>PGK_MYCPU (Q98QW4) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 771

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
 Frame = +1

Query: 37  FRILSKPINSNKTLIQ------NFRNEKAKTPNVQTPHK*AKLKLRDSTNAAQTPSNEHD 198
           F  L  P   N TL +      NF  +  +TPN+QT +          T+  +T + E  
Sbjct: 623 FEDLETPETQNTTLEEVALETSNFEAQNLETPNLQTSN--------FETSNLETSNFETS 674

Query: 199 HRSQSAF--LETSDFAAPSSSSEDRSL 273
           +   S F    T +F+ PSS+ ED  L
Sbjct: 675 NFETSTFESFNTGNFSTPSSTFEDLDL 701

>ERFB_EMENI (Q5B3W7) Palmitoyltransferase erf2 (EC 2.3.1.-) (DHHC cysteine-rich|
           domain-containing protein erf2) (Ras protein
           acyltransferase)
          Length = 601

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
 Frame = +1

Query: 43  ILSKPINSNKTLIQNFRNEKAKTPNV-----QTPHK*AKLKLRDSTNAAQTPSNEHDHRS 207
           I+   I+SN +   N    ++++ N+     + PH   K+  +  TN  +TP      RS
Sbjct: 172 IIPDRIHSNASPTANTTTVRSESANLIRDRERPPHLNLKVDYK-GTNENETPE-----RS 225

Query: 208 QSAFLETSDFAAPSSSSEDRSLARLASA 291
             +FL   +  AP+ + + R+ ARL+SA
Sbjct: 226 PLSFLSLQNRNAPADNRDSRAHARLSSA 253

>FLIF_BORBU (Q44912) Flagellar M-ring protein|
          Length = 569

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -3

Query: 422 FGRYLAVANLVYFSINLFVFLIPKFLPRAFEKYFHTRDEVYAKTAEAKRARDLSSLDDD 246
           F  +L +A++V FS+ + VF I   + R  E+    R+E  AK A  +R + L    DD
Sbjct: 469 FKYFLFIASIV-FSLLILVFTIFFAISRELERRRRLREEELAKQAHLRRQQALMDGGDD 526

>VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (VTG I) [Contains:|
            Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2
            (LV2)]
          Length = 1704

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 23/108 (21%), Positives = 52/108 (48%)
 Frame = +1

Query: 49   SKPINSNKTLIQNFRNEKAKTPNVQTPHK*AKLKLRDSTNAAQTPSNEHDHRSQSAFLET 228
            S   +S+ +     R+ ++ + +  +     K+ L   TN++ + S+     S S+   +
Sbjct: 1082 SSSSSSSSSSSSESRSSRSSSSSSSSSRSSRKIDLAARTNSSSSSSSRRSRSSSSSSSSS 1141

Query: 229  SDFAAPSSSSEDRSLARLASAVFAYTSSRVWKYFSNARGRNLGIRKTN 372
            S  ++ SSSS  RS +  +S+  + +SSR  +  ++ R  +   R ++
Sbjct: 1142 SSSSSSSSSSSRRSSSSSSSS--SSSSSRSSRRVNSTRSSSSSSRTSS 1187

>ATI_CAMPC (Q05482) A-type inclusion protein (ATI)|
          Length = 726

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 320 HTRDEVYAKTAEAKRARDLSSLDDDGAAKSEVSKK 216
           H  + +   T E K  RD+ +  DDG+  SE+ KK
Sbjct: 458 HKTERIDRLTKEIKELRDIQNGTDDGSDSSEIDKK 492

>KPSH1_PINFU (Q4KTY1) Serine/threonine-protein kinase H1 homolog (EC 2.7.11.1)|
          Length = 415

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 61  NSNKTLIQNFRNEKAKTPNVQTPH--K*AKLKLRDSTNAAQTPSNEHDHRSQSAFLETSD 234
           + N+ +++ F NE+ K  N Q PH  +  +   +D  NA   P  +  +R    + +  D
Sbjct: 14  SGNQAVVEVFNNERNKEYNRQNPHQNRGPRDPTKDPKNAGPPPEGQRSNRKVKKYRDKFD 73

>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase XNP) (X-linked nuclear protein)
           (dXNP) (d-xnp)
          Length = 1311

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = +1

Query: 55  PINSNKTLIQNFRNEKAKTPNVQTPHK*AKLKLRDSTNAAQTPSNEHDHRSQSAFLETSD 234
           P    + +++  R    KT   Q P K +     DS  AA T       RS+S     SD
Sbjct: 239 PPRPKRCVVRLKRVSLPKTKPAQKPKKMSS----DSEEAATTSKKSRQRRSKSESEADSD 294

Query: 235 FAAPSSSSED 264
           + AP++  E+
Sbjct: 295 YEAPAAEEEE 304

>CHR1_SCHPO (O59732) Chitin synthase regulatory factor 1 (Chs four homolog 4)|
          Length = 456

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = +1

Query: 181 PSNEHDHRSQSAFLETSDFAAPSSSSEDRSLARLASAVFAYTSSRVWKYFSNARGRNLGI 360
           P   H H S++  L +  ++      ED S   LA  VFA  +SRV +  + A    + +
Sbjct: 172 PHGIHRHVSRAKRLLSKFYSKFHHKKEDSSFDPLAPLVFAPNTSRVLRVTNEANASAISL 231

Query: 361 RKTNRL 378
            K   L
Sbjct: 232 EKATSL 237

>ATI1_VARV (P34011) 81 kDa A-type inclusion protein (ATI)|
          Length = 702

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
 Frame = -3

Query: 314 RDEVYAK------TAEAKRARDLSSLDDDGAAKSEVSKK 216
           RD VY        T E K  RD+ +  DDG+  SE+ KK
Sbjct: 454 RDSVYKTERIDRLTKEIKELRDIQNGTDDGSDSSEIDKK 492

>CDC12_SCHPO (Q10059) Cell division control protein 12|
          Length = 1841

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +1

Query: 25  FI*DFRILSKPINS-NKTLIQNFRNEKAKTPNVQTPHK*AKLKLRDSTNAAQTPSNEHDH 201
           ++  F   SK  NS NK  +QN +    KTP   T H+  K    + T+   + S EH H
Sbjct: 66  YVKQFTFSSKEYNSHNKHALQNSQLPLPKTPEKSTVHR-PKANKVEVTDLPSSSSVEHLH 124

Query: 202 RSQ 210
            S+
Sbjct: 125 TSK 127

>ZC11A_HUMAN (O75152) Zinc finger CCCH-type domain-containing protein 11A|
          Length = 810

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +3

Query: 120 TNTAQVSEVEAKR---QYERSSNTEQRTRSSISVGLLGDLGFCRTIIIERGQISSPLGLR 290
           T    +++++ KR     E+    +Q    S+   L GD+  C T + E+  +++  G+ 
Sbjct: 546 TTGVDITKIQVKRCETMREKHMQKQQEREKSVLTPLRGDVASCNTQVAEKPVLTAVPGIT 605

Query: 291 RLRIHLVARV 320
           R   HL  R+
Sbjct: 606 R---HLTKRL 612

>Y266_MYCPN (P75509) Hypothetical protein MG127 homolog (A65_orf145)|
          Length = 145

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 320 HTRDEVYAKTAEAKRARDLSSLDDDGAAKSEVSKKAD 210
           +T +  Y K    KR RD+ SL +DG  +S  SK+AD
Sbjct: 38  YTIENFYKKPISDKRFRDILSLSEDG-TESLFSKRAD 73

>ATI_COWPX (P16602) A-type inclusion protein (ATI)|
          Length = 1284

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
 Frame = -3

Query: 314 RDEVYAK------TAEAKRARDLSSLDDDGAAKSEVSKK 216
           RD VY        T E K  RD+ +  DDG+  SE+ KK
Sbjct: 455 RDSVYKTERIDRLTKEIKELRDIQNGTDDGSDSSEIDKK 493

>ARSJ_MOUSE (Q8BM89) Arylsulfatase J precursor (EC 3.1.6.-) (ASJ)|
          Length = 598

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 449 PVQHKAWVWFGRYLAVANLVYFSI 378
           P+  +AW W G++LA+  L  FS+
Sbjct: 12  PLSPQAWAWSGKFLAMGALAGFSV 35

>ZC11A_PONPY (Q5REG6) Zinc finger CCCH-type domain-containing protein 11A|
          Length = 811

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +3

Query: 120 TNTAQVSEVEAKR---QYERSSNTEQRTRSSISVGLLGDLGFCRTIIIERGQISSPLGLR 290
           T    ++ ++ KR     E+    +Q    S+   L GD+  C T + E+  +++  G+ 
Sbjct: 547 TTGVDITNIQVKRCETMREKHMQKQQEREKSVLTPLRGDVASCNTQVAEKPVLTAVPGIT 606

Query: 291 RLRIHLVARV 320
           R   HL  R+
Sbjct: 607 R---HLTKRL 613

>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 151 LRDSTNAAQTPSNEHDHRSQSAFLETSDFAAPSSSSEDRSLARLASAVFAYTSS 312
           L  S++   + S+     S SA L +S  A+P+SSS   +L+  +S++ A +SS
Sbjct: 83  LVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSS 136

>MLH3_HUMAN (Q9UHC1) DNA mismatch repair protein Mlh3 (MutL protein homolog 3)|
          Length = 1453

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
 Frame = +1

Query: 139 AKLKLRDSTNAAQTPSNEHDHRSQSAFLETSDFAAPSSSSEDRSLARLASAVFAYTSSR- 315
           +K+  +++  A++   NE   +S   FLE S    P  +S +  L+   +      S + 
Sbjct: 468 SKMLEQETIVASEAGENEKHKKS---FLEHSSLENPCGTSLEMFLSPFQTPCHFEESGQD 524

Query: 316 --VWKYFSNARGRNLGIRKTNRLMEK*TRFATA 408
             +WK  +   G    I K NR+  +  RF  A
Sbjct: 525 LEIWKESTTVNGMAANILKNNRIQNQPKRFKDA 557


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,732,092
Number of Sequences: 219361
Number of extensions: 1059696
Number of successful extensions: 3746
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3734
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)