>ref|XM_463438.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 429

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 325 gccgcggcggacgcctcctcctgct 349
           |||||| ||||||||||||||||||
Sbjct: 71  gccgcgccggacgcctcctcctgct 47

>gb|DQ119665.1| Chlamydomonas reinhardtii central apparatus associated protein
           C1a-34 mRNA, complete cds
          Length = 921

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 325 gccgcggcggacgcctcctcctgct 349
           |||||||||| ||||||||||||||
Sbjct: 602 gccgcggcggccgcctcctcctgct 578

>gb|AC022144.8| Homo sapiens chromosome 19 clone CTD-2540F13, complete sequence
          Length = 149271

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    ggccacagctgagcaggggga 57
             |||||||||||||||||||||
Sbjct: 71664 ggccacagctgagcaggggga 71644

>dbj|AK094707.1| Homo sapiens cDNA FLJ37388 fis, clone BRAMY2026713
          Length = 2552

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   ggccacagctgagcaggggga 57
            |||||||||||||||||||||
Sbjct: 2058 ggccacagctgagcaggggga 2038

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 325      gccgcggcggacgcctcctcctgct 349
                |||||| ||||||||||||||||||
Sbjct: 32006313 gccgcgccggacgcctcctcctgct 32006337

>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 325   gccgcggcggacgcctcctcctgct 349
             |||||| ||||||||||||||||||
Sbjct: 48127 gccgcgccggacgcctcctcctgct 48151

>dbj|AK107573.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-D05, full
           insert sequence
          Length = 1204

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 325 gccgcggcggacgcctcctcctgct 349
           |||||| ||||||||||||||||||
Sbjct: 168 gccgcgccggacgcctcctcctgct 144

>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460E08
          Length = 170021

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 325    gccgcggcggacgcctcctcctgct 349
              |||||| ||||||||||||||||||
Sbjct: 103040 gccgcgccggacgcctcctcctgct 103064

>ref|NM_202477.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant
           AT3G01540.3 mRNA, complete cds
          Length = 2365

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 181 tggctgctaccgctgctgcttctg 204

>ref|NM_111020.2| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant
           AT3G01540.1 mRNA, complete cds
          Length = 2392

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 211 tggctgctaccgctgctgcttctg 234

>ref|NM_180161.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant
           AT3G01540.2 mRNA, complete cds
          Length = 2395

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 211 tggctgctaccgctgctgcttctg 234

>ref|NM_001035542.1| Arabidopsis thaliana DRH1 AT3G01540 (DRH1) transcript variant
           AT3G01540.4 mRNA, complete cds
          Length = 2289

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 211 tggctgctaccgctgctgcttctg 234

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     accgctgctgcttctgccgc 329
               ||||||||||||||||||||
Sbjct: 1083595 accgctgctgcttctgccgc 1083576

>ref|XM_570633.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CND03920) partial mRNA
          Length = 985

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 accgctgctgcttctgccgc 329
           ||||||||||||||||||||
Sbjct: 697 accgctgctgcttctgccgc 716

>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence,
             complete sequence
          Length = 105543

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 302   tggctgcaaccgctgctgcttctg 325
             ||||||| ||||||||||||||||
Sbjct: 38132 tggctgctaccgctgctgcttctg 38109

>emb|Z75713.1|CET01G9 Caenorhabditis elegans Cosmid T01G9, complete sequence
          Length = 23809

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  gaataaggggtactattttt 161
            ||||||||||||||||||||
Sbjct: 3324 gaataaggggtactattttt 3305

>emb|AL592436.7| Human DNA sequence from clone RP11-710N8 on chromosome 1 Contains a
             transcription elongation factor B (SIII), polypeptide 1
             (15kDa, elongin C) (TCEB1) pseudogene and a CCR4-NOT
             transcription complex, subunit 7 (CNOT7) pseudogene,
             complete sequence
          Length = 96782

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   ttatcacaatacattacataaaac 140
             |||| |||||||||||||||||||
Sbjct: 61858 ttatgacaatacattacataaaac 61881

>gb|BT009670.1| Arabidopsis thaliana At3g01540 gene, complete cds
          Length = 1857

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 2   tggctgctaccgctgctgcttctg 25

>gb|AC092067.2| Homo sapiens chromosome 19 clone CTB-184G21, complete sequence
          Length = 61958

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   cccacctccgaggtcagggc 237
             ||||||||||||||||||||
Sbjct: 27684 cccacctccgaggtcagggc 27665

>gb|AF462866.1|AF462866 Arabidopsis thaliana AT3g01540/F4P13_9 mRNA sequence
          Length = 2415

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 205 tggctgctaccgctgctgcttctg 228

>gb|AY062591.1| Arabidopsis thaliana RNA helicase, DRH1 (At3g01540; F4P13.9) mRNA,
           complete cds
          Length = 2264

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 205 tggctgctaccgctgctgcttctg 228

>gb|AF298118.1|AF298118 Zea mays putative transcription factor Golden2 gene, complete cds
          Length = 5168

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 311  ccgctgctgcttctgccgcggcgg 334
            ||||||||||||| ||||||||||
Sbjct: 3989 ccgctgctgcttcagccgcggcgg 3966

>gb|AF428313.1|AF428313 Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, complete cds
          Length = 2067

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 107 tggctgctaccgctgctgcttctg 130

>gb|AY050375.1| Arabidopsis thaliana AT3g01540/F4P13_9 mRNA, complete cds
          Length = 2165

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 205 tggctgctaccgctgctgcttctg 228

>gb|AF318579.1|AF318579 Zea mays putative transcription factor GOLDEN 2 mRNA, complete cds
          Length = 2192

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 311  ccgctgctgcttctgccgcggcgg 334
            ||||||||||||| ||||||||||
Sbjct: 1345 ccgctgctgcttcagccgcggcgg 1322

>emb|BX823517.1|CNS0A7FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS47ZA08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2267

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 181 tggctgctaccgctgctgcttctg 204

>gb|AC121253.3| Homo sapiens chromosome 3 clone RP11-208G16, complete sequence
          Length = 142193

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    atacattacataaaacagaa 144
              ||||||||||||||||||||
Sbjct: 107555 atacattacataaaacagaa 107574

>gb|AC011555.5|AC011555 Homo sapiens chromosome 19 clone LLNLR-280G7, complete sequence
          Length = 42546

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   cccacctccgaggtcagggc 237
             ||||||||||||||||||||
Sbjct: 17424 cccacctccgaggtcagggc 17405

>dbj|AB010259.1| Arabidopsis thaliana mRNA for DRH1, complete cds
          Length = 1924

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 302 tggctgcaaccgctgctgcttctg 325
           ||||||| ||||||||||||||||
Sbjct: 9   tggctgctaccgctgctgcttctg 32


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,008,779
Number of Sequences: 3902068
Number of extensions: 3008779
Number of successful extensions: 69285
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69200
Number of HSP's gapped (non-prelim): 85
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)