatagt 480 ||||||||| |||||||||||||| Sbjct: 1141 ctgattcagtaactccaacatagt 1118
>gb|AY058759.1| Drosophila melanogaster SD02658 full length cDNA Length = 1493 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 ctgattcagcaactccaacatagt 480 ||||||||| |||||||||||||| Sbjct: 1025 ctgattcagtaactccaacatagt 1002
>ref|NM_068799.3| Caenorhabditis elegans ROD (Drosophila RoughDeal) homolog family member (rod-1) (rod-1) mRNA, complete cds Length = 6333 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ttgaacgagccagctcctca 262 |||||||||||||||||||| Sbjct: 356 ttgaacgagccagctcctca 375
>gb|AC021887.4|AC021887 Homo sapiens BAC clone RP11-777M17 from 12, complete sequence Length = 194497 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atggatcacctctgtagcat 173 |||||||||||||||||||| Sbjct: 160818 atggatcacctctgtagcat 160799
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ttccaaataaaaatggtaccgagt 48 ||||| |||||||||||||||||| Sbjct: 21478102 ttccatataaaaatggtaccgagt 21478079
>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone BACR05C11, complete sequence Length = 171376 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 ctgattcagcaactccaacatagt 480 ||||||||| |||||||||||||| Sbjct: 95758 ctgattcagtaactccaacatagt 95781
>gb|AC009961.11| Homo sapiens BAC clone RP11-357L2 from 2, complete sequence Length = 216571 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tatattccaaataaaaatggtacc 44 ||||||||||||||||||| |||| Sbjct: 91243 tatattccaaataaaaatgttacc 91220
>gb|AC084559.1|CBRG35L02 Caenorhabditis briggsae cosmid G35L02, complete sequence Length = 42112 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 457 ctgattcagcaactccaacatagttcgttgcacttc 492 |||||| |||||||||||||| |||| |||||||| Sbjct: 38460 ctgattgagcaactccaacattgttctctgcacttc 38495
>gb|AC146612.2| Mus musculus BAC clone RP23-56K8 from chromosome 5, complete sequence Length = 167356 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ttcttgagtgaatttgcaaa 310 |||||||||||||||||||| Sbjct: 143095 ttcttgagtgaatttgcaaa 143076
>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence Length = 199101 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 gacttcttctttgcttgcacttgg 130 ||||||||||||||||| |||||| Sbjct: 176331 gacttcttctttgcttgtacttgg 176354
>dbj|AK173395.1| Ciona intestinalis cDNA, clone:cilv028p09, full insert sequence Length = 2192 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 185 gcaagcatgccagcttccacacaaacagccttcagctgtgcaccattgaaatcatc 240 |||| ||| |||||||| ||||||||||| || || || || ||||| |||||||| Sbjct: 1913 gcaatcataccagcttcaacacaaacagctttaagttgagctccattaaaatcatc 1858
>emb|AL929262.22| Mouse DNA sequence from clone RP23-452K24 on chromosome 2, complete sequence Length = 145652 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 actgctaaatccatctagct 458 |||||||||||||||||||| Sbjct: 127345 actgctaaatccatctagct 127326
>gb|BC071390.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 3, mRNA (cDNA clone MGC:86713 IMAGE:6896890), complete cds Length = 1657 Score = 40.1 bits (20), Expect = 7.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 227 ccattgaaatcatcagttgaacgagccagctcctcaaagttgacatca 274 |||||||| |||||||| | || ||||| ||||||||||| |||||| Sbjct: 1237 ccattgaagtcatcagtacatcgtgccagttcctcaaagttcacatca 1190 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 340 agggaactcaatctttcggtccaggcgaccagaacg 375 ||||||||||||||| || ||||| ||||| ||||| Sbjct: 1124 agggaactcaatcttacgatccagacgacctgaacg 1089
>gb|AC154412.3| Mus musculus BAC clone RP24-225G4 from 14, complete sequence Length = 182048 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 gacttcttctttgcttgcacttgg 130 ||||||||||||||||| |||||| Sbjct: 30025 gacttcttctttgcttgtacttgg 30048
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete sequence Length = 230236 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 ctgattcagcaactccaacatagt 480 ||||||||| |||||||||||||| Sbjct: 128650 ctgattcagtaactccaacatagt 128673
>gb|AF092505.1|AF092505 Mus musculus dipeptidyl aminopeptidase-like protein 6 (Dpp6) gene, partial cds; and proximal Rump white inversion breakpoint Length = 29547 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ttcttgagtgaatttgcaaa 310 |||||||||||||||||||| Sbjct: 13092 ttcttgagtgaatttgcaaa 13111
>gb|U39303.1|DMU39303 Drosophila melanogaster 26S proteasome subunit 4 ATPase mRNA, complete cds Length = 1497 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 ctgattcagcaactccaacatagt 480 ||||||||| |||||||||||||| Sbjct: 1048 ctgattcagtaactccaacatagt 1025
>emb|AL683845.15| Mouse DNA sequence from clone RP23-423B1 on chromosome X, complete sequence Length = 134201 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aaactatattccaaataaaa 36 |||||||||||||||||||| Sbjct: 56710 aaactatattccaaataaaa 56729
>emb|AL669981.11| Mouse DNA sequence from clone RP23-335B9 on chromosome 4, complete sequence Length = 222981 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gagccagctcctcaaagttg 268 |||||||||||||||||||| Sbjct: 52314 gagccagctcctcaaagttg 52295
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 actatattccaaataaaaatggta 42 |||||||| ||||||||||||||| Sbjct: 25797 actatatttcaaataaaaatggta 25774 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,834,185 Number of Sequences: 3902068 Number of extensions: 4834185 Number of successful extensions: 86716 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 86102 Number of HSP's gapped (non-prelim): 591 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
