>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
           (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
           proliferator-activated receptor A-interacting complex
           320 kDa protein) (PPAR-alpha-interacting complex protein
           320 kDa)
          Length = 2885

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +1

Query: 265 SCSLTTHRSNSQLELQHHHKVLGHVSTGNLI*ILSNLC--HTSALSIANTQLSNLAGSLH 438
           SCS+    SNSQ    H+    GHVS  +L+   + L   HT      N  LS+ AGS  
Sbjct: 259 SCSV----SNSQQFPSHYSFSSGHVSPSSLLQSSAGLAPGHT------NQALSDFAGSNS 308

Query: 439 RNPHR 453
            +PHR
Sbjct: 309 FSPHR 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,532,946
Number of Sequences: 219361
Number of extensions: 1402216
Number of successful extensions: 3620
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3616
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)