ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart31a06 |
|---|---|
| Clone Library Name | barley_pub |
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 35.8 bits (81), Expect = 0.068 Identities = 23/101 (22%), Positives = 49/101 (48%) Frame = -3 Query: 482 IRDAVARVDAEYIQSFVDFGSVADAAGEELPATAAVNGTMFCPDLEVDSSLGFRFNQIDF 303 +++A+ +D +Y++S +D G +P + T++ P++ V+S + +DF Sbjct: 337 VQEALKGLDDDYLRSAIDH--TESKPGLPVPYMGSPEKTLY-PNVLVNSWGRIPYQAMDF 393 Query: 302 GAGPPSAFVTPDLPNEGLMIFLPSCTASGGVDLVMAIPEDH 180 G G P+ F ++ +G +PS G + L + + H Sbjct: 394 GWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSH 434
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 33.5 bits (75), Expect = 0.34 Identities = 22/101 (21%), Positives = 48/101 (47%) Frame = -3 Query: 482 IRDAVARVDAEYIQSFVDFGSVADAAGEELPATAAVNGTMFCPDLEVDSSLGFRFNQIDF 303 +++A+ +D +Y++S +D +P + T++ P++ V+S + +DF Sbjct: 338 VQEALKGLDDDYLRSAIDH--TESKPDLPVPYMGSPEKTLY-PNVLVNSWGRIPYQAMDF 394 Query: 302 GAGPPSAFVTPDLPNEGLMIFLPSCTASGGVDLVMAIPEDH 180 G G P+ F ++ +G +PS G + L + + H Sbjct: 395 GWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSH 435
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 33.1 bits (74), Expect = 0.44 Identities = 22/101 (21%), Positives = 48/101 (47%) Frame = -3 Query: 482 IRDAVARVDAEYIQSFVDFGSVADAAGEELPATAAVNGTMFCPDLEVDSSLGFRFNQIDF 303 +++A+ +D +Y++S +D +P + T++ P++ V+S + +DF Sbjct: 337 VQEALKGLDDDYLRSAIDH--TESKPDLPVPYMGSPEKTLY-PNVLVNSWGRIPYQAMDF 393 Query: 302 GAGPPSAFVTPDLPNEGLMIFLPSCTASGGVDLVMAIPEDH 180 G G P+ F ++ +G +PS G + L + + H Sbjct: 394 GWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSH 434
>URE1_NOCFA (Q5YWR8) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 573 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 223 AVHDGKKIMRPSLGRSGVTNADGGP 297 AV G K++R S+G+S T ADG P Sbjct: 47 AVFGGGKVLRESMGQSRATRADGAP 71
>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2364 Score = 30.4 bits (67), Expect = 2.9 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Frame = -3 Query: 449 YIQSFVDFGSVADAAG--EELPATAAVNGTMFCPDLEVDSSLGFRFNQIDFGAGPPSAFV 276 Y ++ V + +A+G P + T DLE S LG + F GP Sbjct: 1939 YPEAEVGASAAPEASGGASGSPNLSETTSTFHEADLEGTSGLGVSGSPSAFPEGPTEGLA 1998 Query: 275 TPDLPNEGLMIFLPSCTASG 216 TP++ E F S ASG Sbjct: 1999 TPEVSGESTTAFDVSVEASG 2018
>ADH2_ENTHI (Q24803) Aldehyde-alcohol dehydrogenase 2 [Includes: Alcohol| dehydrogenase (EC 1.1.1.1) (ADH); Acetaldehyde dehydrogenase (EC 1.2.1.10) (ACDH)] Length = 870 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -3 Query: 284 AFVTPDLPNEGLMIFLPSCTASGGVDLVMAIPEDHDTATFYTLAD 150 AF P + + +I +P+ + +G A+ DH+T Y LAD Sbjct: 590 AFKFPTMGKKARLICIPTTSGTGSEVTPFAVISDHETGKKYPLAD 634
>SPEE_METJA (Q57761) Probable spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 293 Score = 29.3 bits (64), Expect = 6.4 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 366 CAVDRRRGRELLPGGIRYAAEVHERLDVLGVHAGD--GVADGL 488 C +D + ++ GI+Y AE ++ DV+ V D G A GL Sbjct: 132 CEIDNEKVNLIITDGIKYVAETEKKYDVIIVDCPDPVGPAKGL 174
>GABP2_HUMAN (Q06547) GA-binding protein beta chain (GABP-beta-2 subunit)| (GABP-2) (GABP-beta-1 subunit) (GABPB-1) (Transcription factor E4TF1-53) (Transcription factor E4TF1-47) (Nuclear respiratory factor 2) Length = 395 Score = 28.9 bits (63), Expect = 8.3 Identities = 24/87 (27%), Positives = 35/87 (40%) Frame = +3 Query: 174 RVMVLRDGHDKVDATTGRARRQEDHEALVGQVXXXXXXXXPGAEVNLVEPKTQAAVHLQV 353 R V RD KVD T E H ++V + GA+VN + A+H Sbjct: 59 RAGVSRDARTKVDRTPLHMAASEGHASIVEVLLKH------GADVNAKDMLKMTALHWAT 112 Query: 354 RAEHCAVDRRRGRELLPGGIRYAAEVH 434 H +E++ I+Y A+VH Sbjct: 113 EHNH--------QEVVELLIKYGADVH 131
>HERC2_DROME (Q9VR91) HECT domain and RCC1-like domain-containing protein 2| Length = 4912 Score = 28.9 bits (63), Expect = 8.3 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = +1 Query: 49 ICKTQDNRELPDLFTQIMRVLHLGAFYIFELALSSARV*KVAVSWSSGMAMTRS--TPPL 222 +C +QDNR+ P+ ++ + V L F + LAL + V V +SG + S T L Sbjct: 927 MCSSQDNRQTPNQESECIAVACLNLFRLQLLALIANGVEPRQVGLASGSRLLCSLKTRIL 986 Query: 223 AVHDGKKIMR 252 + G +++R Sbjct: 987 GLAGGSQVLR 996
>MRAZ_MOOTA (Q2RK88) Protein mraZ| Length = 143 Score = 28.9 bits (63), Expect = 8.3 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Frame = +3 Query: 321 PKTQAAVHLQVR-----AEHCAVDRRRGRELLPGGIRYAAEVHERLDVLGV 458 P T+A VR A C +DR+ GR LLPG +R A + + + V+GV Sbjct: 59 PFTRADARAFVRFFFSGATECELDRQ-GRILLPGNLREYARLDKEVVVVGV 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,490,508 Number of Sequences: 219361 Number of extensions: 1139936 Number of successful extensions: 3581 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3429 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3579 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
