ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart31b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104192.1| Zea mays PCO077725 mRNA sequence 301 1e-78
2dbj|AK069095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 3e-76
3gb|M55191.1|POTPFPB Potato pyrophosphate-fructose 6-phosphate 1-... 176 5e-41
4gb|BT012702.1| Lycopersicon esculentum clone 113577R, mRNA sequence 168 1e-38
5ref|NM_101072.3| Arabidopsis thaliana 6-phosphofructokinase AT1G... 157 4e-35
6gb|AY093260.1| Arabidopsis thaliana similar to pyrophosphate-dep... 157 4e-35
7gb|AY062473.1| Arabidopsis thaliana Similar to pyrophosphate-dep... 157 4e-35
8gb|AF095520.1|AF095520 Citrus X paradisi pyrophosphate-dependent... 153 7e-34
9dbj|AK060464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
10ref|NM_116642.2| Arabidopsis thaliana 6-phosphofructokinase AT4G... 133 6e-28
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
12dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
13emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, ... 86 1e-13
14gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24 86 1e-13
15gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 ... 74 5e-10
16emb|Z32850.1|RCPDPBS R.communis gene for pyrophosphate-dependent... 58 3e-05
17gb|DQ239686.1| Brassica napus pyrophosphate-dependent phosphofru... 54 5e-04
18gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 52 0.002
19ref|XM_221882.3| PREDICTED: Rattus norvegicus guanylate binding ... 44 0.44
20gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete se... 42 1.8
21gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete seq... 42 1.8
22gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete se... 42 1.8
23gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete se... 42 1.8
24emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 ... 42 1.8
25gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete s... 42 1.8
26gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete seq... 42 1.8
27gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete se... 42 1.8
28emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on ch... 42 1.8
29gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete s... 42 1.8
30gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete se... 42 1.8
31gb|AC146589.31| Medicago truncatula clone mth2-145o21, complete ... 42 1.8
32gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete se... 42 1.8
33gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complet... 42 1.8
34gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, comple... 42 1.8
35gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, co... 40 6.9
36gb|AC112925.8| Mus musculus chromosome 5, clone RP23-136I18, com... 40 6.9
37gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incom... 40 6.9
38gb|AC163273.4| Mus musculus chromosome 5, clone RP24-396E18, com... 40 6.9
39gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 6.9
40gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete s... 40 6.9
41emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on ch... 40 6.9
42ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.9
43gb|AC068631.16| Homo sapiens 3 BAC RP11-134F2 (Roswell Park Canc... 40 6.9
44gb|AC117414.3| Homo sapiens 3 BAC RP11-48F14 (Roswell Park Cance... 40 6.9
45gb|AC121318.17| Mus musculus chromosome 1, clone RP24-377P1, com... 40 6.9
46gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, co... 40 6.9
47gb|AC087625.12| Homo sapiens chromosome 8, clone RP11-525O22, co... 40 6.9
48gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, com... 40 6.9
49ref|XM_311551.2| Anopheles gambiae str. PEST ENSANGP00000010229 ... 40 6.9
50gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, comple... 40 6.9
51dbj|AP006303.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 6.9
52dbj|AB020866.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 6.9 
>gb|AY104192.1| Zea mays PCO077725 mRNA sequence
          Length = 1688

 Score =  301 bits (152), Expect = 1e-78
 Identities = 263/300 (87%)
 Strand = Plus / Minus

                                                                        
Query: 197  tctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccagg 256
            |||||||| ||| || ||||| |||| ||||||||||||||||||| | |||||||||||
Sbjct: 1335 tctctataactcagcaccgagttccagcatcaaggtgtggttcgagtcatcgcttccagg 1276

                                                                        
Query: 257  gccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccg 316
            |||||||||||||||||| || ||||||||||||| ||||||||||||||| ||||||| 
Sbjct: 1275 gccgctgaactggatggggccagggctgatgtatctgttcttgatggcccactcatccct 1216

                                                                        
Query: 317  catcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcac 376
            || ||| ||| | ||||| || || |||||||| || || ||||||||||||||||||||
Sbjct: 1215 caacgatgcatatttcttgaaaggtgcagcatcgagttccaccatagccttcttgatcac 1156

                                                                        
Query: 377  tggcttgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctcc 436
            ||||||||||||||| ||||||||||||||||||||||  |  |||| ||| ||||| ||
Sbjct: 1155 tggcttgaacttgccgtgcctcctctcaacatccatcagtgatgtcaatgctgttccacc 1096

                                                                        
Query: 437  aacagtccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 496
            ||||||||||| ||| || ||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 1095 aacagtccattcttctactggagccgcaaggttgccaaccgacgaaataagtcctgtctt 1036
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>dbj|AK069095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004M14, full
            insert sequence
          Length = 1960

 Score =  293 bits (148), Expect = 3e-76
 Identities = 274/316 (86%)
 Strand = Plus / Minus

                                                                        
Query: 196  ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 255
            ||||||||  |||||||||||| ||||||||||||||||||||||   ||| ||||||||
Sbjct: 1776 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 1717

                                                                        
Query: 256  ggccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatccc 315
            |||| ||||||||||||||||| |||||||||||  ||||||||| || ||| ||||| |
Sbjct: 1716 ggccactgaactggatgggaccagggctgatgtaatggttcttgagggaccactcatctc 1657

                                                                        
Query: 316  gcatcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatca 375
            |||  || |||||||||||||| || ||  | ||||| || |||||||||||||||||||
Sbjct: 1656 gcaatgaagcaaacttcttaaacggtgccccgtcaagttccaccatagccttcttgatca 1597

                                                                        
Query: 376  ctggcttgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctc 435
            |||||||| |||| || |||||||||||||||||||||||||  |||| ||||||||| |
Sbjct: 1596 ctggcttgtactttccgtgcctcctctcaacatccatcaacgatgtcaatgcagttccac 1537

                                                                        
Query: 436  caacagtccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtct 495
            |||| ||||||| ||||||||||||||| ||||| ||||||||||  || ||||||||||
Sbjct: 1536 caacggtccattcttccacaggagcagcgaggttgccaaccgacgtaatcagtcctgtct 1477

                            
Query: 496  tgccaaactggagaag 511
            | ||| | ||||||||
Sbjct: 1476 tcccacattggagaag 1461
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>gb|M55191.1|POTPFPB Potato pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP)
            beta-subunit mRNA, complete cds
          Length = 1986

 Score =  176 bits (89), Expect = 5e-41
 Identities = 179/209 (85%)
 Strand = Plus / Minus

                                                                        
Query: 270  atgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaac 329
            |||||||| ||| | ||||||||||| || |  |||||||| |||| | | || ||||| 
Sbjct: 1676 atgggacctgggttaatgtatcggttgttaagagcccattcttccctctttgaagcaaat 1617

                                                                        
Query: 330  ttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttg 389
            ||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1616 ttcttgaatggagcaccttcaagctcaaccatagccttcttgatcactggcttgaacttg 1557

                                                                        
Query: 390  ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 449
            ||||| |||||||| || |||||||||||||| ||||| ||||| || || ||| ||| |
Sbjct: 1556 ccatgtctcctctctacgtccatcaacgcagtgagtgctgttccacctacggtcaattct 1497

                                         
Query: 450  tccacaggagcagccaggttaccaaccga 478
            || |||||||||||||  |||||||||||
Sbjct: 1496 tcaacaggagcagccaaattaccaaccga 1468
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>gb|BT012702.1| Lycopersicon esculentum clone 113577R, mRNA sequence
          Length = 1952

 Score =  168 bits (85), Expect = 1e-38
 Identities = 178/209 (85%)
 Strand = Plus / Minus

                                                                        
Query: 270  atgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaac 329
            |||||||| ||| | ||||||||||| || |  |||||||| |||| | | || ||||| 
Sbjct: 1715 atgggacctgggttaatgtatcggttgttaagagcccattcttccctctttgaagcaaat 1656

                                                                        
Query: 330  ttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttg 389
            ||||| ||||| ||| |  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1655 ttcttgaatggagcacctccaagctcaaccatagccttcttgatcactggcttgaacttg 1596

                                                                        
Query: 390  ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 449
            ||||| |||||||| || |||||||| ||||| ||||| ||||| || || ||||||| |
Sbjct: 1595 ccatgtctcctctctacgtccatcaatgcagtgagtgctgttccacctaccgtccattct 1536

                                         
Query: 450  tccacaggagcagccaggttaccaaccga 478
            || |||||||||||||  |||||||||||
Sbjct: 1535 tcaacaggagcagccaaattaccaaccga 1507
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>ref|NM_101072.3| Arabidopsis thaliana 6-phosphofructokinase AT1G12000 mRNA, complete
            cds
          Length = 2072

 Score =  157 bits (79), Expect = 4e-35
 Identities = 196/235 (83%)
 Strand = Plus / Minus

                                                                        
Query: 262  tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 321
            |||| ||||| ||||| |||||||||||||||||||| |  |||||||| || ||||  |
Sbjct: 1750 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1691

                                                                        
Query: 322  aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 381
            | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| ||||
Sbjct: 1690 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1631

                                                                        
Query: 382  tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 441
            ||||||| || || |||||||| ||||||||||| || || || ||||| || || ||||
Sbjct: 1630 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1571

                                                                   
Query: 442  tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 496
            |||||| ||||||||||||||||| ||| |||||||| || || ||||| |||||
Sbjct: 1570 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1516
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>gb|AY093260.1| Arabidopsis thaliana similar to pyrophosphate-dependent
            phosphofuctokinase beta subunit (At1g12000) mRNA,
            complete cds
          Length = 1733

 Score =  157 bits (79), Expect = 4e-35
 Identities = 196/235 (83%)
 Strand = Plus / Minus

                                                                        
Query: 262  tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 321
            |||| ||||| ||||| |||||||||||||||||||| |  |||||||| || ||||  |
Sbjct: 1642 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1583

                                                                        
Query: 322  aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 381
            | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| ||||
Sbjct: 1582 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1523

                                                                        
Query: 382  tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 441
            ||||||| || || |||||||| ||||||||||| || || || ||||| || || ||||
Sbjct: 1522 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1463

                                                                   
Query: 442  tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 496
            |||||| ||||||||||||||||| ||| |||||||| || || ||||| |||||
Sbjct: 1462 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1408
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>gb|AY062473.1| Arabidopsis thaliana Similar to pyrophosphate-dependent
            phosphofuctokinase beta subunit (At1g12000; F12F1.13)
            mRNA, complete cds
          Length = 1965

 Score =  157 bits (79), Expect = 4e-35
 Identities = 196/235 (83%)
 Strand = Plus / Minus

                                                                        
Query: 262  tgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcg 321
            |||| ||||| ||||| |||||||||||||||||||| |  |||||||| || ||||  |
Sbjct: 1750 tgaattggatcggacctgggctgatgtatcggttcttcaatgcccattcttcacgcagtg 1691

                                                                        
Query: 322  aggcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggct 381
            | || || ||||||||||| ||| | ||||| || ||||| || ||||||||||| ||||
Sbjct: 1690 atgcgaatttcttaaatggtgcaccttcaagttccaccattgctttcttgatcacaggct 1631

                                                                        
Query: 382  tgaacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacag 441
            ||||||| || || |||||||| ||||||||||| || || || ||||| || || ||||
Sbjct: 1630 tgaacttaccgtgtctcctctcgacatccatcaaggctgtgagagcagtcccacctacag 1571

                                                                   
Query: 442  tccattgttccacaggagcagccaggttaccaaccgacgagataagtcctgtctt 496
            |||||| ||||||||||||||||| ||| |||||||| || || ||||| |||||
Sbjct: 1570 tccattcttccacaggagcagccaagttcccaaccgaagaaattagtccggtctt 1516
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>gb|AF095520.1|AF095520 Citrus X paradisi pyrophosphate-dependent phosphofructokinase beta
            subunit (PPi-PFKb) mRNA, complete cds
          Length = 2034

 Score =  153 bits (77), Expect = 7e-34
 Identities = 164/193 (84%)
 Strand = Plus / Minus

                                                                        
Query: 273  ggaccggggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttc 332
            ||||| || |||||||| || || ||||  ||||| ||||| ||||| ||  ||||||||
Sbjct: 1681 ggaccaggactgatgtagcgattattgagagcccactcatctcgcatggatacaaacttc 1622

                                                                        
Query: 333  ttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttgaacttgcca 392
            || ||||| | | ||||||| || ||||| |||||||| ||||| |||||||||||||||
Sbjct: 1621 ttgaatggtgtaccatcaagttccaccatcgccttcttaatcacaggcttgaacttgcca 1562

                                                                        
Query: 393  tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 452
            || |||||||| |||||||| || ||||||||||||||||| | ||||||||||| ||||
Sbjct: 1561 tgtctcctctctacatccattaatgcagtcagtgcagttccactaacagtccattcttcc 1502

                         
Query: 453  acaggagcagcca 465
            || ||||||||||
Sbjct: 1501 actggagcagcca 1489
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>dbj|AK060464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C08, full
           insert sequence
          Length = 453

 Score =  143 bits (72), Expect = 6e-31
 Identities = 147/172 (85%)
 Strand = Plus / Minus

                                                                       
Query: 196 ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 255
           ||||||||  |||||||||||| ||||||||||||||||||||||   ||| ||||||||
Sbjct: 172 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 113

                                                                       
Query: 256 ggccgctgaactggatgggaccggggctgatgtatcggttcttgatggcccattcatccc 315
           |||| ||||||||||||||||| |||||||||||  ||||||||| || ||| ||||| |
Sbjct: 112 ggccactgaactggatgggaccagggctgatgtaatggttcttgagggaccactcatctc 53

                                                               
Query: 316 gcatcgaggcaaacttcttaaatggcgcagcatcaagctcaaccatagcctt 367
           |||  || |||||||||||||| || ||  | ||||| || |||||||||||
Sbjct: 52  gcaatgaagcaaacttcttaaacggtgccccgtcaagttccaccatagcctt 1
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>ref|NM_116642.2| Arabidopsis thaliana 6-phosphofructokinase AT4G04040 mRNA, complete
            cds
          Length = 1947

 Score =  133 bits (67), Expect = 6e-28
 Identities = 133/155 (85%)
 Strand = Plus / Minus

                                                                        
Query: 324  gcaaacttcttaaatggcgcagcatcaagctcaaccatagccttcttgatcactggcttg 383
            ||||| |||||||| || ||| | ||||| ||||||||||| |||||||| || ||||||
Sbjct: 1634 gcaaatttcttaaacggtgcaccttcaagttcaaccatagctttcttgataacaggcttg 1575

                                                                        
Query: 384  aacttgccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtc 443
            || || ||||| || ||||||||||||||||||| |||||||||||| || ||||| |||
Sbjct: 1574 aatttaccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtc 1515

                                               
Query: 444  cattgttccacaggagcagccaggttaccaaccga 478
            || | ||| ||||||||||||| ||| ||||||||
Sbjct: 1514 cactcttcaacaggagcagccaagtttccaaccga 1480
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  103 bits (52), Expect = 6e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                           
Query: 393     tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 452
               |||||||||||||||||||||||||  |||| ||||||||| ||||| ||||||| ||||
Sbjct: 7660685 tgcctcctctcaacatccatcaacgatgtcaatgcagttccaccaacggtccattcttcc 7660744

                                       
Query: 453     acaggagcagccaggttaccaacc 476
               ||||||||||| ||||| ||||||
Sbjct: 7660745 acaggagcagcgaggttgccaacc 7660768



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                           
Query: 196     ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 255
               ||||||||  |||||||||||| ||||||||||||||||||||||   ||| ||||||||
Sbjct: 7660088 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 7660147

                                     
Query: 256     ggccgctgaactggatgggacc 277
               |||| |||||||||||||||||
Sbjct: 7660148 ggccactgaactggatgggacc 7660169



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                        
Query: 348     tcaagctcaaccatagccttcttgatcactggcttgaactt 388
               ||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 7660420 tcaagttccaccatagccttcttgatcactggcttgtactt 7660460



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                          
Query: 279     gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 337
               |||||||||||  ||||||||| || ||| ||||| ||||  || ||||||||||||||
Sbjct: 7660262 gggctgatgtaatggttcttgagggaccactcatctcgcaatgaagcaaacttcttaaa 7660320
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>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1136_C11
          Length = 124827

 Score =  103 bits (52), Expect = 6e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                         
Query: 393   tgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttcc 452
             |||||||||||||||||||||||||  |||| ||||||||| ||||| ||||||| ||||
Sbjct: 83940 tgcctcctctcaacatccatcaacgatgtcaatgcagttccaccaacggtccattcttcc 83999

                                     
Query: 453   acaggagcagccaggttaccaacc 476
             ||||||||||| ||||| ||||||
Sbjct: 84000 acaggagcagcgaggttgccaacc 84023



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 74/82 (90%)
 Strand = Plus / Plus

                                                                         
Query: 196   ctctctatatctcggcgccgagctccaacatcaaggtgtggttcgaggcgtcgcttccag 255
             ||||||||  |||||||||||| ||||||||||||||||||||||   ||| ||||||||
Sbjct: 83343 ctctctatgcctcggcgccgagttccaacatcaaggtgtggttcgcatcgttgcttccag 83402

                                   
Query: 256   ggccgctgaactggatgggacc 277
             |||| |||||||||||||||||
Sbjct: 83403 ggccactgaactggatgggacc 83424



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 348   tcaagctcaaccatagccttcttgatcactggcttgaactt 388
             ||||| || ||||||||||||||||||||||||||| ||||
Sbjct: 83675 tcaagttccaccatagccttcttgatcactggcttgtactt 83715



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 279   gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 337
             |||||||||||  ||||||||| || ||| ||||| ||||  || ||||||||||||||
Sbjct: 83517 gggctgatgtaatggttcttgagggaccactcatctcgcaatgaagcaaacttcttaaa 83575
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>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11
          Length = 198022

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                         
Query: 390   ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 449
             ||||| || ||||||||||||||||||| |||||||||||| || ||||| ||||| | |
Sbjct: 57126 ccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtccactct 57067

                                        
Query: 450   tccacaggagcagccaggttaccaacc 476
             || ||||||||||||| ||| ||||||
Sbjct: 57066 tcaacaggagcagccaagtttccaacc 57040



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 348   tcaagctcaaccatagccttcttgatcactggcttgaa 385
             ||||| ||||||||||| |||||||| || ||||||||
Sbjct: 57247 tcaagttcaaccatagctttcttgataacaggcttgaa 57210
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>gb|AF075598.1|T24H24 Arabidopsis thaliana BAC T24H24
          Length = 88848

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                         
Query: 390   ccatgcctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgt 449
             ||||| || ||||||||||||||||||| |||||||||||| || ||||| ||||| | |
Sbjct: 60309 ccatgtcttctctcaacatccatcaacgaagtcagtgcagtaccaccaactgtccactct 60368

                                        
Query: 450   tccacaggagcagccaggttaccaacc 476
             || ||||||||||||| ||| ||||||
Sbjct: 60369 tcaacaggagcagccaagtttccaacc 60395



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 348   tcaagctcaaccatagccttcttgatcactggcttgaa 385
             ||||| ||||||||||| |||||||| || ||||||||
Sbjct: 60188 tcaagttcaaccatagctttcttgataacaggcttgaa 60225
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>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence
          Length = 123386

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                         
Query: 396   ctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttccaca 455
             |||||||| ||||||||||| || || || ||||| || || |||||||||| |||||||
Sbjct: 64016 ctcctctcgacatccatcaaggctgtgagagcagtcccacctacagtccattcttccaca 63957

                                  
Query: 456   ggagcagccaggttaccaacc 476
             |||||||||| ||| ||||||
Sbjct: 63956 ggagcagccaagttcccaacc 63936



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 279   gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaat 338
             |||||||||||||||||||| |  |||||||| || ||||  || || || |||||||||
Sbjct: 64301 gggctgatgtatcggttcttcaatgcccattcttcacgcagtgatgcgaatttcttaaat 64242

               
Query: 339   gg 340
             ||
Sbjct: 64241 gg 64240



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 348   tcaagctcaaccatagccttcttgatcactggcttgaactt 388
             ||||| || ||||| || ||||||||||| |||||||||||
Sbjct: 64149 tcaagttccaccattgctttcttgatcacaggcttgaactt 64109
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>emb|Z32850.1|RCPDPBS R.communis gene for pyrophosphate-dependent phosphofructokinase beta
            subunit
          Length = 5280

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 348  tcaagctcaaccatagccttcttgatcactggcttgaactt 388
            |||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 4606 tcaagctccaccatcgccttcttgatcacaggcttgaactt 4566



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 396  ctcctctcaacatccatcaacgcagtcagtgcagttcctccaacagtccattgttccaca 455
            ||||| || |||||||| || | |||||||||||| || ||||| ||||||| | |||||
Sbjct: 4243 ctcctttctacatccattaaagaagtcagtgcagtgccaccaactgtccattctgccaca 4184

                  
Query: 456  ggagca 461
            ||||||
Sbjct: 4183 ggagca 4178
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>gb|DQ239686.1| Brassica napus pyrophosphate-dependent phosphofructokinase-like
           gene, partial sequence
          Length = 428

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 279 gggctgatgtatcggttcttgatggcccattcatcccgcatcgaggcaaacttcttaaa 337
           |||||||||||||||||||| | ||||||||| || ||||  || ||||| ||||||||
Sbjct: 238 gggctgatgtatcggttcttcaaggcccattcctcgcgcagggatgcaaatttcttaaa 296
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>gb|AC150441.2| Medicago truncatula chromosome 2 BAC clone mth2-19l4, complete sequence
          Length = 120811

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 348   tcaagctcaaccatagccttcttgatcactggcttgaa 385
             |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 88087 tcaagctccaccattgccttcttgatcacaggcttgaa 88050



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 302   ggcccattcatcccgcatcgaggcaaactt 331
             |||||||||||||||||  |||||||||||
Sbjct: 88243 ggcccattcatcccgcaatgaggcaaactt 88214
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>ref|XM_221882.3| PREDICTED: Rattus norvegicus guanylate binding protein 1,
            interferon-inducible, 67kDa (predicted) (Gbp1_predicted),
            mRNA
          Length = 2343

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 154  aggaacaagaagaaaatttcaa 175
            ||||||||||||||||||||||
Sbjct: 2237 aggaacaagaagaaaatttcaa 2258
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>gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete sequence
          Length = 111561

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    acttaacccactccaactcaa 77
             |||||||||||||||||||||
Sbjct: 81258 acttaacccactccaactcaa 81238
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>gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete sequence
          Length = 66066

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 453   acaggagcagccaggttacca 473
             |||||||||||||||||||||
Sbjct: 32087 acaggagcagccaggttacca 32107
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>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence
          Length = 111678

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 453   acaggagcagccaggttacca 473
             |||||||||||||||||||||
Sbjct: 94700 acaggagcagccaggttacca 94720
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>gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete sequence
          Length = 68256

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 453  acaggagcagccaggttacca 473
            |||||||||||||||||||||
Sbjct: 8617 acaggagcagccaggttacca 8637
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>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3,
            complete sequence
          Length = 114380

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   acttaacccactccaactcaa 77
            |||||||||||||||||||||
Sbjct: 1298 acttaacccactccaactcaa 1318
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>gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete sequence
          Length = 143015

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    acttaacccactccaactcaa 77
             |||||||||||||||||||||
Sbjct: 57315 acttaacccactccaactcaa 57295
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>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence
          Length = 139116

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    acttaacccactccaactcaa 77
             |||||||||||||||||||||
Sbjct: 14778 acttaacccactccaactcaa 14758
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>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence
          Length = 110272

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    acttaacccactccaactcaa 77
             |||||||||||||||||||||
Sbjct: 22528 acttaacccactccaactcaa 22548
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>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete
             sequence
          Length = 180545

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 317   catcgaggcaaacttcttaaa 337
             |||||||||||||||||||||
Sbjct: 77544 catcgaggcaaacttcttaaa 77524
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>gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete sequence
          Length = 115074

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   acttaacccactccaactcaa 77
            |||||||||||||||||||||
Sbjct: 1985 acttaacccactccaactcaa 1965
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>gb|AC152351.7| Medicago truncatula clone mth2-75b20, complete sequence
          Length = 111786

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    acttaacccactccaactcaa 77
             |||||||||||||||||||||
Sbjct: 45944 acttaacccactccaactcaa 45964
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>gb|AC146589.31| Medicago truncatula clone mth2-145o21, complete sequence
          Length = 125457

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    acttaacccactccaactcaa 77
             |||||||||||||||||||||
Sbjct: 73213 acttaacccactccaactcaa 73233
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>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence
          Length = 107160

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    acttaacccactccaactcaa 77
             |||||||||||||||||||||
Sbjct: 75923 acttaacccactccaactcaa 75903
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>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence
          Length = 112123

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 326    aaacttcttaaatggcgcagc 346
              |||||||||||||||||||||
Sbjct: 101378 aaacttcttaaatggcgcagc 101358
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>gb|AC009480.4| Homo sapiens BAC clone RP11-295N18 from 2, complete sequence
          Length = 188353

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 392    atgcctcctctcaacatccat 412
              |||||||||||||||||||||
Sbjct: 140490 atgcctcctctcaacatccat 140510
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>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence
          Length = 197242

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   tctcaaaactgcaaggaaca 160
             ||||||||||||||||||||
Sbjct: 10339 tctcaaaactgcaaggaaca 10320
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>gb|AC112925.8| Mus musculus chromosome 5, clone RP23-136I18, complete sequence
          Length = 195433

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acatcttattaaacattcca 96
             ||||||||||||||||||||
Sbjct: 31371 acatcttattaaacattcca 31390
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>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility
             ribonuclease (S2-RNase) and S2-locus F-box protein (SLF2)
             genes, complete cds
          Length = 328473

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   agcatcaagctcaaccatagcctt 367
             ||||| ||||||||||||||||||
Sbjct: 67034 agcatgaagctcaaccatagcctt 67057



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   agcatcaagctcaaccatagcctt 367
             ||||| ||||||||||||||||||
Sbjct: 47113 agcatgaagctcaaccatagcctt 47090
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>gb|AC163273.4| Mus musculus chromosome 5, clone RP24-396E18, complete sequence
          Length = 136964

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    acatcttattaaacattcca 96
             ||||||||||||||||||||
Sbjct: 40502 acatcttattaaacattcca 40521
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>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1
             of 3 of the complete sequence
          Length = 106598

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    cccactccaactcaacatct 82
             ||||||||||||||||||||
Sbjct: 97173 cccactccaactcaacatct 97154
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>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence
          Length = 129102

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   atgcctcctctcaacatcca 411
             ||||||||||||||||||||
Sbjct: 64505 atgcctcctctcaacatcca 64524
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>emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on chromosome 13 Contains the
             5' end of the ITGBL1 gene for integrin, beta-like 1 (with
             EGF-like repeat domains), complete sequence
          Length = 149143

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    cccactccaactcaacatct 82
             ||||||||||||||||||||
Sbjct: 13544 cccactccaactcaacatct 13525
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>ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7364-PA
           (LOC587342), partial mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 caaggaacaagaagaaaatt 171
           ||||||||||||||||||||
Sbjct: 607 caaggaacaagaagaaaatt 588
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>gb|AC068631.16| Homo sapiens 3 BAC RP11-134F2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167137

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     ccactccaactcaacatctt 83
              ||||||||||||||||||||
Sbjct: 166676 ccactccaactcaacatctt 166657
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>gb|AC117414.3| Homo sapiens 3 BAC RP11-48F14 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 143721

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   ccactccaactcaacatctt 83
            ||||||||||||||||||||
Sbjct: 1544 ccactccaactcaacatctt 1525
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>gb|AC121318.17| Mus musculus chromosome 1, clone RP24-377P1, complete sequence
          Length = 179884

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    ctcaaccatagccttcttga 372
              ||||||||||||||||||||
Sbjct: 167232 ctcaaccatagccttcttga 167213
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>gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, complete sequence
          Length = 188389

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   ctcaaccatagccttcttga 372
             ||||||||||||||||||||
Sbjct: 29573 ctcaaccatagccttcttga 29554
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>gb|AC087625.12| Homo sapiens chromosome 8, clone RP11-525O22, complete sequence
          Length = 166763

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 149   ctgcaaggaacaagaagaaaattt 172
             ||||||| ||||||||||||||||
Sbjct: 52739 ctgcaagaaacaagaagaaaattt 52716
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>gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, complete sequence
          Length = 160835

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 149  ctgcaaggaacaagaagaaaattt 172
            ||||||| ||||||||||||||||
Sbjct: 9718 ctgcaagaaacaagaagaaaattt 9741
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>ref|XM_311551.2| Anopheles gambiae str. PEST ENSANGP00000010229 (ENSANGG00000007740),
            partial mRNA
          Length = 1257

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 365  cttcttgatcactggcttga 384
            ||||||||||||||||||||
Sbjct: 1155 cttcttgatcactggcttga 1136
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>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence
          Length = 187014

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    tctcaaaactgcaaggaaca 160
              ||||||||||||||||||||
Sbjct: 172201 tctcaaaactgcaaggaaca 172182
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>dbj|AP006303.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-285B2, complete
             sequence
          Length = 167054

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 149   ctgcaaggaacaagaagaaaattt 172
             ||||||| ||||||||||||||||
Sbjct: 97123 ctgcaagaaacaagaagaaaattt 97100
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>dbj|AB020866.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 9/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 149   ctgcaaggaacaagaagaaaattt 172
             ||||||| ||||||||||||||||
Sbjct: 75474 ctgcaagaaacaagaagaaaattt 75451


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,205,970
Number of Sequences: 3902068
Number of extensions: 4205970
Number of successful extensions: 81739
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81634
Number of HSP's gapped (non-prelim): 105
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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