ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart31c07 |
|---|---|
| Clone Library Name | barley_pub |
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 115 bits (288), Expect = 6e-26 Identities = 58/97 (59%), Positives = 72/97 (74%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPTE 296 C DELR+S A+D+VKRV GS VPVLDGE+ SVR+LV HSIV+SFA GGR TSR YPT Sbjct: 567 CQDELRASKANDLVKRVYGSLVPVLDGENLSVRILVDHSIVESFAQGGRTCITSRVYPTR 626 Query: 295 AIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHIY 185 AIY +A V+LFNNAT V A+ + + ++S+Y Y Sbjct: 627 AIYDSARVFLFNNATHAHVKAKSVKIWQLNSAYIRPY 663
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 108 bits (270), Expect = 7e-24 Identities = 56/81 (69%), Positives = 62/81 (76%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPTE 296 C D+ RSS ASDV K V GS VPVL GE S+R+LV HSIV+SFA GGR TSR YPT Sbjct: 561 CADQSRSSTASDVDKEVYGSDVPVLHGESLSMRLLVDHSIVESFAQGGRTVITSRVYPTR 620 Query: 295 AIYAAAGVYLFNNATGTSVTA 233 AIY+AA V+LFNNATG SVTA Sbjct: 621 AIYSAARVFLFNNATGVSVTA 641
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 107 bits (267), Expect = 2e-23 Identities = 56/93 (60%), Positives = 70/93 (75%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPTE 296 C D+ RSS A+DV K++ GS VPVL GE FS+R+LV HSIV+SFA GGR TSR YPT+ Sbjct: 546 CSDQSRSSQANDVRKQIFGSVVPVLKGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTK 605 Query: 295 AIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSY 197 AIY AA ++LFNNAT +VTA L V M+S++ Sbjct: 606 AIYGAARLFLFNNATEATVTA-SLKVWQMNSAF 637
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 106 bits (264), Expect = 3e-23 Identities = 57/100 (57%), Positives = 71/100 (71%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPTE 296 C D+ RSS A+DV K++ GS VPVL+GE S+R+LV HSIV+SFA GGR TSR YPT Sbjct: 538 CSDQSRSSLANDVHKQIYGSVVPVLEGEKLSLRILVDHSIVESFAQGGRTCITSRVYPTR 597 Query: 295 AIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHIYTDD 176 AIY AA ++LFNNA T+VTA L V M+S++ Y D Sbjct: 598 AIYGAARLFLFNNAIETNVTA-SLKVWQMNSAFIRPYHPD 636
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 104 bits (260), Expect = 1e-22 Identities = 53/93 (56%), Positives = 70/93 (75%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPTE 296 C D+ RSS +DV K++ G+ VPVL+GE FS+R+LV HSIV+SFA GGR TSR YPT+ Sbjct: 548 CSDQSRSSQPNDVRKQIFGNIVPVLEGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTK 607 Query: 295 AIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSY 197 AIY AA ++LFNNAT +VTA L + M+S++ Sbjct: 608 AIYGAARLFLFNNATEATVTA-SLKIWQMNSAF 639
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 101 bits (252), Expect = 9e-22 Identities = 51/81 (62%), Positives = 62/81 (76%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPTE 296 C D+ RSS A V K+V GS+VPVLDGE S+R+LV HSIV+SFA GGR TSR YPT+ Sbjct: 536 CADQTRSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTK 595 Query: 295 AIYAAAGVYLFNNATGTSVTA 233 A+ AA +++FNNATG SVTA Sbjct: 596 AVNGAARLFVFNNATGASVTA 616
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 98.6 bits (244), Expect = 7e-21 Identities = 49/81 (60%), Positives = 60/81 (74%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPTE 296 C D+ RSS A V K+V GS+VPVLDGE +R+LV HSIV+SFA GGR TSR YPT+ Sbjct: 540 CADQTRSSEAPGVAKQVYGSSVPVLDGEKHRMRLLVDHSIVESFAQGGRTVITSRIYPTK 599 Query: 295 AIYAAAGVYLFNNATGTSVTA 233 A+ AA +++FNNATG VTA Sbjct: 600 AVNGAARLFVFNNATGAIVTA 620
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 62.4 bits (150), Expect = 6e-10 Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGED--FSVRVLVGHSIVQSFAMGGRLTATSRAYP 302 C D RSS +DV K G V V +D S+R L+ HS+++SF GGR T+R YP Sbjct: 420 CTDLTRSSTKADVYKDAYGGFVDVDIQKDKSISLRTLIDHSMIESFGGGGRACITTRVYP 479 Query: 301 TEAIYAAAGVYLFNNATGTSVTAEKLIVHDM 209 A +++ +Y+FNN +GT V KL +M Sbjct: 480 EHAATSSSHLYVFNNGSGT-VNVSKLEAWEM 509
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 55.1 bits (131), Expect = 9e-08 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVP--VLDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYP 302 C D +SS + V K G V + D + S+R L+ HS+V+SF GGR T+R YP Sbjct: 478 CTDLTKSSTRAGVYKPAYGGFVDMDIDDHKTISLRTLIDHSVVESFGGGGRACITARVYP 537 Query: 301 TEAIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHIYTDD 176 +++ +Y+FNN + +V KL D+ ++ ++ D Sbjct: 538 EHVATSSSHLYVFNNGS-DAVKVAKLEAWDLATATVNVVVGD 578
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 53.1 bits (126), Expect = 3e-07 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGED--FSVRVLVGHSIVQSFAMGGRLTATSRAYP 302 C D RS+ + V K G V + +D S+R L+ HSIV+SF GGR T+R YP Sbjct: 482 CTDLTRSTSRAGVYKPSHGGFVDIDIEKDRAISLRTLIDHSIVESFGGGGRTCMTARVYP 541 Query: 301 TEAIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHIYTDDDLVVVG 158 ++ +Y+FNNA+ +V KL ++ ++ + DD L+ G Sbjct: 542 EHVATGSSHLYVFNNAS-DAVKVSKLEAWELATASVNA-GDDGLISYG 587
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 51.2 bits (121), Expect = 1e-06 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Frame = -1 Query: 475 CHDELRSSHASD-VVKRVVGSTVPV-LDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYP 302 C D RSS ++ + K V V L + S+R L+ +S+V+SF GR TSR YP Sbjct: 494 CSDAKRSSTTAEGLYKPPFAGYVDVDLSDKKISLRSLIDNSVVESFGAHGRTCITSRVYP 553 Query: 301 TEAIYAAAGVYLFNNATGTSVTAEKL 224 AIY A V++FNN T ++T + L Sbjct: 554 KIAIYNNAHVFVFNNGT-EAITIDSL 578
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 51.2 bits (121), Expect = 1e-06 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLDGED--FSVRVLVGHSIVQSFAMGGRLTATSRAYP 302 C D RSS + + V V D S+R L+ +S+V+SF G+ +SR YP Sbjct: 496 CSDATRSSLKEGLYRPSFAGFVDVDLATDKKISLRSLIDNSVVESFGAKGKTCISSRVYP 555 Query: 301 TEAIYAAAGVYLFNNATGTSVTAEKL 224 T A+Y A +Y+FNN + T +T E L Sbjct: 556 TLAVYENAHLYVFNNGSET-ITVENL 580
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 50.8 bits (120), Expect = 2e-06 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPV-LDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPT 299 C D RSS A + K V V L + S+R L+ +S+V+SF + +SR YPT Sbjct: 488 CSDAKRSSLAEGLYKPSFRGFVDVDLSDKKISLRSLIDNSVVESFGAQRKNLISSRVYPT 547 Query: 298 EAIYAAAGVYLFNNATGTSVTAEKLIVHDMDS 203 AIY A +++FNN T +T + L M+S Sbjct: 548 LAIYNNAHLFVFNNGT-EPITVDNLDAWSMNS 578
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPV-LDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPT 299 C D +SS + D+ K V + S+R L+ S+V+SF GG+ SR YP+ Sbjct: 481 CTDPTKSSLSPDLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPS 540 Query: 298 EAIYAAAGVYLFNN 257 AI A +Y+FNN Sbjct: 541 MAIGDKAHLYVFNN 554
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPV--LDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYP 302 C+D RSS+ S + + V V + ++R L+ HS+V+SF G+ +R YP Sbjct: 488 CNDPTRSSYESKIYRPTFAGFVDVDIAKNKQIALRTLIDHSVVESFGARGKTCILTRVYP 547 Query: 301 TEAIYAAAGVYLFNN 257 +A+ A +++FNN Sbjct: 548 RKAVGDDAHLFVFNN 562
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 47.0 bits (110), Expect = 3e-05 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPV-LDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPT 299 C D +SS + D+ K V + ++R L+ S+V+SF GG+ SR YP+ Sbjct: 494 CTDPTKSSLSPDLYKPTFAGFVDADISSGKITLRSLIDRSVVESFGAGGKTCILSRVYPS 553 Query: 298 EAIYAAAGVYLFNNATGTSVTAEKLIVHDM 209 A+ A +Y+FNN VT L +M Sbjct: 554 IAVGKDAHLYVFNNGE-VDVTVSGLTAWEM 582
>INV1_PEA (Q43089) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Acid invertase) Length = 555 Score = 44.3 bits (103), Expect = 2e-04 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPVLD-GEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPT 299 C D+ RSS D G+ V V E S+R L+ HS+V+SF GR T+R YPT Sbjct: 481 CSDQSRSSLNKDNDMTSYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACVTARVYPT 540 Query: 298 EAIYAAA 278 AI+ A Sbjct: 541 LAIHDKA 547
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -1 Query: 475 CHDELRSSHASDVVKRVVGSTVPV-LDGEDFSVRVLVGHSIVQSFAMGGRLTATSRAYPT 299 C D +SS ++ + V + S+R L+ S+V+SF GG+ SR YP+ Sbjct: 501 CTDPTKSSRNPNMYQPTFAGFVDTDITNGKISLRSLIDRSVVESFGAGGKACILSRVYPS 560 Query: 298 EAIYAAAGVYLFNN 257 AI A +Y+FNN Sbjct: 561 LAIGKNARLYVFNN 574
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 42.0 bits (97), Expect = 8e-04 Identities = 19/47 (40%), Positives = 26/47 (55%) Frame = -1 Query: 385 SVRVLVGHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYLFNNATGT 245 S+R L+ S V+SF GGR +R YP + A +Y FNN + T Sbjct: 523 SLRTLIDRSAVESFGGGGRACIMARVYPAAVVDGATHMYAFNNGSST 569
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 31.2 bits (69), Expect = 1.4 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 6/111 (5%) Frame = +3 Query: 129 STTSCKRS-A*PTTTKSSSVYIWLYDESISCTMSFSAVTLVPVALLNR*TPAAA*MASVG 305 +TTS K S + PT+T SS+ S S T+S ++ T + + T + +S Sbjct: 181 TTTSTKLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSS-TLISTSTSSSS 239 Query: 306 YALDVAVNLPPIAKLWTMEWPTSTRT----EKSSPSSTGTVLPT-TRFTTS 443 + + PI+ T TST T S+P+S+ PT T FTT+ Sbjct: 240 SSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTT 290 Score = 28.5 bits (62), Expect = 9.2 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 3/96 (3%) Frame = +3 Query: 165 TTKSSSVYIWLYDESISCTMSFSAV---TLVPVALLNR*TPAAA*MASVGYALDVAVNLP 335 T+ SSVY+ SI+ + S S V T+ P TP S + D+ LP Sbjct: 123 TSTESSVYV--SSSSITSSSSTSIVDTTTISPTLTSTSTTPLTTASTSTTPSTDITSALP 180 Query: 336 PIAKLWTMEWPTSTRTEKSSPSSTGTVLPTTRFTTS 443 TST+ S P+ST + TT T+S Sbjct: 181 TT---------TSTKLSTSIPTSTTSSTSTTTSTSS 207
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +3 Query: 363 WPTSTRTEKSSPSSTGTVLPTTRFTTSLACDDRNSS 470 WP+ST + SS +ST T TTR TT+ R ++ Sbjct: 402 WPSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTT 437
>POP8_SCHPO (Q7Z996) Probable ribonucleases P protein subunit pop8 (EC| 3.1.26.5) Length = 108 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 Query: 472 HDELRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVGHSIVQSFAMGG 332 H L+S S ++ VVG T P+ + +D S+R L+ ++ QSF + G Sbjct: 4 HQRLKSEW-SYIILEVVGGTTPIDEIDDISLRHLITLALNQSFGIFG 49
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 30.4 bits (67), Expect = 2.4 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 1/112 (0%) Frame = +3 Query: 108 SHRPSNQSTTSCKRSA*PTTTKSSSVYIWLYDESISCTMSFSAVTLVPVALLNR*TPA-A 284 +H S+ STTS S+ TTT SSS S S T + S + +P+ Sbjct: 162 THSSSSSSTTSTTTSSSETTTSSSS------SSSSSSTSTTSTTSTTSSTTSTSSSPSTT 215 Query: 285 A*MASVGYALDVAVNLPPIAKLWTMEWPTSTRTEKSSPSSTGTVLPTTRFTT 440 + S + + + + + TST T S+PSST ++ +T +TT Sbjct: 216 SSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSST-SIGTSTHYTT 266
>TYDC3_PAPSO (P54770) Tyrosine/DOPA decarboxylase 3 [Includes: DOPA| decarboxylase (EC 4.1.1.28) (DDC); Tyrosine decarboxylase (EC 4.1.1.25)] Length = 533 Score = 30.0 bits (66), Expect = 3.2 Identities = 14/47 (29%), Positives = 25/47 (53%) Frame = -1 Query: 331 RLTATSRAYPTEAIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNH 191 ++ AT Y T A+ GVY+ A G+++T E+ ++H + H Sbjct: 474 QVKATGSVYMTHAV--VGGVYMIRFAVGSTLTEERHVIHAWEVLQEH 518
>YMH1_CAEEL (P34468) Hypothetical protein F58A4.1| Length = 254 Score = 29.3 bits (64), Expect = 5.4 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +3 Query: 369 TSTRTEKSSPSSTGTVLPTTRFTTS 443 TST T S+ ST TV PTTR +T+ Sbjct: 105 TSTSTSTSTSRSTSTVTPTTRSSTT 129
>Y2028_ARCFU (O28251) Hypothetical protein AF2028| Length = 607 Score = 29.3 bits (64), Expect = 5.4 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = -1 Query: 367 GHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYLFNNATGTSVTAEKLIVHDMDSSYNHI 188 G I+ FA+G +++ P + V + N ATG + + + V D +YN I Sbjct: 285 GTKIIDVFAIGNASIGVNKSGPDNSNQWTGNVTIKNTATGLTYIVKSVKVWATDRNYNEI 344
>PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)| Length = 1244 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +1 Query: 364 GPRAPGQKSPRRRAPALCYPPPASPHR 444 GP P SP +P+L PPP+ PHR Sbjct: 941 GPPTPASHSP---SPSLPPPPPSPPHR 964
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/35 (48%), Positives = 18/35 (51%) Frame = +1 Query: 361 SGPRAPGQKSPRRRAPALCYPPPASPHR*HVMTAT 465 SG R P P RR PA PP PHR HV + T Sbjct: 337 SGVRLPAPPPPPRRGPA----PPPPPHR-HVTSNT 366 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,487,967 Number of Sequences: 219361 Number of extensions: 1213649 Number of successful extensions: 4368 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3970 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4355 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
