ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart31a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473039.1| Oryza sativa (japonica cultivar-group), predic... 260 4e-66
2dbj|AK099684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
5emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa... 135 2e-28
6emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa... 135 2e-28
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
8emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 127 4e-26
9gb|BT016613.1| Zea mays clone Contig446 mRNA sequence 80 8e-12
10ref|NM_180202.1| Arabidopsis thaliana transporter AT3G07525 tran... 44 0.44
11ref|NM_180201.2| Arabidopsis thaliana transporter AT3G07525 tran... 44 0.44
12gb|AY142587.1| Arabidopsis thaliana unknown protein (At3g07525) ... 44 0.44
13gb|AY065244.1| Arabidopsis thaliana unknown protein (At3g07525) ... 44 0.44
14emb|BX818575.1|CNS0ACL7 Arabidopsis thaliana Full-length cDNA Co... 44 0.44
15emb|BX826098.1|CNS0A6FU Arabidopsis thaliana Full-length cDNA Co... 44 0.44
16gb|AC105451.3| Homo sapiens BAC clone RP11-121A15 from 4, comple... 44 0.44
17gb|AC016747.7| Homo sapiens BAC clone RP11-493E12 from 2, comple... 42 1.7
18gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, comple... 42 1.7
19gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P1... 40 6.9
20gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 6.9
21gb|AC132277.3| Mus musculus BAC clone RP24-344C7 from chromosome... 40 6.9
22emb|AL391728.19| Human DNA sequence from clone RP11-423A18 on ch... 40 6.9
23emb|AL356968.41| Human DNA sequence from clone RP11-329A14 on ch... 40 6.9
24emb|AL121893.21|HSA189K21 Human DNA sequence from clone RP11-189... 40 6.9
25emb|AL031227.1|DMC66A1 Drosophila melanogaster cosmid 66A1 40 6.9
26emb|AJ581527.1| Fowlpox virus (isolate HP-438[Munich]), passage ... 40 6.9
27gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell ... 40 6.9
28gb|AF165142.2| Homo sapiens chromosome 8 clone CTA-392C11 map ce... 40 6.9
29gb|AC023715.4| Drosophila melanogaster X BAC RP98-17H6 (Roswell ... 40 6.9
30gb|AC105999.4| Homo sapiens chromosome 8, clone CTA-392C11, comp... 40 6.9
31dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 40 6.9
32ref|NM_080333.2| Drosophila melanogaster partner of numb CG3346-... 40 6.9
33gb|AC148188.3| Saimiri boliviensis boliviensis clone CH254-64N20... 40 6.9
34gb|AY075515.1| Drosophila melanogaster RE65495 full length cDNA 40 6.9
35gb|AC091560.6| Homo sapiens chromosome 8, clone RP11-104D16, com... 40 6.9
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
37gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence 40 6.9
38gb|AF198100.1|AF198100 Fowlpox virus, complete genome 40 6.9
39dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
40dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
41gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 ... 40 6.9
42gb|AF091050.1|AF091050 Drosophila melanogaster Partner of Numb m... 40 6.9 
>ref|XM_473039.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 657

 Score =  260 bits (131), Expect = 4e-66
 Identities = 278/327 (85%)
 Strand = Plus / Minus

                                                                       
Query: 181 ctatgaattgcaataaagcttaagcgggatcttcaatcctactgcctgaccaaccacaga 240
           |||||||||||||| ||||  ||| ||||| ||||||||||||||||| |||||||||| 
Sbjct: 657 ctatgaattgcaatgaagcccaagtgggattttcaatcctactgcctggccaaccacagt 598

                                                                       
Query: 241 taaccatgctgacaagtattgcagagatcgatccttgtctcccagtttatgaagaagcaa 300
           || ||| ||||  |||||| |||    | |||||||||||  || |   | |||||| ||
Sbjct: 597 tagccaagctggtaagtatcgcacttgttgatccttgtcttgcattccttcaagaagtaa 538

                                                                       
Query: 301 cttcatccagtcactggttccacatggatgcaaggtgaaccatggcctacttaggtgggg 360
           |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |  |||||
Sbjct: 537 cttcatacagtcactggttccacagggatgcaaagtgaaccatggcctactaaaatgggg 478

                                                                       
Query: 361 atgctcctctcgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgaga 420
           ||||||||||||||||||||| |||||| ||||||||  ||| || |  |||||  ||||
Sbjct: 477 atgctcctctcgagtaataaacgtccaccttgattcgcctaataatttgagtgagagaga 418

                                                                       
Query: 421 aggaagatccttttttatctcatctaaagttagcagctgcccaccagactgaagaccttg 480
           |||||| |||| ||| |||||||||| |||||||||||| |||||||||||| |||| ||
Sbjct: 417 aggaaggtcctctttaatctcatctagagttagcagctggccaccagactgatgaccctg 358

                                      
Query: 481 aaagtatagcaccggaaccttgtaaga 507
           |||||||||||| ||||||||||||||
Sbjct: 357 aaagtatagcactggaaccttgtaaga 331
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>dbj|AK099684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072A20, full
           insert sequence
          Length = 1406

 Score =  145 bits (73), Expect = 2e-31
 Identities = 121/137 (88%)
 Strand = Plus / Minus

                                                                       
Query: 371 cgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgagaaggaagatcc 430
           |||||||||||||||||||| |||||   ||| || | |||||| ||||||||||| |||
Sbjct: 884 cgagtaataaatgtccacttcgattcacctaataatttaagtgagtgagaaggaaggtcc 825

                                                                       
Query: 431 ttttttatctcatctaaagttagcagctgcccaccagactgaagaccttgaaagtatagc 490
           | |||||||||||||| |||||||||||| ||||||| |||| |||| ||||||||||||
Sbjct: 824 tcttttatctcatctagagttagcagctggccaccagcctgatgaccctgaaagtatagc 765

                            
Query: 491 accggaaccttgtaaga 507
           || ||||||||||||||
Sbjct: 764 actggaaccttgtaaga 748



 Score =  135 bits (68), Expect = 2e-28
 Identities = 149/176 (84%)
 Strand = Plus / Minus

                                                                        
Query: 193  ataaagcttaagcgggatcttcaatcctactgcctgaccaaccacagataaccatgctga 252
            |||||||| ||| ||||| |||| |||||||||||| ||||||||||||| |||||| | 
Sbjct: 1088 ataaagctcaagtgggattttcagtcctactgcctggccaaccacagatagccatgccgg 1029

                                                                        
Query: 253  caagtattgcagagatcgatccttgtctcccagtttatgaagaagcaacttcatccagtc 312
             |||||||||| |  | ||||||||| | ||| |   | |||||| |||||||| |||||
Sbjct: 1028 taagtattgcacatgttgatccttgttttccactccttcaagaagtaacttcatacagtc 969

                                                                    
Query: 313  actggttccacatggatgcaaggtgaaccatggcctacttaggtggggatgctcct 368
            |||||||||||| |||||||| ||||||||||||||||| |  |||||||||||||
Sbjct: 968  actggttccacagggatgcaaagtgaaccatggcctactaaaatggggatgctcct 913
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  135 bits (68), Expect = 2e-28
 Identities = 149/176 (84%)
 Strand = Plus / Minus

                                                                            
Query: 193      ataaagcttaagcgggatcttcaatcctactgcctgaccaaccacagataaccatgctga 252
                |||||||| ||| ||||| |||| |||||||||||| ||||||||||||| |||||| | 
Sbjct: 19483524 ataaagctcaagtgggattttcagtcctactgcctggccaaccacagatagccatgccgg 19483465

                                                                            
Query: 253      caagtattgcagagatcgatccttgtctcccagtttatgaagaagcaacttcatccagtc 312
                 |||||||||| |  | ||||||||| | ||| |   | |||||| |||||||| |||||
Sbjct: 19483464 taagtattgcacatgttgatccttgttttccactccttcaagaagtaacttcatacagtc 19483405

                                                                        
Query: 313      actggttccacatggatgcaaggtgaaccatggcctacttaggtggggatgctcct 368
                |||||||||||| |||||||| ||||||||||||||||| |  |||||||||||||
Sbjct: 19483404 actggttccacagggatgcaaagtgaaccatggcctactaaaatggggatgctcct 19483349



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                            
Query: 366      cctctcgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgagaaggaa 425
                |||| |||||||||||||||||||| |||||   ||| || | |||||| ||||||||||
Sbjct: 19483235 cctcccgagtaataaatgtccacttcgattcacctaataatttaagtgagtgagaaggaa 19483176

                                                        
Query: 426      gatccttttttatctcatctaaagttagcagctgcccacc 465
                | |||| |||||||||||||| |||||||||||| |||||
Sbjct: 19483175 ggtcctcttttatctcatctagagttagcagctggccacc 19483136



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 463      accagactgaagaccttgaaagtatagcaccggaaccttgtaaga 507
                ||||| |||| |||| |||||||||||||| ||||||||||||||
Sbjct: 19483060 accagcctgatgaccctgaaagtatagcactggaaccttgtaaga 19483016
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  135 bits (68), Expect = 2e-28
 Identities = 149/176 (84%)
 Strand = Plus / Minus

                                                                            
Query: 193      ataaagcttaagcgggatcttcaatcctactgcctgaccaaccacagataaccatgctga 252
                |||||||| ||| ||||| |||| |||||||||||| ||||||||||||| |||||| | 
Sbjct: 19409737 ataaagctcaagtgggattttcagtcctactgcctggccaaccacagatagccatgccgg 19409678

                                                                            
Query: 253      caagtattgcagagatcgatccttgtctcccagtttatgaagaagcaacttcatccagtc 312
                 |||||||||| |  | ||||||||| | ||| |   | |||||| |||||||| |||||
Sbjct: 19409677 taagtattgcacatgttgatccttgttttccactccttcaagaagtaacttcatacagtc 19409618

                                                                        
Query: 313      actggttccacatggatgcaaggtgaaccatggcctacttaggtggggatgctcct 368
                |||||||||||| |||||||| ||||||||||||||||| |  |||||||||||||
Sbjct: 19409617 actggttccacagggatgcaaagtgaaccatggcctactaaaatggggatgctcct 19409562



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                            
Query: 366      cctctcgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgagaaggaa 425
                |||| |||||||||||||||||||| |||||   ||| || | |||||| ||||||||||
Sbjct: 19409448 cctcccgagtaataaatgtccacttcgattcacctaataatttaagtgagtgagaaggaa 19409389

                                                        
Query: 426      gatccttttttatctcatctaaagttagcagctgcccacc 465
                | |||| |||||||||||||| |||||||||||| |||||
Sbjct: 19409388 ggtcctcttttatctcatctagagttagcagctggccacc 19409349



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 463      accagactgaagaccttgaaagtatagcaccggaaccttgtaaga 507
                ||||| |||| |||| |||||||||||||| ||||||||||||||
Sbjct: 19409273 accagcctgatgaccctgaaagtatagcactggaaccttgtaaga 19409229
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>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 163490

 Score =  135 bits (68), Expect = 2e-28
 Identities = 149/176 (84%)
 Strand = Plus / Minus

                                                                          
Query: 193    ataaagcttaagcgggatcttcaatcctactgcctgaccaaccacagataaccatgctga 252
              |||||||| ||| ||||| |||| |||||||||||| ||||||||||||| |||||| | 
Sbjct: 161218 ataaagctcaagtgggattttcagtcctactgcctggccaaccacagatagccatgccgg 161159

                                                                          
Query: 253    caagtattgcagagatcgatccttgtctcccagtttatgaagaagcaacttcatccagtc 312
               |||||||||| |  | ||||||||| | ||| |   | |||||| |||||||| |||||
Sbjct: 161158 taagtattgcacatgttgatccttgttttccactccttcaagaagtaacttcatacagtc 161099

                                                                      
Query: 313    actggttccacatggatgcaaggtgaaccatggcctacttaggtggggatgctcct 368
              |||||||||||| |||||||| ||||||||||||||||| |  |||||||||||||
Sbjct: 161098 actggttccacagggatgcaaagtgaaccatggcctactaaaatggggatgctcct 161043



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                          
Query: 366    cctctcgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgagaaggaa 425
              |||| |||||||||||||||||||| |||||   ||| || | |||||| ||||||||||
Sbjct: 160929 cctcccgagtaataaatgtccacttcgattcacctaataatttaagtgagtgagaaggaa 160870

                                                      
Query: 426    gatccttttttatctcatctaaagttagcagctgcccacc 465
              | |||| |||||||||||||| |||||||||||| |||||
Sbjct: 160869 ggtcctcttttatctcatctagagttagcagctggccacc 160830



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 463    accagactgaagaccttgaaagtatagcaccggaaccttgtaaga 507
              ||||| |||| |||| |||||||||||||| ||||||||||||||
Sbjct: 160754 accagcctgatgaccctgaaagtatagcactggaaccttgtaaga 160710
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>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144596

 Score =  135 bits (68), Expect = 2e-28
 Identities = 149/176 (84%)
 Strand = Plus / Minus

                                                                         
Query: 193   ataaagcttaagcgggatcttcaatcctactgcctgaccaaccacagataaccatgctga 252
             |||||||| ||| ||||| |||| |||||||||||| ||||||||||||| |||||| | 
Sbjct: 15705 ataaagctcaagtgggattttcagtcctactgcctggccaaccacagatagccatgccgg 15646

                                                                         
Query: 253   caagtattgcagagatcgatccttgtctcccagtttatgaagaagcaacttcatccagtc 312
              |||||||||| |  | ||||||||| | ||| |   | |||||| |||||||| |||||
Sbjct: 15645 taagtattgcacatgttgatccttgttttccactccttcaagaagtaacttcatacagtc 15586

                                                                     
Query: 313   actggttccacatggatgcaaggtgaaccatggcctacttaggtggggatgctcct 368
             |||||||||||| |||||||| ||||||||||||||||| |  |||||||||||||
Sbjct: 15585 actggttccacagggatgcaaagtgaaccatggcctactaaaatggggatgctcct 15530



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                         
Query: 366   cctctcgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgagaaggaa 425
             |||| |||||||||||||||||||| |||||   ||| || | |||||| ||||||||||
Sbjct: 15416 cctcccgagtaataaatgtccacttcgattcacctaataatttaagtgagtgagaaggaa 15357

                                                     
Query: 426   gatccttttttatctcatctaaagttagcagctgcccacc 465
             | |||| |||||||||||||| |||||||||||| |||||
Sbjct: 15356 ggtcctcttttatctcatctagagttagcagctggccacc 15317



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 463   accagactgaagaccttgaaagtatagcaccggaaccttgtaaga 507
             ||||| |||| |||| |||||||||||||| ||||||||||||||
Sbjct: 15241 accagcctgatgaccctgaaagtatagcactggaaccttgtaaga 15197
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  127 bits (64), Expect = 4e-26
 Identities = 157/188 (83%)
 Strand = Plus / Plus

                                                                            
Query: 181      ctatgaattgcaataaagcttaagcgggatcttcaatcctactgcctgaccaaccacaga 240
                |||||||||||||| ||||  ||| ||||| ||||||||||||||||| |||||||||| 
Sbjct: 24851496 ctatgaattgcaatgaagcccaagtgggattttcaatcctactgcctggccaaccacagt 24851555

                                                                            
Query: 241      taaccatgctgacaagtattgcagagatcgatccttgtctcccagtttatgaagaagcaa 300
                || ||| ||||  |||||| |||    | |||||||||||  || |   | |||||| ||
Sbjct: 24851556 tagccaagctggtaagtatcgcacttgttgatccttgtcttgcattccttcaagaagtaa 24851615

                                                                            
Query: 301      cttcatccagtcactggttccacatggatgcaaggtgaaccatggcctacttaggtgggg 360
                |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |  |||||
Sbjct: 24851616 cttcatacagtcactggttccacagggatgcaaagtgaaccatggcctactaaaatgggg 24851675

                        
Query: 361      atgctcct 368
                ||||||||
Sbjct: 24851676 atgctcct 24851683



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                            
Query: 366      cctctcgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgagaaggaa 425
                |||||||||||||||| |||||| ||||||||  ||| || |  |||||  |||||||||
Sbjct: 24851784 cctctcgagtaataaacgtccaccttgattcgcctaataatttgagtgagagagaaggaa 24851843

                                                        
Query: 426      gatccttttttatctcatctaaagttagcagctgcccacc 465
                | |||| ||| |||||||||| |||||||||||| |||||
Sbjct: 24851844 ggtcctctttaatctcatctagagttagcagctggccacc 24851883



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 463      accagactgaagaccttgaaagtatagcaccggaaccttgtaaga 507
                |||||||||| |||| |||||||||||||| ||||||||||||||
Sbjct: 24851962 accagactgatgaccctgaaagtatagcactggaaccttgtaaga 24852006
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score =  127 bits (64), Expect = 4e-26
 Identities = 157/188 (83%)
 Strand = Plus / Plus

                                                                          
Query: 181    ctatgaattgcaataaagcttaagcgggatcttcaatcctactgcctgaccaaccacaga 240
              |||||||||||||| ||||  ||| ||||| ||||||||||||||||| |||||||||| 
Sbjct: 113212 ctatgaattgcaatgaagcccaagtgggattttcaatcctactgcctggccaaccacagt 113271

                                                                          
Query: 241    taaccatgctgacaagtattgcagagatcgatccttgtctcccagtttatgaagaagcaa 300
              || ||| ||||  |||||| |||    | |||||||||||  || |   | |||||| ||
Sbjct: 113272 tagccaagctggtaagtatcgcacttgttgatccttgtcttgcattccttcaagaagtaa 113331

                                                                          
Query: 301    cttcatccagtcactggttccacatggatgcaaggtgaaccatggcctacttaggtgggg 360
              |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |  |||||
Sbjct: 113332 cttcatacagtcactggttccacagggatgcaaagtgaaccatggcctactaaaatgggg 113391

                      
Query: 361    atgctcct 368
              ||||||||
Sbjct: 113392 atgctcct 113399



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                          
Query: 366    cctctcgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgagaaggaa 425
              |||||||||||||||| |||||| ||||||||  ||| || |  |||||  |||||||||
Sbjct: 113500 cctctcgagtaataaacgtccaccttgattcgcctaataatttgagtgagagagaaggaa 113559

                                                      
Query: 426    gatccttttttatctcatctaaagttagcagctgcccacc 465
              | |||| ||| |||||||||| |||||||||||| |||||
Sbjct: 113560 ggtcctctttaatctcatctagagttagcagctggccacc 113599



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                           
Query: 463    accagactgaagaccttgaaagtatagcaccggaaccttgtaaga 507
              |||||||||| |||| |||||||||||||| ||||||||||||||
Sbjct: 113678 accagactgatgaccctgaaagtatagcactggaaccttgtaaga 113722
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>gb|BT016613.1| Zea mays clone Contig446 mRNA sequence
          Length = 1233

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 133/164 (81%)
 Strand = Plus / Minus

                                                                       
Query: 301 cttcatccagtcactggttccacatggatgcaaggtgaaccatggcctacttaggtgggg 360
           |||||||||  |||||||| |||| || |||| ||  | ||||||| | ||||  |||||
Sbjct: 801 cttcatccaaccactggttgcacaggggtgcagggccagccatggcttgcttaaatgggg 742

                                                                       
Query: 361 atgctcctctcgagtaataaatgtccactttgattcgtttaacaactgaagtgaatgaga 420
            ||||||||| |||||||||| ||||||||||||||  |||| |  |   |||| || ||
Sbjct: 741 gtgctcctcttgagtaataaacgtccactttgattcacttaatactttctgtgagtggga 682

                                                       
Query: 421 aggaagatccttttttatctcatctaaagttagcagctgcccac 464
           ||||||| ||| ||||| |||||||| |||||| ||||||||||
Sbjct: 681 aggaagaccctcttttacctcatctagagttagtagctgcccac 638



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 196 aagcttaagcgggatcttcaatcctactgcctgaccaaccacagataaccatgc 249
           ||||| ||| ||||| |||| |||||||||||| |||||||| |||||||||||
Sbjct: 912 aagctcaagagggattttcagtcctactgcctggccaaccacggataaccatgc 859
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>ref|NM_180202.1| Arabidopsis thaliana transporter AT3G07525 transcript variant
           AT3G07525.2 mRNA, complete cds
          Length = 837

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 ggatgctcctctcgagtaataaatgtccactttgattc 396
           |||||||||||| |||| ||||| |||||||| |||||
Sbjct: 522 ggatgctcctcttgagttataaaagtccacttagattc 485
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>ref|NM_180201.2| Arabidopsis thaliana transporter AT3G07525 transcript variant
           AT3G07525.1 mRNA, complete cds
          Length = 889

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 ggatgctcctctcgagtaataaatgtccactttgattc 396
           |||||||||||| |||| ||||| |||||||| |||||
Sbjct: 554 ggatgctcctcttgagttataaaagtccacttagattc 517
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>gb|AY142587.1| Arabidopsis thaliana unknown protein (At3g07525) mRNA, complete cds
          Length = 709

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 ggatgctcctctcgagtaataaatgtccactttgattc 396
           |||||||||||| |||| ||||| |||||||| |||||
Sbjct: 497 ggatgctcctcttgagttataaaagtccacttagattc 460
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>gb|AY065244.1| Arabidopsis thaliana unknown protein (At3g07525) mRNA, complete cds
          Length = 850

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 ggatgctcctctcgagtaataaatgtccactttgattc 396
           |||||||||||| |||| ||||| |||||||| |||||
Sbjct: 519 ggatgctcctcttgagttataaaagtccacttagattc 482
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>emb|BX818575.1|CNS0ACL7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL86ZD09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 820

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 ggatgctcctctcgagtaataaatgtccactttgattc 396
           |||||||||||| |||| ||||| |||||||| |||||
Sbjct: 554 ggatgctcctcttgagttataaaagtccacttagattc 517
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>emb|BX826098.1|CNS0A6FU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZE12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 877

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 ggatgctcctctcgagtaataaatgtccactttgattc 396
           |||||||||||| |||| ||||| |||||||| |||||
Sbjct: 542 ggatgctcctcttgagttataaaagtccacttagattc 505
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>gb|AC105451.3| Homo sapiens BAC clone RP11-121A15 from 4, complete sequence
          Length = 155702

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 409   aagtgaatgagaaggaagatcctttt 434
             ||||||| ||||||||||||||||||
Sbjct: 42184 aagtgaaggagaaggaagatcctttt 42209
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>gb|AC016747.7| Homo sapiens BAC clone RP11-493E12 from 2, complete sequence
          Length = 152345

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 128    ggaacatccacatgacaatgg 148
              |||||||||||||||||||||
Sbjct: 110387 ggaacatccacatgacaatgg 110367
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>gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, complete sequence
          Length = 201971

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 90     gtgaacacttcccatttcact 110
              |||||||||||||||||||||
Sbjct: 144851 gtgaacacttcccatttcact 144871
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>gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P15, complete sequence
          Length = 130539

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    aaagtagttattgcattgcaaaat 36
             ||||| ||||||||||||||||||
Sbjct: 71860 aaagttgttattgcattgcaaaat 71837
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 13      aaagtagttattgcattgcaaaat 36
               ||||| ||||||||||||||||||
Sbjct: 1483582 aaagttgttattgcattgcaaaat 1483559
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>gb|AC132277.3| Mus musculus BAC clone RP24-344C7 from chromosome 9, complete sequence
          Length = 175852

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aacatatacaaagcaatata 82
              ||||||||||||||||||||
Sbjct: 146686 aacatatacaaagcaatata 146705
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>emb|AL391728.19| Human DNA sequence from clone RP11-423A18 on chromosome 1 Contains part
             of gene KIAA1365 and the PIN1L gene for protein
             (peptidyl-prolyl cis/trans isomerase) NIMA-interacting
             1-like, complete sequence
          Length = 153750

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     acagataaaataaaagtagttatt 24
             ||||| ||||||||||||||||||
Sbjct: 27006 acagacaaaataaaagtagttatt 26983
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>emb|AL356968.41| Human DNA sequence from clone RP11-329A14 on chromosome 1 Contains the
             5' end of the SPATA6 gene for spermatogenesis associated
             6, an amyotrophic lateral sclerosis 2 (juvenile)
             chromosome region, candidate 2 (ALS2CR2) pseudogene, a
             ribosomal protein L21 (RPL21) pseudogene and a CpG island,
             complete sequence
          Length = 173373

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    acttcccatttcactgacca 115
             ||||||||||||||||||||
Sbjct: 93423 acttcccatttcactgacca 93404
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>emb|AL121893.21|HSA189K21 Human DNA sequence from clone RP11-189K21 on chromosome 20 Contains the
             5' end of the C20orf12 gene for chromosome 20 open reading
             frame 12, the GCNT1P gene for glucosaminyl (N-acetyl)
             transferase 1 core 2 (beta-1,6-N-acetylglucosaminyl
             transferase pseudogene, the POLR3F gene for RNA polymerase
             III (DNA directed) polypeptide F (39 kDa), the RPL21P3
             gene for ribosomal protein L21 pseudogene 3, the RBBP9
             gene for retinoblastoma binding protein 9, the 5' end of
             the SEC23B gene for Sec23 (S. cerevisae) homolog B, the
             RPS19P1 gene for ribosomal protein S19 pseudogene 1 and
             three CpG islands, complete sequence
          Length = 151136

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     cagataaaataaaagtagtt 21
             ||||||||||||||||||||
Sbjct: 57116 cagataaaataaaagtagtt 57135
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>emb|AL031227.1|DMC66A1 Drosophila melanogaster cosmid 66A1
          Length = 34127

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 452 agcagctgcccaccagactgaaga 475
           |||||||||||||||| |||||||
Sbjct: 352 agcagctgcccaccagcctgaaga 329
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>emb|AJ581527.1| Fowlpox virus (isolate HP-438[Munich]), passage 438 clone FP9, complete
              genome
          Length = 266145

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     aacatatacaaagcaatata 82
              ||||||||||||||||||||
Sbjct: 185196 aacatatacaaagcaatata 185177
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>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 167097

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 452   agcagctgcccaccagactgaaga 475
             |||||||||||||||| |||||||
Sbjct: 25879 agcagctgcccaccagcctgaaga 25856
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>gb|AF165142.2| Homo sapiens chromosome 8 clone CTA-392C11 map cen, complete sequence
          Length = 105496

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gtagttattgcattgcaaaa 35
             ||||||||||||||||||||
Sbjct: 21774 gtagttattgcattgcaaaa 21755
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>gb|AC023715.4| Drosophila melanogaster X BAC RP98-17H6 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 160629

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 452  agcagctgcccaccagactgaaga 475
            |||||||||||||||| |||||||
Sbjct: 7155 agcagctgcccaccagcctgaaga 7178
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>gb|AC105999.4| Homo sapiens chromosome 8, clone CTA-392C11, complete sequence
          Length = 105495

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    gtagttattgcattgcaaaa 35
             ||||||||||||||||||||
Sbjct: 83728 gtagttattgcattgcaaaa 83747
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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    aagaagcaacttcatccagt 311
              ||||||||||||||||||||
Sbjct: 928534 aagaagcaacttcatccagt 928515
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>ref|NM_080333.2| Drosophila melanogaster partner of numb CG3346-RA (pon), mRNA
          Length = 2589

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 452 agcagctgcccaccagactgaaga 475
           |||||||||||||||| |||||||
Sbjct: 770 agcagctgcccaccagcctgaaga 793
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>gb|AC148188.3| Saimiri boliviensis boliviensis clone CH254-64N20, complete sequence
          Length = 194092

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    acatatacaaagcaatataa 83
             ||||||||||||||||||||
Sbjct: 79508 acatatacaaagcaatataa 79527
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>gb|AY075515.1| Drosophila melanogaster RE65495 full length cDNA
          Length = 2605

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 452 agcagctgcccaccagactgaaga 475
           |||||||||||||||| |||||||
Sbjct: 770 agcagctgcccaccagcctgaaga 793
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>gb|AC091560.6| Homo sapiens chromosome 8, clone RP11-104D16, complete sequence
          Length = 190283

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     gtagttattgcattgcaaaa 35
              ||||||||||||||||||||
Sbjct: 143217 gtagttattgcattgcaaaa 143198
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 288      tatgaagaagcaacttcatc 307
                ||||||||||||||||||||
Sbjct: 16153475 tatgaagaagcaacttcatc 16153494
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>gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence
          Length = 144092

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    ggtgaacacttcccatttcactga 112
             ||||||||| ||||||||||||||
Sbjct: 17057 ggtgaacacgtcccatttcactga 17034
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>gb|AF198100.1|AF198100 Fowlpox virus, complete genome
          Length = 288539

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     aacatatacaaagcaatata 82
              ||||||||||||||||||||
Sbjct: 196040 aacatatacaaagcaatata 196021
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>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0556H01
          Length = 149800

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   tatgaagaagcaacttcatc 307
             ||||||||||||||||||||
Sbjct: 58076 tatgaagaagcaacttcatc 58095
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>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1328_D07
          Length = 155007

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    tatgaagaagcaacttcatc 307
              ||||||||||||||||||||
Sbjct: 153688 tatgaagaagcaacttcatc 153707
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>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete
              sequence
          Length = 310993

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 452    agcagctgcccaccagactgaaga 475
              |||||||||||||||| |||||||
Sbjct: 247820 agcagctgcccaccagcctgaaga 247843
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>gb|AF091050.1|AF091050 Drosophila melanogaster Partner of Numb mRNA, complete cds
          Length = 2926

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 452 agcagctgcccaccagactgaaga 475
           |||||||||||||||| |||||||
Sbjct: 849 agcagctgcccaccagcctgaaga 872


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,631,642
Number of Sequences: 3902068
Number of extensions: 5631642
Number of successful extensions: 97271
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97041
Number of HSP's gapped (non-prelim): 222
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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