Clone Name | rbart31b06 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_191661.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 373 bits (188), Expect = e-100 Identities = 272/300 (90%) Strand = Plus / Minus Query: 246 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 305 ||||||||||||||| ||||||| |||||||| | |||||||| || ||| || || || Sbjct: 660 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 601 Query: 306 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 600 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 541 Query: 366 cccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgttg 425 ||||| |||||||| ||||||||||||||| |||||| ||||| |||||||||||||| Sbjct: 540 gccaacattatcatcaaccccatgcaaagtagtatgagcgtgcagcagtgactgccgttg 481 Query: 426 ttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttcttcg 485 ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 480 ttgatgaagatcctgaagaattgacacaccaagttcttctgtctccaatatggttcttcg 421 Query: 486 gctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaaccttcc 545 |||||||||||| | ||| ||||||||||||||| |||||||||||||||||| ||||| Sbjct: 420 gctctctttaatcttatcattggactgattcagtctttctgttgtcatcatcaatcttcc 361
>dbj|AK104463.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C03, full insert sequence Length = 1092 Score = 373 bits (188), Expect = e-100 Identities = 272/300 (90%) Strand = Plus / Minus Query: 246 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 305 ||||||||||||||| ||||||| |||||||| | |||||||| || ||| || || || Sbjct: 871 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 812 Query: 306 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 811 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 752 Query: 366 cccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgttg 425 ||||| |||||||| ||||||||||||||| |||||| ||||| |||||||||||||| Sbjct: 751 gccaacattatcatcaaccccatgcaaagtagtatgagcgtgcagcagtgactgccgttg 692 Query: 426 ttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttcttcg 485 ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 691 ttgatgaagatcctgaagaattgacacaccaagttcttctgtctccaatatggttcttcg 632 Query: 486 gctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaaccttcc 545 |||||||||||| | ||| ||||||||||||||| |||||||||||||||||| ||||| Sbjct: 631 gctctctttaatcttatcattggactgattcagtctttctgttgtcatcatcaatcttcc 572
>dbj|AK072746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135J09, full insert sequence Length = 2300 Score = 373 bits (188), Expect = e-100 Identities = 272/300 (90%) Strand = Plus / Minus Query: 246 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 305 ||||||||||||||| ||||||| |||||||| | |||||||| || ||| || || || Sbjct: 2060 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 2001 Query: 306 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2000 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 1941 Query: 366 cccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgttg 425 ||||| |||||||| ||||||||||||||| |||||| ||||| |||||||||||||| Sbjct: 1940 gccaacattatcatcaaccccatgcaaagtagtatgagcgtgcagcagtgactgccgttg 1881 Query: 426 ttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttcttcg 485 ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1880 ttgatgaagatcctgaagaattgacacaccaagttcttctgtctccaatatggttcttcg 1821 Query: 486 gctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaaccttcc 545 |||||||||||| | ||| ||||||||||||||| |||||||||||||||||| ||||| Sbjct: 1820 gctctctttaatcttatcattggactgattcagtctttctgttgtcatcatcaatcttcc 1761
>dbj|AK059962.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-F05, full insert sequence Length = 1086 Score = 373 bits (188), Expect = e-100 Identities = 272/300 (90%) Strand = Plus / Minus Query: 246 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 305 ||||||||||||||| ||||||| |||||||| | |||||||| || ||| || || || Sbjct: 871 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 812 Query: 306 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 811 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 752 Query: 366 cccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgttg 425 ||||| |||||||| ||||||||||||||| |||||| ||||| |||||||||||||| Sbjct: 751 gccaacattatcatcaaccccatgcaaagtagtatgagcgtgcagcagtgactgccgttg 692 Query: 426 ttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttcttcg 485 ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 691 ttgatgaagatcctgaagaattgacacaccaagttcttctgtctccaatatggttcttcg 632 Query: 486 gctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaaccttcc 545 |||||||||||| | ||| ||||||||||||||| |||||||||||||||||| ||||| Sbjct: 631 gctctctttaatcttatcattggactgattcagtctttctgttgtcatcatcaatcttcc 572
>gb|AY104165.1| Zea mays PCO134015 mRNA sequence Length = 1189 Score = 349 bits (176), Expect = 6e-93 Identities = 266/296 (89%) Strand = Plus / Minus Query: 244 tgagcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattcca 303 ||||||||||| ||||||||||||| |||||||||| | | |||| | |||||||| Sbjct: 932 tgagcgagcttgaagtagagtatgaaaaggatggccagagcgagagccgtgatgattccc 873 Query: 304 ccaatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctc 363 |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct: 872 ccaatgatccacttgttcctatccatcctctttgacattgcagccaggatcttcttgctc 813 Query: 364 ttcccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgt 423 || |||| ||||||||| || || ||||||||| ||||||||| ||||||||||||| Sbjct: 812 ttgccaatgttatcatcaactccgtgcaaagtagtatgagcatgtagtagtgactgcctc 753 Query: 424 tgttgatgaaggtcctgaagaattgacacaccaagttcttctgtctccagcatagttctt 483 ||||| ||||||||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct: 752 tgttggtgaaggtcctgaagaatcgagacaccaagttcttctgtctccaacatagttctt 693 Query: 484 cggctctctttaattctgtcagtggactgattcagtcgttctgttgtcatcatcaa 539 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 692 cggctctctttaattctgtcagtggactgattcagtctttcagttgtcatcatcaa 637 Score = 40.1 bits (20), Expect = 7.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 180 cagacaac-cttatcacacaattactga 206 |||||||| ||||||||||||||||||| Sbjct: 1001 cagacaactcttatcacacaattactga 974
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 399 atgagcatgcagtagtgactgccgttgttgatgaaggtcctgaagaattgacacaccaag 458 |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 29360102 atgagcgtgcagcagtgactgccgttgttgatgaagatcctgaagaattgacacaccaag 29360043 Query: 459 ttcttctgtctccagcatagttcttcggctctctttaattctgtcagtggactgattcag 518 |||||||||||||| || |||||||||||||||||||| | ||| ||||||||||||| Sbjct: 29360042 ttcttctgtctccaatatggttcttcggctctctttaatcttatcattggactgattcag 29359983 Query: 519 tcgttctgttgtcatcatcaaccttcc 545 || |||||||||||||||||| ||||| Sbjct: 29359982 tctttctgttgtcatcatcaatcttcc 29359956 Score = 180 bits (91), Expect = 3e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 246 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 305 ||||||||||||||| ||||||| |||||||| | |||||||| || ||| || || || Sbjct: 29360914 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 29360855 Query: 306 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 29360854 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 29360795 Query: 366 cccaacgttatcatcgaccccatgcaa 392 ||||| |||||||| ||||||||||| Sbjct: 29360794 gccaacattatcatcaaccccatgcaa 29360768 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 21308053 atgatccacttgttcctgtccatcctc 21308027 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 21279567 atgatccacttgttcctgtccatcctc 21279541 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 21274627 atgatccacttgttcctgtccatcctc 21274601 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 ccaagttcttctgtctccagcatagttct 482 ||||| ||||| ||||||||||||||||| Sbjct: 21273677 ccaagatcttcagtctccagcatagttct 21273649
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 399 atgagcatgcagtagtgactgccgttgttgatgaaggtcctgaagaattgacacaccaag 458 |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138965 atgagcgtgcagcagtgactgccgttgttgatgaagatcctgaagaattgacacaccaag 138906 Query: 459 ttcttctgtctccagcatagttcttcggctctctttaattctgtcagtggactgattcag 518 |||||||||||||| || |||||||||||||||||||| | ||| ||||||||||||| Sbjct: 138905 ttcttctgtctccaatatggttcttcggctctctttaatcttatcattggactgattcag 138846 Query: 519 tcgttctgttgtcatcatcaaccttcc 545 || |||||||||||||||||| ||||| Sbjct: 138845 tctttctgttgtcatcatcaatcttcc 138819 Score = 180 bits (91), Expect = 3e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 246 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 305 ||||||||||||||| ||||||| |||||||| | |||||||| || ||| || || || Sbjct: 139777 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 139718 Query: 306 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 139717 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 139658 Query: 366 cccaacgttatcatcgaccccatgcaa 392 ||||| |||||||| ||||||||||| Sbjct: 139657 gccaacattatcatcaaccccatgcaa 139631
>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F09 Length = 138277 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 399 atgagcatgcagtagtgactgccgttgttgatgaaggtcctgaagaattgacacaccaag 458 |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 55164 atgagcgtgcagcagtgactgccgttgttgatgaagatcctgaagaattgacacaccaag 55105 Query: 459 ttcttctgtctccagcatagttcttcggctctctttaattctgtcagtggactgattcag 518 |||||||||||||| || |||||||||||||||||||| | ||| ||||||||||||| Sbjct: 55104 ttcttctgtctccaatatggttcttcggctctctttaatcttatcattggactgattcag 55045 Query: 519 tcgttctgttgtcatcatcaaccttcc 545 || |||||||||||||||||| ||||| Sbjct: 55044 tctttctgttgtcatcatcaatcttcc 55018 Score = 180 bits (91), Expect = 3e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 246 agcgagcttaaagtagagtatgatgaggatggccacaacaagagttgaaatgattccacc 305 ||||||||||||||| ||||||| |||||||| | |||||||| || ||| || || || Sbjct: 55976 agcgagcttaaagtacagtatgagaaggatggctagaacaagagctgcaattatcccccc 55917 Query: 306 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctctt 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 55916 aatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttactctt 55857 Query: 366 cccaacgttatcatcgaccccatgcaa 392 ||||| |||||||| ||||||||||| Sbjct: 55856 gccaacattatcatcaaccccatgcaa 55830
>gb|AC182667.2| Populus trichocarpa clone Pop1-18L12, complete sequence Length = 32928 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 441 aagaattgacacaccaagttcttctgtctccagcatagttcttcggctctctttaat 497 ||||||||| |||||||| ||||||||||| ||||| ||||||| |||||| ||||| Sbjct: 3202 aagaattgagacaccaagctcttctgtctctagcatggttcttctgctctccttaat 3146
>gb|AY105301.1| Zea mays PCO100019 mRNA sequence Length = 1051 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 396 atcatgagcatgcagtagtgactgccgttgttgatgaaggtcctgaagaattgacacacc 455 |||||||||||||| || ||||| || |||||| ||||| || || || || ||||| Sbjct: 679 atcatgagcatgcaagagagactggcgctgttgactcaggtcatgcaggatagagacacc 620 Query: 456 aagttcttctgtctccagcatagttct 482 ||||||||| ||||||||||||||||| Sbjct: 619 aagttcttcagtctccagcatagttct 593
>ref|NM_113833.2| Arabidopsis thaliana VTI13; SNARE binding / receptor AT3G29100 (VTI13) mRNA, complete cds Length = 1299 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 436 tcctgaagaattgacacaccaagttcttctgtctccagcatagttct 482 |||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 1023 tcctgaaggattgaaacaccaagctcttctgtctccagtatcgttct 977 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 ttgctcttcccaacgttatcatcgaccccatg 389 |||||||| || |||||||||||||| ||||| Sbjct: 1101 ttgctctttccgacgttatcatcgactccatg 1070
>ref|NM_193510.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 237 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 170 atgatccacttgttcctgtccatcctc 144
>ref|NM_193508.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 599 atgatccacttgttcctgtccatcctc 573 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 ccaagttcttctgtctccagcatagttct 482 ||||| ||||| ||||||||||||||||| Sbjct: 452 ccaagatcttcagtctccagcatagttct 424
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 29991 atgatccacttgttcctgtccatcctc 29965 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 1505 atgatccacttgttcctgtccatcctc 1479
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 177076 atgatccacttgttcctgtccatcctc 177050 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 172136 atgatccacttgttcctgtccatcctc 172110 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 ccaagttcttctgtctccagcatagttct 482 ||||| ||||| ||||||||||||||||| Sbjct: 171186 ccaagatcttcagtctccagcatagttct 171158
>dbj|AK118255.1| Arabidopsis thaliana At3g29100 mRNA for putative vesicle transport protein, complete cds, clone: RAFL19-55-L11 Length = 1077 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 436 tcctgaagaattgacacaccaagttcttctgtctccagcatagttct 482 |||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 831 tcctgaaggattgaaacaccaagctcttctgtctccagtatcgttct 785 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 ttgctcttcccaacgttatcatcgaccccatg 389 |||||||| || |||||||||||||| ||||| Sbjct: 909 ttgctctttccgacgttatcatcgactccatg 878
>dbj|AB018121.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXE2 Length = 86854 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 436 tcctgaagaattgacacaccaagttcttctgtctccagcatagttct 482 |||||||| ||||| |||||||| |||||||||||||| || ||||| Sbjct: 23758 tcctgaaggattgaaacaccaagctcttctgtctccagtatcgttct 23804 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 358 ttgctcttcccaacgttatcatcgaccccatg 389 |||||||| || |||||||||||||| ||||| Sbjct: 23680 ttgctctttccgacgttatcatcgactccatg 23711
>dbj|AK102003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079N06, full insert sequence Length = 947 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 307 atgatccacttgttcctgtccatcctc 333 ||||||||||||||||||||||||||| Sbjct: 707 atgatccacttgttcctgtccatcctc 681 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 ccaagttcttctgtctccagcatagttct 482 ||||| ||||| ||||||||||||||||| Sbjct: 560 ccaagatcttcagtctccagcatagttct 532
>gb|DQ235191.1| Solanum tuberosum clone 167C07 vesicle transport v-SNARE 11-like mRNA, complete cds Length = 1025 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Minus Query: 304 ccaatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctc 363 ||||||||||| || |||||| |||||| ||||||||| | ||| ||||| |||||| Sbjct: 701 ccaatgatccatttattcctgctcatccttcttgacattgtagtcagaatcttcttgctc 642 Query: 364 ttcccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgt 423 | | || |||||||| || ||||| | || ||||| |||||||| || ||||| ||| Sbjct: 641 ctgctaatattatcatccactccatggagcgtgtcatgtgcatgcagaagagactgacgt 582 Query: 424 tgttgatgaaggtcctgaagaattga 449 |||||||| | || ||||||||||| Sbjct: 581 tgttgatgcaaatcttgaagaattga 556
>gb|DQ191651.1| Solanum tuberosum unknown mRNA Length = 966 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Minus Query: 304 ccaatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctc 363 ||||||||||| || |||||| |||||| ||||||||| | ||| ||||| |||||| Sbjct: 700 ccaatgatccatttattcctgctcatccttcttgacattgtagtcagaatcttcttgctc 641 Query: 364 ttcccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgt 423 | | || |||||||| || ||||| | || ||||| |||||||| || ||||| ||| Sbjct: 640 ctgctaatattatcatccactccatggagcgtgtcatgtgcatgcagaagagactgacgt 581 Query: 424 tgttgatgaaggtcctgaagaattga 449 |||||||| | || ||||||||||| Sbjct: 580 tgttgatgcaaatcttgaagaattga 555
>emb|AL353149.10| Human DNA sequence from clone RP11-129G17 on chromosome 10 Contains the 3' end of gene FLJ11218, complete sequence Length = 64459 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 tcacttttgtttttcagaacagtttta 32 |||||||| |||||||||||||||||| Sbjct: 61080 tcacttttttttttcagaacagtttta 61106
>dbj|AB102768.1| Oryzias latipes plscr1, zic4, zic1 genes for phospholipid scramblase 1, zinc finger of the cerebellum 4, zinc finger of the cerebellum 1, partial and complete cds Length = 228508 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 cctgaagaattgacacaccaagt 459 ||||||||||||||||||||||| Sbjct: 65995 cctgaagaattgacacaccaagt 66017
>gb|BT013170.1| Lycopersicon esculentum clone 134237F, mRNA sequence Length = 1000 Score = 44.1 bits (22), Expect = 0.48 Identities = 115/146 (78%) Strand = Plus / Minus Query: 304 ccaatgatccacttgttcctgtccatcctctttgacattgccgccaggatctttttgctc 363 ||||||||||| || |||||| |||||| ||||||||| | || ||||| |||||| Sbjct: 739 ccaatgatccatttattcctgctcatccttcttgacattgtagtcaaaatcttcttgctc 680 Query: 364 ttcccaacgttatcatcgaccccatgcaaagtatcatgagcatgcagtagtgactgccgt 423 | | || |||||||| || ||||| | || ||||| |||||||| || ||||| ||| Sbjct: 679 ctgctaatattatcatccactccatgaagcgtgtcatgtgcatgcagaagagactgacgt 620 Query: 424 tgttgatgaaggtcctgaagaattga 449 |||||||| | || ||||||||||| Sbjct: 619 tgttgatgcaaatcttgaagaattga 594
>emb|AJ973437.1| Toxoptera citricida partial mRNA for hypothetical protein (ORF4), clone tcitEST4 Length = 324 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ttttgtttttcagaacagtttt 31 |||||||||||||||||||||| Sbjct: 182 ttttgtttttcagaacagtttt 161
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 510 ctgattcagtcgttctgttgtcatc 534 |||||||||||||| |||||||||| Sbjct: 1634547 ctgattcagtcgttgtgttgtcatc 1634523
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 525 tgttgtcatcatcaaccttcctcgc 549 |||||||||||||||||||| |||| Sbjct: 4006 tgttgtcatcatcaaccttcatcgc 3982
>gb|AC087041.2| Rattus norvegicus strain Brown Norway clone RP31-188L2, complete sequence Length = 123260 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 aagggacaatctgtgttgtccaatg 167 ||||||||||| ||||||||||||| Sbjct: 43864 aagggacaatcagtgttgtccaatg 43840
>gb|AC145992.2| Pan troglodytes BAC clone RP43-172K3 from 7, complete sequence Length = 208817 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 aaagtagagtatgatgaggat 275 ||||||||||||||||||||| Sbjct: 132065 aaagtagagtatgatgaggat 132085
>gb|AC006451.5| Homo sapiens PAC clone RP4-562A11 from 7, complete sequence Length = 145966 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 aaagtagagtatgatgaggat 275 ||||||||||||||||||||| Sbjct: 97145 aaagtagagtatgatgaggat 97125
>gb|AC119412.16| Medicago truncatula clone mth2-31d18, complete sequence Length = 120757 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 304 ccaatgatccacttgttcctgtccatcct 332 |||||||||||||||||| ||| |||||| Sbjct: 46784 ccaatgatccacttgttcttgttcatcct 46756
>emb|AL451044.7| Human DNA sequence from clone RP11-293K19 on chromosome 1 Contains part of the DOCK7 gene for dedicator of cytokinesis 7, complete sequence Length = 127370 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 ttttgtttttcagaacagttttaca 34 |||| |||||||||||||||||||| Sbjct: 45705 ttttttttttcagaacagttttaca 45681
>emb|AL157762.13| Human DNA sequence from clone RP11-153I24 on chromosome 13q33.1-34 Contains the LIG4 gene for ligase IV, DNA, ATP-dependent, a novel gene (FLJ14906), the TNFSF13B gene for tumor necrosis factor (ligand) superfamily, member 13b and a CpG island, complete sequence Length = 185229 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 11 tttgtttttcagaacagttttacat 35 |||||||||||||| |||||||||| Sbjct: 145331 tttgtttttcagaagagttttacat 145355
>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231332 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 aagggacaatctgtgttgtccaatg 167 ||||||||||| ||||||||||||| Sbjct: 27756 aagggacaatcagtgttgtccaatg 27780
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 525 tgttgtcatcatcaaccttcctcgc 549 |||||||||||||||||||| |||| Sbjct: 7726420 tgttgtcatcatcaaccttcatcgc 7726396
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 aagggacaatctgtgttgtccaatg 167 ||||||||||| ||||||||||||| Sbjct: 620650 aagggacaatcagtgttgtccaatg 620626
>gb|AC159380.8| Mus musculus 10 BAC RP24-460M18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 196877 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ggcacaactgacttcctgaca 69 ||||||||||||||||||||| Sbjct: 145663 ggcacaactgacttcctgaca 145683
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10, complete sequence Length = 75032 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 525 tgttgtcatcatcaaccttcctcgc 549 |||||||||||||||||||| |||| Sbjct: 36928 tgttgtcatcatcaaccttcatcgc 36904
>gb|AC167976.4| Mus musculus BAC clone RP23-167L5 from chromosome 3, complete sequence Length = 211791 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gacctacctggctggctcag 243 |||||||||||||||||||| Sbjct: 131741 gacctacctggctggctcag 131760
>ref|XM_476215.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 126 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tgttgtcatcatcaaccttc 544 |||||||||||||||||||| Sbjct: 22 tgttgtcatcatcaaccttc 3
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 atgccaatgaacaactcaaa 109 |||||||||||||||||||| Sbjct: 809012 atgccaatgaacaactcaaa 808993
>gb|AC084381.6| Homo sapiens BAC clone RP11-20K20 from 7, complete sequence Length = 129727 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctctctttaattctgtcagt 506 |||||||||||||||||||| Sbjct: 121977 ctctctttaattctgtcagt 121958
>gb|AC091538.3| Sus scrofa clone RP44-26G1, complete sequence Length = 40014 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tgtttttcagaacagtttta 32 |||||||||||||||||||| Sbjct: 27158 tgtttttcagaacagtttta 27139
>emb|CR726422.2|CNS0GNGC Tetraodon nigroviridis full-length cDNA Length = 1022 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 236 ttcctgtccatcctctttga 217
>emb|CR725519.2|CNS0GMR9 Tetraodon nigroviridis full-length cDNA Length = 1572 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 215 ttcctgtccatcctctttga 196
>emb|CR714652.2|CNS0GEDK Tetraodon nigroviridis full-length cDNA Length = 950 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 163 ttcctgtccatcctctttga 144
>emb|CR714556.2|CNS0GEAW Tetraodon nigroviridis full-length cDNA Length = 653 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 225 ttcctgtccatcctctttga 206
>emb|CR709930.2|CNS0GAQE Tetraodon nigroviridis full-length cDNA Length = 646 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 218 ttcctgtccatcctctttga 199
>emb|CR709463.2|CNS0GADF Tetraodon nigroviridis full-length cDNA Length = 951 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 164 ttcctgtccatcctctttga 145
>emb|CR708441.2|CNS0G9L1 Tetraodon nigroviridis full-length cDNA Length = 951 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 164 ttcctgtccatcctctttga 145
>emb|CR704236.2|CNS0G6C8 Tetraodon nigroviridis full-length cDNA Length = 1007 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 217 ttcctgtccatcctctttga 198
>emb|CR700286.2|CNS0G3AI Tetraodon nigroviridis full-length cDNA Length = 1338 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 215 ttcctgtccatcctctttga 196
>emb|CR697688.2|CNS0G1AC Tetraodon nigroviridis full-length cDNA Length = 1559 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 220 ttcctgtccatcctctttga 201
>emb|CR690633.2|CNS0FVUD Tetraodon nigroviridis full-length cDNA Length = 989 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 215 ttcctgtccatcctctttga 196
>emb|CR689349.2|CNS0FUUP Tetraodon nigroviridis full-length cDNA Length = 439 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 225 ttcctgtccatcctctttga 206
>emb|CR672581.2|CNS0FHXN Tetraodon nigroviridis full-length cDNA Length = 1490 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 138 ttcctgtccatcctctttga 119
>emb|CR670137.2|CNS0FG1R Tetraodon nigroviridis full-length cDNA Length = 1585 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 230 ttcctgtccatcctctttga 211
>gb|AC005588.1| Homo sapiens PAC clone RP5-1161G23 from 7, complete sequence Length = 119483 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 caaatatttaaagatgtttg 125 |||||||||||||||||||| Sbjct: 109892 caaatatttaaagatgtttg 109911
>emb|CR667360.1|CNS0FDWM Tetraodon nigroviridis full-length cDNA Length = 1577 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 225 ttcctgtccatcctctttga 206
>emb|CR647318.2|CNS0EYFW Tetraodon nigroviridis full-length cDNA Length = 1541 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 202 ttcctgtccatcctctttga 183
>emb|CR641428.2|CNS0ETWA Tetraodon nigroviridis full-length cDNA Length = 1011 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 225 ttcctgtccatcctctttga 206
>emb|CR634500.3|CNS0EOJU Tetraodon nigroviridis full-length cDNA Length = 1007 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttcctgtccatcctctttga 338 |||||||||||||||||||| Sbjct: 218 ttcctgtccatcctctttga 199
>emb|AL451050.8| Human DNA sequence from clone RP11-277B15 on chromosome 1 Contains a ribosomal protein S17 (RPS17) pseudogene, a novel gene, the 5' end of the POU2F1 gene for POU domain class 2 transcription factor 1 and a CpG island, complete sequence Length = 122416 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 ctctctttaattctgtcagt 506 |||||||||||||||||||| Sbjct: 15465 ctctctttaattctgtcagt 15484
>gb|AC155261.3| Mus musculus BAC clone RP24-66D10 from chromosome 18, complete sequence Length = 207400 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 catgagcatgcagtagtgactgcc 421 |||| ||||||||||||||||||| Sbjct: 108870 catgggcatgcagtagtgactgcc 108893
>gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, complete sequence Length = 167229 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gacaagagtgttgctataca 85 |||||||||||||||||||| Sbjct: 122309 gacaagagtgttgctataca 122290
>emb|BX927159.10| Zebrafish DNA sequence from clone DKEY-17C23 in linkage group 17, complete sequence Length = 169728 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 85 atgacatgccaatgaacaactcaaatat 112 ||||||||||| | |||||||||||||| Sbjct: 165629 atgacatgccattcaacaactcaaatat 165602
>ref|NM_001039852.1| Monodelphis domestica bitter taste receptor Modo-T2R62 (T2R62), mRNA Length = 903 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 aatgatccacttgttcctgt 325 |||||||||||||||||||| Sbjct: 369 aatgatccacttgttcctgt 388
>gb|AC027285.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-40I5, complete sequence Length = 241886 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 tcggctctctttaattctgt 502 |||||||||||||||||||| Sbjct: 107458 tcggctctctttaattctgt 107477
>gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231946 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 tcggctctctttaattctgt 502 |||||||||||||||||||| Sbjct: 47700 tcggctctctttaattctgt 47719
>gb|AC061710.16| Homo sapiens 3 BAC RP11-395F21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187657 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tttgtttttcagaacagttt 30 |||||||||||||||||||| Sbjct: 151568 tttgtttttcagaacagttt 151549
>gb|AC026719.4| Homo sapiens chromosome 5 clone CTD-2161F6, complete sequence Length = 145605 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tttttcagaacagttttaca 34 |||||||||||||||||||| Sbjct: 63078 tttttcagaacagttttaca 63097
>gb|AC012374.13| Homo sapiens chromosome 15 clone ctd-2287a20 map 15q21, complete sequence Length = 142105 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctctctttaattctgtcagt 506 |||||||||||||||||||| Sbjct: 66843 ctctctttaattctgtcagt 66824
>gb|AC010999.6|AC010999 Homo sapiens chromosome 15 clone RP11-323F24 map 15q21.3, complete sequence Length = 221986 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctctctttaattctgtcagt 506 |||||||||||||||||||| Sbjct: 27403 ctctctttaattctgtcagt 27384
>dbj|AK054388.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330021L10 product:unclassifiable, full insert sequence Length = 2936 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 tcggctctctttaattctgt 502 |||||||||||||||||||| Sbjct: 2266 tcggctctctttaattctgt 2285
>gb|AC090517.2|AC090517 Homo sapiens chromosome 15 clone RP11-31H5 map 15q21.3, complete sequence Length = 185446 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctctctttaattctgtcagt 506 |||||||||||||||||||| Sbjct: 162481 ctctctttaattctgtcagt 162462
>emb|BX822946.1|CNS0A70C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1300 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 358 ttgctcttcccaacgttatcatcgaccccatg 389 |||||||| || |||||||||||||| ||||| Sbjct: 1101 ttgctctttccgacgttatcatcgactccatg 1070
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cctgtccatcctctttgacattgc 344 ||||||||||||||||| |||||| Sbjct: 45002 cctgtccatcctctttgccattgc 44979
>emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in linkage group 18, complete sequence Length = 130348 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gatgaaggtcctgaagaatt 447 |||||||||||||||||||| Sbjct: 121754 gatgaaggtcctgaagaatt 121735
>gb|AC122343.4| Mus musculus BAC clone RP23-359L18 from chromosome 7, complete sequence Length = 228892 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gtttctcacttttgtttttc 20 |||||||||||||||||||| Sbjct: 110722 gtttctcacttttgtttttc 110741
>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cctgtccatcctctttgacattgc 344 ||||||||||||||||| |||||| Sbjct: 34700 cctgtccatcctctttgccattgc 34723
>gb|AC148002.3| Mus musculus BAC clone RP23-478M1 from 18, complete sequence Length = 200845 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 catgagcatgcagtagtgactgcc 421 |||| ||||||||||||||||||| Sbjct: 181025 catgggcatgcagtagtgactgcc 181048
>dbj|AB249765.1| Monodelphis domestica DNA for bitter taste receptor, complete cds, clone: Modo-T2R62 Length = 903 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 aatgatccacttgttcctgt 325 |||||||||||||||||||| Sbjct: 369 aatgatccacttgttcctgt 388
>dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-715F3, complete sequence Length = 174547 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 acaactcaaatatttaaaga 119 |||||||||||||||||||| Sbjct: 37054 acaactcaaatatttaaaga 37073
>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete sequence Length = 184866 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tctctttaattctgtcagtg 507 |||||||||||||||||||| Sbjct: 25817 tctctttaattctgtcagtg 25836
>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete sequence Length = 222471 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aatgaacaactcaaatattt 114 |||||||||||||||||||| Sbjct: 217158 aatgaacaactcaaatattt 217177
>gb|AC166834.2| Mus musculus BAC clone RP23-158D24 from chromosome 7, complete sequence Length = 212016 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gtttctcacttttgtttttc 20 |||||||||||||||||||| Sbjct: 200514 gtttctcacttttgtttttc 200495
>dbj|AP005230.2| Homo sapiens genomic DNA, chromosome 18p, clone:RP11-620B7, complete sequence Length = 176526 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 acaactcaaatatttaaaga 119 |||||||||||||||||||| Sbjct: 166249 acaactcaaatatttaaaga 166268 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,574,532 Number of Sequences: 3902068 Number of extensions: 5574532 Number of successful extensions: 109727 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109427 Number of HSP's gapped (non-prelim): 298 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)