Clone Name | rbart31c01 |
---|---|
Clone Library Name | barley_pub |
>gb|AY437442.1| Triticum aestivum cultivar Ning 7840 cytochrome P450 mRNA, complete cds Length = 1620 Score = 466 bits (235), Expect = e-128 Identities = 349/387 (90%) Strand = Plus / Minus Query: 114 tctacatctctaggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatca 173 |||||||||| |||||||| |||| ||| |||||||||||||| || ||||||||||||| Sbjct: 1572 tctacatctcgaggctcttgaggaccataggaagcccaaacttaggccgcagcgtgatca 1513 Query: 174 cgtccatcggggcatggacatacttaggtgatagggagaacgagaacctctgaagaatca 233 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1512 cgtccatcggggcatgaacatacttaggtgatagggagaacgagaacctctgaagaatca 1453 Query: 234 tggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaagacctgggtc 293 ||||||||||||||||||||| ||||| ||||| || ||||||||||| ||||| || | Sbjct: 1452 cggcgatcacggccttggcctcgatcattgcaaaattctgccctatgcatgacctcggcc 1393 Query: 294 cacttgagaaagacaacaaggcattggggtgttttccggcccgtgtcactccattctcaa 353 |||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| | Sbjct: 1392 cactagagaaagacaacaaggcattggggtgctttccggccctcgtcactccattctcga 1333 Query: 354 acctcataggcttgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcg 413 ||||||| |||||||| || ||||| || || ||||| |||||||||||||||||||||| Sbjct: 1332 acctcattggcttgaattcgttggcatcttctccccatacctccttgtcacgatgtatcg 1273 Query: 414 ttgcgatggggattgtgatgactgtgcctttgggcactttgatgccaccgacctcgagat 473 | ||||||||||| || | ||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 1272 tcgcgatggggatcgtcaagaccgtgccttcaggcactttgatgccaccaacctcgagat 1213 Query: 474 ctgaacctgcctttctctgaatggccg 500 | ||||| ||||| ||||||||||||| Sbjct: 1212 ccgaacccgccttcctctgaatggccg 1186
>gb|AY641449.1| Triticum aestivum cultivar Darius cytochrome P450 CYP709C1 (CYP709C1) mRNA, complete cds Length = 1798 Score = 454 bits (229), Expect = e-124 Identities = 346/385 (89%) Strand = Plus / Minus Query: 116 tacatctctaggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacg 175 ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 1632 tacatctctaggctcttgaggatcatgggaagcccaaacttaggccgcagcgtgatcaca 1573 Query: 176 tccatcggggcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatg 235 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| | Sbjct: 1572 tccatgggggcatggacatactttggtgatagggagaatgagaacctctgaagaatcacg 1513 Query: 236 gcgatcacggccttggcctctatcatagcaaagttttgccctatgcaagacctgggtcca 295 |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||| || ||| Sbjct: 1512 gcgatcacggccttggcctcgatcattgcaaagttctgccctatgcatgacctcggccca 1453 Query: 296 cttgagaaagacaacaaggcattggggtgttttccggcccgtgtcactccattctcaaac 355 || ||||||||||| || ||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 1452 ctggagaaagacaataatgcattggggtgctttccggcccttgtcactccattctcgaac 1393 Query: 356 ctcataggcttgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcgtt 415 |||||||||||||| | ||||| || || ||||||||||||||||| ||||||||||| Sbjct: 1392 ctcataggcttgaatttgttggcatcttctccccagacctccttgtcgcgatgtatcgtc 1333 Query: 416 gcgatggggattgtgatgactgtgcctttgggcactttgatgccaccgacctcgagatct 475 ||||||||||| || | || ||||||| || ||||||||||||||| ||||||||||| Sbjct: 1332 gcgatggggatcgttaggaacgtgccttcggtcactttgatgccaccaacctcgagatcc 1273 Query: 476 gaacctgcctttctctgaatggccg 500 ||||| ||||| ||||||||||||| Sbjct: 1272 gaacccgccttcctctgaatggccg 1248
>ref|XM_477684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1838 Score = 101 bits (51), Expect = 2e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 125 aggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggg 184 |||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || Sbjct: 1662 aggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggt 1603 Query: 185 gcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacg 244 |||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || Sbjct: 1602 gcatggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgaca 1543 Query: 245 gccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 1542 gccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 1484
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 101 bits (51), Expect = 2e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 125 aggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggg 184 |||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || Sbjct: 13272474 aggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggt 13272415 Query: 185 gcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacg 244 |||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || Sbjct: 13272414 gcatggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgaca 13272355 Query: 245 gccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 13272354 gccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 13272296 Score = 99.6 bits (50), Expect = 9e-18 Identities = 239/302 (79%) Strand = Plus / Plus Query: 125 aggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggg 184 |||||||| |||||||| || ||||| ||||||| ||||||||||| || || | || Sbjct: 13329262 aggctcttgaggatcatagggagcccgtacttgggacgcagcgtgataacatcagtgggt 13329321 Query: 185 gcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacg 244 |||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || Sbjct: 13329322 gcatggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgaca 13329381 Query: 245 gccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaaa 304 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 13329382 gccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaag 13329441 Query: 305 gacaacaaggcattggggtgttttccggcccgtgtcactccattctcaaacctcataggc 364 || | | || |||||||| || | |||| ||||| |||||||| |||||| ||| Sbjct: 13329442 gagagtagcgcgttggggtgcttcgctgccctcgtcaccccattctcgaacctctccggc 13329501 Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcgttgcgatgggg 424 | ||||||| || ||||| ||||| || ||||||||||| || || |||||||| ||| Sbjct: 13329502 ctaaactcatccgcatcctccccccacacttccttgtcacggtgaattgttgcgatcggg 13329561 Query: 425 at 426 || Sbjct: 13329562 at 13329563 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 340 cactccattctcaaacctcataggcttgaactcattggcgtcctcaccccagacctcctt 399 |||||||||||| |||||| ||||||||||| | ||||||||||||||| || ||||| Sbjct: 26315115 cactccattctcgaacctcgccggcttgaactcgtcggcgtcctcaccccacacttcctt 26315056 Query: 400 gtcacgatgtatcgttgcgatggggat 426 ||||||||| || |||||||| ||||| Sbjct: 26315055 gtcacgatggattgttgcgattgggat 26315029 Score = 79.8 bits (40), Expect = 8e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 128 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 187 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 26330865 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 26330806 Query: 188 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 247 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 26330805 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 26330746 Query: 248 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 26330745 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 26330690 Score = 69.9 bits (35), Expect = 8e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 340 cactccattctcaaacctcataggcttgaactcattggcgtcctcaccccagacctcctt 399 |||||||||||| ||||| ||||||||||||| ||||||||| ||||| || ||||| Sbjct: 26323595 cactccattctcggacctctctggcttgaactcatcggcgtcctccccccacacttcctt 26323536 Query: 400 gtcacgatgtatcgttgcgatggggat 426 |||||| || || |||||||| ||||| Sbjct: 26323535 gtcacggtggattgttgcgatcgggat 26323509 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||||| || || ||||||||||| | || | ||||||| ||||| |||||||||||| Sbjct: 26323720 gagaacctttgcaggatcatggcgatgatggtcctggcctcgatcatggcaaagttttgc 26323661 Query: 275 cctatgcaagacct 288 || ||||| ||||| Sbjct: 26323660 ccgatgcacgacct 26323647 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 ||||||||||| || ||||||| ||| ||||| |||||||| ||||| || || || ||| Sbjct: 26315240 gagaacctctgcaggatcatggtgatgacggctttggcctcaatcatggcgaaattctgc 26315181 Query: 275 cctatgcaagacct 288 || ||||| ||||| Sbjct: 26315180 ccgatgcatgacct 26315167
>dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0025D09 Length = 142593 Score = 101 bits (51), Expect = 2e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 125 aggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggg 184 |||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || Sbjct: 60337 aggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggt 60278 Query: 185 gcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacg 244 |||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || Sbjct: 60277 gcatggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgaca 60218 Query: 245 gccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 60217 gccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 60159 Score = 99.6 bits (50), Expect = 9e-18 Identities = 239/302 (79%) Strand = Plus / Plus Query: 125 aggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggg 184 |||||||| |||||||| || ||||| ||||||| ||||||||||| || || | || Sbjct: 117125 aggctcttgaggatcatagggagcccgtacttgggacgcagcgtgataacatcagtgggt 117184 Query: 185 gcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacg 244 |||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || Sbjct: 117185 gcatggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgaca 117244 Query: 245 gccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaaa 304 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 117245 gccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaag 117304 Query: 305 gacaacaaggcattggggtgttttccggcccgtgtcactccattctcaaacctcataggc 364 || | | || |||||||| || | |||| ||||| |||||||| |||||| ||| Sbjct: 117305 gagagtagcgcgttggggtgcttcgctgccctcgtcaccccattctcgaacctctccggc 117364 Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcgttgcgatgggg 424 | ||||||| || ||||| ||||| || ||||||||||| || || |||||||| ||| Sbjct: 117365 ctaaactcatccgcatcctccccccacacttccttgtcacggtgaattgttgcgatcggg 117424 Query: 425 at 426 || Sbjct: 117425 at 117426
>dbj|AK119557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-106-A06, full insert sequence Length = 1945 Score = 101 bits (51), Expect = 2e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 125 aggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggg 184 |||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || Sbjct: 1756 aggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggt 1697 Query: 185 gcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacg 244 |||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || Sbjct: 1696 gcatggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgaca 1637 Query: 245 gccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 1636 gccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 1578
>dbj|AK072220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166A09, full insert sequence Length = 1838 Score = 101 bits (51), Expect = 2e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 125 aggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggg 184 |||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || Sbjct: 1662 aggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggt 1603 Query: 185 gcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacg 244 |||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || Sbjct: 1602 gcatggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgaca 1543 Query: 245 gccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 1542 gccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 1484
>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_B01 Length = 105736 Score = 99.6 bits (50), Expect = 9e-18 Identities = 239/302 (79%) Strand = Plus / Plus Query: 125 aggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggg 184 |||||||| |||||||| || ||||| ||||||| ||||||||||| || || | || Sbjct: 43700 aggctcttgaggatcatagggagcccgtacttgggacgcagcgtgataacatcagtgggt 43759 Query: 185 gcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacg 244 |||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || Sbjct: 43760 gcatggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgaca 43819 Query: 245 gccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaaa 304 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 43820 gccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaag 43879 Query: 305 gacaacaaggcattggggtgttttccggcccgtgtcactccattctcaaacctcataggc 364 || | | || |||||||| || | |||| ||||| |||||||| |||||| ||| Sbjct: 43880 gagagtagcgcgttggggtgcttcgctgccctcgtcaccccattctcgaacctctccggc 43939 Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcgttgcgatgggg 424 | ||||||| || ||||| ||||| || ||||||||||| || || |||||||| ||| Sbjct: 43940 ctaaactcatccgcatcctccccccacacttccttgtcacggtgaattgttgcgatcggg 43999 Query: 425 at 426 || Sbjct: 44000 at 44001
>ref|NM_193131.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 340 cactccattctcaaacctcataggcttgaactcattggcgtcctcaccccagacctcctt 399 |||||||||||| |||||| ||||||||||| | ||||||||||||||| || ||||| Sbjct: 1326 cactccattctcgaacctcgccggcttgaactcgtcggcgtcctcaccccacacttcctt 1267 Query: 400 gtcacgatgtatcgttgcgatggggat 426 ||||||||| || |||||||| ||||| Sbjct: 1266 gtcacgatggattgttgcgattgggat 1240 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 ||||||||||| || ||||||| ||| ||||| |||||||| ||||| || || || ||| Sbjct: 1451 gagaacctctgcaggatcatggtgatgacggctttggcctcaatcatggcgaaattctgc 1392 Query: 275 cctatgcaagacct 288 || ||||| ||||| Sbjct: 1391 ccgatgcatgacct 1378
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 340 cactccattctcaaacctcataggcttgaactcattggcgtcctcaccccagacctcctt 399 |||||||||||| |||||| ||||||||||| | ||||||||||||||| || ||||| Sbjct: 89743 cactccattctcgaacctcgccggcttgaactcgtcggcgtcctcaccccacacttcctt 89684 Query: 400 gtcacgatgtatcgttgcgatggggat 426 ||||||||| || |||||||| ||||| Sbjct: 89683 gtcacgatggattgttgcgattgggat 89657 Score = 69.9 bits (35), Expect = 8e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 340 cactccattctcaaacctcataggcttgaactcattggcgtcctcaccccagacctcctt 399 |||||||||||| ||||| ||||||||||||| ||||||||| ||||| || ||||| Sbjct: 98223 cactccattctcggacctctctggcttgaactcatcggcgtcctccccccacacttcctt 98164 Query: 400 gtcacgatgtatcgttgcgatggggat 426 |||||| || || |||||||| ||||| Sbjct: 98163 gtcacggtggattgttgcgatcgggat 98137 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||||| || || ||||||||||| | || | ||||||| ||||| |||||||||||| Sbjct: 98348 gagaacctttgcaggatcatggcgatgatggtcctggcctcgatcatggcaaagttttgc 98289 Query: 275 cctatgcaagacct 288 || ||||| ||||| Sbjct: 98288 ccgatgcacgacct 98275 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 ||||||||||| || ||||||| ||| ||||| |||||||| ||||| || || || ||| Sbjct: 89868 gagaacctctgcaggatcatggtgatgacggctttggcctcaatcatggcgaaattctgc 89809 Query: 275 cctatgcaagacct 288 || ||||| ||||| Sbjct: 89808 ccgatgcatgacct 89795
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 340 cactccattctcaaacctcataggcttgaactcattggcgtcctcaccccagacctcctt 399 |||||||||||| |||||| ||||||||||| | ||||||||||||||| || ||||| Sbjct: 34693 cactccattctcgaacctcgccggcttgaactcgtcggcgtcctcaccccacacttcctt 34634 Query: 400 gtcacgatgtatcgttgcgatggggat 426 ||||||||| || |||||||| ||||| Sbjct: 34633 gtcacgatggattgttgcgattgggat 34607 Score = 79.8 bits (40), Expect = 8e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 128 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 187 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 50443 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 50384 Query: 188 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 247 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 50383 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 50324 Query: 248 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 50323 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 50268 Score = 69.9 bits (35), Expect = 8e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 340 cactccattctcaaacctcataggcttgaactcattggcgtcctcaccccagacctcctt 399 |||||||||||| ||||| ||||||||||||| ||||||||| ||||| || ||||| Sbjct: 43173 cactccattctcggacctctctggcttgaactcatcggcgtcctccccccacacttcctt 43114 Query: 400 gtcacgatgtatcgttgcgatggggat 426 |||||| || || |||||||| ||||| Sbjct: 43113 gtcacggtggattgttgcgatcgggat 43087 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||||| || || ||||||||||| | || | ||||||| ||||| |||||||||||| Sbjct: 43298 gagaacctttgcaggatcatggcgatgatggtcctggcctcgatcatggcaaagttttgc 43239 Query: 275 cctatgcaagacct 288 || ||||| ||||| Sbjct: 43238 ccgatgcacgacct 43225 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 ||||||||||| || ||||||| ||| ||||| |||||||| ||||| || || || ||| Sbjct: 34818 gagaacctctgcaggatcatggtgatgacggctttggcctcaatcatggcgaaattctgc 34759 Query: 275 cctatgcaagacct 288 || ||||| ||||| Sbjct: 34758 ccgatgcatgacct 34745
>ref|NM_193135.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1895 Score = 79.8 bits (40), Expect = 8e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 128 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 187 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 1716 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 1657 Query: 188 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 247 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 1656 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 1597 Query: 248 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 1596 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 1541
>dbj|AK121733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083C10, full insert sequence Length = 1914 Score = 79.8 bits (40), Expect = 8e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 128 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 187 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 1717 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 1658 Query: 188 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 247 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 1657 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 1598 Query: 248 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 1597 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 1542
>dbj|AK106081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A08, full insert sequence Length = 1895 Score = 79.8 bits (40), Expect = 8e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 128 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 187 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 1716 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 1657 Query: 188 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 247 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 1656 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 1597 Query: 248 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 303 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 1596 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 1541
>ref|NM_193133.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1524 Score = 69.9 bits (35), Expect = 8e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 340 cactccattctcaaacctcataggcttgaactcattggcgtcctcaccccagacctcctt 399 |||||||||||| ||||| ||||||||||||| ||||||||| ||||| || ||||| Sbjct: 1287 cactccattctcggacctctctggcttgaactcatcggcgtcctccccccacacttcctt 1228 Query: 400 gtcacgatgtatcgttgcgatggggat 426 |||||| || || |||||||| ||||| Sbjct: 1227 gtcacggtggattgttgcgatcgggat 1201 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||||| || || ||||||||||| | || | ||||||| ||||| |||||||||||| Sbjct: 1412 gagaacctttgcaggatcatggcgatgatggtcctggcctcgatcatggcaaagttttgc 1353 Query: 275 cctatgcaagacct 288 || ||||| ||||| Sbjct: 1352 ccgatgcacgacct 1339
>ref|NM_130263.2| Arabidopsis thaliana CYP709B2; heme binding / iron ion binding / monooxygenase/ oxygen binding AT2G46950 (CYP709B2) mRNA, complete cds Length = 2120 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 1683 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 1624 Query: 284 g 284 | Sbjct: 1623 g 1623
>gb|BT014808.1| Arabidopsis thaliana At2g46950 gene, complete cds Length = 1554 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 1445 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 1386 Query: 284 g 284 | Sbjct: 1385 g 1385
>gb|BT011625.1| Arabidopsis thaliana At2g46950 mRNA, complete cds Length = 1742 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 1540 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 1481 Query: 284 g 284 | Sbjct: 1480 g 1480
>gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M4 map CIC06C03, complete sequence Length = 106329 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 70004 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 69945 Query: 284 g 284 | Sbjct: 69944 g 69944 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 67172 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 67113 Query: 284 g 284 | Sbjct: 67112 g 67112
>emb|BX820881.1|CNS0A83L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2120 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 1683 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 1624 Query: 284 g 284 | Sbjct: 1623 g 1623
>ref|NM_184934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 631 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtc 402 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 153 ttgaactcatcggcatcgtcaccccaaacctccttgtc 190 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Plus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 3 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 62 Query: 275 cctatgcaagacctgggtccacttgagaa 303 || ||||| ||||| ||||| ||||||| Sbjct: 63 ccgatgcatgaccttggtcctattgagaa 91
>ref|NM_184933.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1850 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtc 402 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 1307 ttgaactcatcggcatcgtcaccccaaacctccttgtc 1270 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 1457 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 1398 Query: 275 cctatgcaagacctgggtccacttgagaa 303 || ||||| ||||| ||||| ||||||| Sbjct: 1397 ccgatgcatgaccttggtcctattgagaa 1369
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtc 402 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 14394164 ttgaactcatcggcatcgtcaccccaaacctccttgtc 14394127 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 14394314 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 14394255 Query: 275 cctatgcaagacctgggtccacttgagaa 303 || ||||| ||||| ||||| ||||||| Sbjct: 14394254 ccgatgcatgaccttggtcctattgagaa 14394226
>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3, complete sequence Length = 114882 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 418 gatggggattgtgatgactgtgcctttgggcact 451 |||||||||||| |||||||| || ||||||||| Sbjct: 45172 gatggggattgttatgactgttccattgggcact 45139
>gb|AC126917.1| Homo sapiens chromosome 5 clone RP11-467F22, complete sequence Length = 206737 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 tggattttcttacaaaatcata 61 |||||||||||||||||||||| Sbjct: 71271 tggattttcttacaaaatcata 71250
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtc 402 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 143393 ttgaactcatcggcatcgtcaccccaaacctccttgtc 143356 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 143543 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 143484 Query: 275 cctatgcaagacctgggtccacttgagaa 303 || ||||| ||||| ||||| ||||||| Sbjct: 143483 ccgatgcatgaccttggtcctattgagaa 143455
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtc 402 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 14389139 ttgaactcatcggcatcgtcaccccaaacctccttgtc 14389102 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 14389289 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 14389230 Query: 275 cctatgcaagacctgggtccacttgagaa 303 || ||||| ||||| ||||| ||||||| Sbjct: 14389229 ccgatgcatgaccttggtcctattgagaa 14389201
>dbj|AK120700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170M24, full insert sequence Length = 2167 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtc 402 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 1342 ttgaactcatcggcatcgtcaccccaaacctccttgtc 1305 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 1492 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 1433 Query: 275 cctatgcaagacctgggtccacttgagaa 303 || ||||| ||||| ||||| ||||||| Sbjct: 1432 ccgatgcatgaccttggtcctattgagaa 1404
>dbj|AK101513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E16, full insert sequence Length = 1849 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 ttgaactcattggcgtcctcaccccagacctccttgtc 402 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 1395 ttgaactcatcggcatcgtcaccccaaacctccttgtc 1358 Score = 42.1 bits (21), Expect = 1.7 Identities = 72/89 (80%) Strand = Plus / Minus Query: 215 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 274 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 1545 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 1486 Query: 275 cctatgcaagacctgggtccacttgagaa 303 || ||||| ||||| ||||| ||||||| Sbjct: 1485 ccgatgcatgaccttggtcctattgagaa 1457
>ref|NM_180134.1| Arabidopsis thaliana CYP709B1; heme binding / iron ion binding / monooxygenase/ oxygen binding AT2G46960 (CYP709B1) transcript variant AT2G46960.1 mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 1244 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 1185 Query: 284 g 284 | Sbjct: 1184 g 1184
>ref|NM_130264.1| Arabidopsis thaliana CYP709B1; heme binding / iron ion binding / monooxygenase/ oxygen binding AT2G46960 (CYP709B1) transcript variant AT2G46960.2 mRNA, complete cds Length = 1854 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 1496 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 1437 Query: 284 g 284 | Sbjct: 1436 g 1436
>gb|AC166645.4| Mus musculus chromosome 1, clone RP24-355D12, complete sequence Length = 169550 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 tggattttcttacaaaatcatacat 64 |||||||||||||||||||| |||| Sbjct: 42714 tggattttcttacaaaatcaaacat 42738
>gb|AC103396.8| Mus musculus chromosome 1, clone RP24-142I5, complete sequence Length = 183930 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 tggattttcttacaaaatcatacat 64 |||||||||||||||||||| |||| Sbjct: 103441 tggattttcttacaaaatcaaacat 103465
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 cgatcacggccttggcctctatcat 261 ||||||||||||||||||| ||||| Sbjct: 1132008 cgatcacggccttggcctcgatcat 1131984
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 cgatcacggccttggcctctatcat 261 ||||||||||||||||||| ||||| Sbjct: 98177 cgatcacggccttggcctcgatcat 98153
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 cgatcacggccttggcctctatcat 261 ||||||||||||||||||| ||||| Sbjct: 145416 cgatcacggccttggcctcgatcat 145392
>gb|AY091688.1| Arabidopsis thaliana At2g46960/F14M4.21 mRNA, complete cds Length = 1560 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 1448 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 1389 Query: 284 g 284 | Sbjct: 1388 g 1388
>gb|AF367329.1| Arabidopsis thaliana At2g46960/F14M4.21 mRNA, complete cds Length = 1855 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Minus Query: 224 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 283 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 1496 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 1437 Query: 284 g 284 | Sbjct: 1436 g 1436
>gb|AC068538.8| Homo sapiens BAC clone RP11-141G4 from 2, complete sequence Length = 173169 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tttgcgataagaccaataaataaac 88 ||||| ||||||||||||||||||| Sbjct: 110150 tttgccataagaccaataaataaac 110174
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 ctcaaacctcataggcttgaa 369 ||||||||||||||||||||| Sbjct: 287313 ctcaaacctcataggcttgaa 287333
>gb|AC166101.4| Mus musculus BAC clone RP23-385P23 from chromosome 6, complete sequence Length = 223116 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 193741 ataggcttgaactcattggc 193722
>gb|AC107634.8| Mus musculus chromosome 5, clone RP23-19G21, complete sequence Length = 201345 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 24120 ataggcttgaactcattggc 24139
>gb|AC167962.2| Mus musculus chromosome 1, clone wi1-1318N8, complete sequence Length = 38518 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 31395 ataggcttgaactcattggc 31376
>gb|AC167959.2| Mus musculus chromosome 1, clone wi1-870H21, complete sequence Length = 40520 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 16520 ataggcttgaactcattggc 16501
>gb|AC139231.11| Mus musculus chromosome 1, clone RP24-87I22, complete sequence Length = 191438 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 189679 ataggcttgaactcattggc 189698
>gb|AC109283.8| Mus musculus chromosome 1, clone RP24-156F3, complete sequence Length = 133845 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 2985 ataggcttgaactcattggc 3004
>gb|AC134411.7| Mus musculus chromosome 5, clone RP24-369N6, complete sequence Length = 150310 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 63135 ataggcttgaactcattggc 63154
>gb|AC131099.4| Mus musculus BAC clone RP23-15N12 from chromosome 13, complete sequence Length = 208298 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 tggcctctatcatagcaaag 268 |||||||||||||||||||| Sbjct: 37098 tggcctctatcatagcaaag 37117
>gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosome 9, complete sequence Length = 217329 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 119401 ataggcttgaactcattggc 119382
>gb|AC122429.3| Mus musculus BAC clone RP24-175I3 from chromosome 6, complete sequence Length = 188069 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 17299 ataggcttgaactcattggc 17280
>gb|AC129024.4| Mus musculus BAC clone RP23-436D14 from chromosome 6, complete sequence Length = 202285 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 165834 ataggcttgaactcattggc 165853
>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence Length = 177161 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 caaccttgtgttgtactcaa 107 |||||||||||||||||||| Sbjct: 66726 caaccttgtgttgtactcaa 66707
>gb|AC154559.2| Mus musculus BAC clone RP23-399P3 from chromosome 14, complete sequence Length = 198078 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 85000 ataggcttgaactcattggc 85019
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 atcatggcgatcacggccttggcc 253 |||||||||||| ||||||||||| Sbjct: 240359 atcatggcgatctcggccttggcc 240336
>ref|XM_504406.1| Yarrowia lipolytica CLIB122, YALI0E25982g predicted mRNA Length = 1572 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 gcgtcctcaccccagacctccttg 400 |||||||||||||||| ||||||| Sbjct: 1292 gcgtcctcaccccagaactccttg 1269
>gb|AY286203.1| Amazona aestiva cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1002 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ggattgtgatgactgtgcct 442 |||||||||||||||||||| Sbjct: 310 ggattgtgatgactgtgcct 291
>gb|AC101846.8| Mus musculus chromosome 5, clone RP23-258M22, complete sequence Length = 179892 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 173789 ataggcttgaactcattggc 173808
>gb|AC008087.11| Homo sapiens chromosome 17, clone RP5-1127L24, complete sequence Length = 104726 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gatggattttcttacaaaat 57 |||||||||||||||||||| Sbjct: 86212 gatggattttcttacaaaat 86193
>gb|DQ360292.1| Mus musculus strain CAST/Ei C-X3-C chemokine receptor 1 (Cx3cr1), C-C motif chemokine receptor 8 (Ccr8), ribosomal protein SA (Rpsa), and myelin-associated oligodendrocytic basic protein (Mobp) genes, complete cds Length = 200011 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 168460 ataggcttgaactcattggc 168441
>gb|AC129293.9| Mus musculus BAC clone RP24-535M14 from chromosome 3, complete sequence Length = 163981 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 127806 ataggcttgaactcattggc 127825
>gb|AF258545.2| Homo sapiens chromosome 17 clone PAC P579 HC90, HC71AC, HC6 and HC56 genes, complete sequence Length = 116004 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gatggattttcttacaaaat 57 |||||||||||||||||||| Sbjct: 74113 gatggattttcttacaaaat 74132
>dbj|AK050344.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730039N23 product:hypothetical protein, full insert sequence Length = 3847 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 3016 ataggcttgaactcattggc 3035
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ttttcttacaaaatcataca 63 |||||||||||||||||||| Sbjct: 6015445 ttttcttacaaaatcataca 6015426
>gb|AF258547.1|AF258547 Homo sapiens chromosome 17 unknown sequence Length = 52586 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gatggattttcttacaaaat 57 |||||||||||||||||||| Sbjct: 10695 gatggattttcttacaaaat 10714
>gb|AC027455.22| Homo sapiens chromosome 17, clone RP11-411G7, complete sequence Length = 145410 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gatggattttcttacaaaat 57 |||||||||||||||||||| Sbjct: 132766 gatggattttcttacaaaat 132747
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ttttcttacaaaatcataca 63 |||||||||||||||||||| Sbjct: 36284 ttttcttacaaaatcataca 36265
>emb|AL928793.13| Mouse DNA sequence from clone RP23-89M14 on chromosome 2, complete sequence Length = 238545 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 126130 ataggcttgaactcattggc 126111
>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence Length = 222792 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 124235 ataggcttgaactcattggc 124216
>emb|CT009541.12| Mouse DNA sequence from clone RP23-56C21 on chromosome 14, complete sequence Length = 215157 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 34315 ataggcttgaactcattggc 34334
>gb|AC132410.4| Mus musculus BAC clone RP23-348E10 from 8, complete sequence Length = 175530 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ataggcttgaactcattggc 378 |||||||||||||||||||| Sbjct: 64065 ataggcttgaactcattggc 64046
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 gcgtcctcaccccagacctccttg 400 |||||||||||||||| ||||||| Sbjct: 3083553 gcgtcctcaccccagaactccttg 3083576
>dbj|AB010388.1| Yarrowia lipolytica gene for ALK1, complete cds Length = 3578 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 gcgtcctcaccccagacctccttg 400 |||||||||||||||| ||||||| Sbjct: 2934 gcgtcctcaccccagaactccttg 2911 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,127,739 Number of Sequences: 3902068 Number of extensions: 4127739 Number of successful extensions: 74649 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74381 Number of HSP's gapped (non-prelim): 255 length of query: 503 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 481 effective length of database: 17,147,199,772 effective search space: 8247803090332 effective search space used: 8247803090332 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)