ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart31a03 |
|---|---|
| Clone Library Name | barley_pub |
>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)| Length = 386 Score = 46.6 bits (109), Expect = 3e-05 Identities = 27/75 (36%), Positives = 44/75 (58%) Frame = -3 Query: 467 SSHQYLRIQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGG 288 S + YLR+Q + L+G+ +DD S+AN+ LV++G++LL + VS + E Sbjct: 312 SQNNYLRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSKDNPE----------- 360 Query: 287 TNAEELAKYARQLSD 243 T E L ++A+ LSD Sbjct: 361 TYEEALKRFAKLLSD 375
>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber| protein) Length = 386 Score = 45.1 bits (105), Expect = 9e-05 Identities = 27/75 (36%), Positives = 43/75 (57%) Frame = -3 Query: 467 SSHQYLRIQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGG 288 S + YLR+Q + L+G+ +DD S+AN++ LV++G+ LL + VS E Sbjct: 312 SQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------- 360 Query: 287 TNAEELAKYARQLSD 243 T E L ++A+ LSD Sbjct: 361 TYEEALKRFAKLLSD 375
>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)| Length = 386 Score = 45.1 bits (105), Expect = 9e-05 Identities = 27/75 (36%), Positives = 43/75 (57%) Frame = -3 Query: 467 SSHQYLRIQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGG 288 S + YLR+Q + L+G+ +DD S+AN++ LV++G+ LL + VS E Sbjct: 312 SQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------- 360 Query: 287 TNAEELAKYARQLSD 243 T E L ++A+ LSD Sbjct: 361 TYEEALKRFAKLLSD 375
>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)| Length = 386 Score = 45.1 bits (105), Expect = 9e-05 Identities = 27/75 (36%), Positives = 43/75 (57%) Frame = -3 Query: 467 SSHQYLRIQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGG 288 S + YLR+Q + L+G+ +DD S+AN++ LV++G+ LL + VS E Sbjct: 312 SQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPE----------- 360 Query: 287 TNAEELAKYARQLSD 243 T E L ++A+ LSD Sbjct: 361 TYEEALKRFAKLLSD 375
>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)| Length = 377 Score = 43.1 bits (100), Expect = 3e-04 Identities = 21/50 (42%), Positives = 34/50 (68%) Frame = -3 Query: 467 SSHQYLRIQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLET 318 S + YLR+Q + L+G+ +DD S+AN++ LV++G+ LL + VS ET Sbjct: 303 SQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSKDSPET 352
>APEA_CLOAB (Q97K30) Probable M18-family aminopeptidase 1 (EC 3.4.11.-)| Length = 465 Score = 33.5 bits (75), Expect = 0.28 Identities = 24/68 (35%), Positives = 37/68 (54%) Frame = -3 Query: 446 IQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELA 267 I ++K +GS G C+ AN + + ++ L E V+ E G+ V+ GGGT A LA Sbjct: 367 IVFNKYTGSRGK-SGCNDANPEYIAELRRILSKESVNWQTAELGK-VDQGGGGTIAYILA 424 Query: 266 KYARQLSD 243 +Y Q+ D Sbjct: 425 EYGMQVID 432
>ARGC1_PSEPK (Q88QQ6) N-acetyl-gamma-glutamyl-phosphate reductase 1 (EC| 1.2.1.38) (AGPR 1) (N-acetyl-glutamate semialdehyde dehydrogenase 1) (NAGSA dehydrogenase 1) Length = 344 Score = 32.7 bits (73), Expect = 0.47 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +3 Query: 237 ALIGELPCVLGELLRVCASTGHLHIP---AGLQVHPGHLLGEKLIPNL 371 A +G L C GE ++ A GH H+P GL++ G +G +P+L Sbjct: 188 AAVGSLFCEAGESMKAYAVKGHRHLPEISQGLRLAAGKDIGLTFVPHL 235
>PTPR2_RAT (Q63475) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (PTP NE-6) (PTPNE6) (Phogrin) Length = 1004 Score = 32.3 bits (72), Expect = 0.62 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +1 Query: 241 SSESCLAYLASSSAFVPPPGT------STFRPVSRSTPDTFSARSSSPI 369 S E+ L Y+A +SA PP T + RP+SR PD S + S I Sbjct: 185 SPENILTYVAHTSALTYPPATRVKYPDNLLRPLSRLQPDELSPKVDSDI 233
>PPDK_TREPA (O83728) Pyruvate, phosphate dikinase (EC 2.7.9.1) (Pyruvate,| orthophosphate dikinase) Length = 901 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 Query: 353 LAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLS 246 LA K VD + G +E+P +A+E+A+YA+ S Sbjct: 734 LALKAKEVDYKVGAMIELPAAALSADEIARYAQFFS 769
>GPMA_RALEJ (Q476J7) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 248 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/57 (26%), Positives = 31/57 (54%) Frame = -3 Query: 410 IDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 240 + +C K + R++ + +E +A D+++G+ V + G + L KY Q+SD+ Sbjct: 148 LTECLKDTVARVLPLWNESIAP-----DIQSGKRVVIAAHGNSIRALVKYLDQISDD 199
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = +1 Query: 241 SSESCLAYLASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLALEQS 405 SS S + +SSS+F+ +STF TP + S+ +SS + ++ + LAL S Sbjct: 226 SSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSSEVPSSTAALALNAS 280
>CLPB_STAAS (Q6GAV1) Chaperone clpB| Length = 869 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/69 (34%), Positives = 37/69 (53%) Frame = -3 Query: 446 IQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELA 267 I + + SA ID +K ++ V++ E++ +KV G + T +N EV N E LA Sbjct: 108 ISMEHILRSAMDIDQTTKHYINNKVEVIKEII-KKVRGGNHVTSQNPEV-----NYEALA 161 Query: 266 KYARQLSDE 240 KY R L +E Sbjct: 162 KYGRDLVEE 170
>CLPB_STAAR (Q6GIB2) Chaperone clpB| Length = 869 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/69 (34%), Positives = 37/69 (53%) Frame = -3 Query: 446 IQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELA 267 I + + SA ID +K ++ V++ E++ +KV G + T +N EV N E LA Sbjct: 108 ISMEHILRSAMDIDQTTKHYINNKVEVIKEII-KKVRGGNHVTSQNPEV-----NYEALA 161 Query: 266 KYARQLSDE 240 KY R L +E Sbjct: 162 KYGRDLVEE 170
>CLPB_STAAN (Q7A6G6) Chaperone clpB| Length = 869 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/69 (34%), Positives = 37/69 (53%) Frame = -3 Query: 446 IQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELA 267 I + + SA ID +K ++ V++ E++ +KV G + T +N EV N E LA Sbjct: 108 ISMEHILRSAMDIDQTTKHYINNKVEVIKEII-KKVRGGNHVTSQNPEV-----NYEALA 161 Query: 266 KYARQLSDE 240 KY R L +E Sbjct: 162 KYGRDLVEE 170
>CLPB_STAAM (Q99VB5) Chaperone clpB| Length = 869 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/69 (34%), Positives = 37/69 (53%) Frame = -3 Query: 446 IQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELA 267 I + + SA ID +K ++ V++ E++ +KV G + T +N EV N E LA Sbjct: 108 ISMEHILRSAMDIDQTTKHYINNKVEVIKEII-KKVRGGNHVTSQNPEV-----NYEALA 161 Query: 266 KYARQLSDE 240 KY R L +E Sbjct: 162 KYGRDLVEE 170
>CLPB_STAAC (Q5HHB0) Chaperone clpB| Length = 869 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/69 (34%), Positives = 37/69 (53%) Frame = -3 Query: 446 IQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELA 267 I + + SA ID +K ++ V++ E++ +KV G + T +N EV N E LA Sbjct: 108 ISMEHILRSAMDIDQTTKHYINNKVEVIKEII-KKVRGGNHVTSQNPEV-----NYEALA 161 Query: 266 KYARQLSDE 240 KY R L +E Sbjct: 162 KYGRDLVEE 170
>SYFA_PSEAE (Q9I0A3) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +3 Query: 249 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLGA 401 ++ CV+ G RVC TG L + VHP L + P Q G+GA Sbjct: 258 DIQCVICSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSNIDPEKFQGFAFGMGA 310
>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein tyrosine phosphatase-NP) (PTP-NP) Length = 1001 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = +1 Query: 241 SSESCLAYLASSSAFVPPPGT------STFRPVSRSTPDTFSARSSSPI 369 S E+ L Y+A +SA PP T + RP SR PD S + I Sbjct: 185 SPENILTYVAHTSALTYPPATRAKYPDNLLRPFSRLQPDELSPKVDGDI 233
>GPMA2_LACPL (Q88T35) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| 2 (EC 5.4.2.1) (Phosphoglyceromutase 2) (PGAM 2) (BPG-dependent PGAM 2) (dPGM 2) Length = 230 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = -3 Query: 395 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 240 K L+R++ ++ +A K L G+NV + G + L+KY Q+SD+ Sbjct: 153 KVTLERVMPFWEDQIAPK-----LLDGKNVIIAAHGNSLRALSKYIEQISDD 199
>FDHD_NOCFA (Q5Z057) Protein fdhD homolog| Length = 279 Score = 30.0 bits (66), Expect = 3.1 Identities = 23/74 (31%), Positives = 34/74 (45%) Frame = +3 Query: 222 VTASAALIGELPCVLGELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLGA 401 VT +A ++ +LP L V +TG LH AGL G L + H + +G Sbjct: 136 VTLAADVLADLPATLRAGQSVFQATGGLH-AAGLFTVDGTPLAVREDIGRHNAVDKVIGW 194 Query: 402 VVDEARTPAQFIIL 443 + E R PA ++L Sbjct: 195 ALRENRVPAHELVL 208
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 8/54 (14%) Frame = +1 Query: 295 PGTSTFRPVSRSTPDTFSARSSSPI--------FTNLSKLALEQSSMKPALPLS 432 PGT+T P RST T +A S +PI +T LS+ ++M A P S Sbjct: 2488 PGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSS 2541
>SYFA_PSEF5 (Q4KEW0) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +3 Query: 249 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLGA 401 ++ CV+ G+ RVC TG L + VHP L + P Q G+GA Sbjct: 258 DMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMGA 310
>CLPB_STAAW (Q8NXE7) Chaperone clpB| Length = 869 Score = 29.6 bits (65), Expect = 4.0 Identities = 23/69 (33%), Positives = 37/69 (53%) Frame = -3 Query: 446 IQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELA 267 I + + SA ID +K ++ V++ E++ +KV G + T +N EV N + LA Sbjct: 108 ISMEHILRSAMDIDQTTKHYINNKVEVIKEII-KKVRGGNHVTSQNPEV-----NYKALA 161 Query: 266 KYARQLSDE 240 KY R L +E Sbjct: 162 KYGRDLVEE 170
>SYFA_PSEPK (Q88K23) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +3 Query: 249 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLGA 401 ++ CV+ G RVC TG L + VHP L + P Q G+GA Sbjct: 258 DIQCVMCSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMGA 310
>THSB_DESMO (Q9V2T3) Thermosome subunit beta (Thermosome subunit 2) (Chaperonin| beta subunit) (Fragment) Length = 502 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -3 Query: 395 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLS 246 + L+RLV + + + +S V +PGGG ELAK+ R+L+ Sbjct: 361 RGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLA 410
>ARGC_PSEAE (Q9I5Q9) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 344 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +3 Query: 237 ALIGELPCVLGELLRVCASTGHLHIP---AGLQVHPGHLLGEKLIPNL 371 A +G L C GE + A GH H+P GL+ G +G +P+L Sbjct: 188 AKVGSLFCEAGESMMAYAVKGHRHLPEISQGLRRASGGDVGLTFVPHL 235
>POLG_EBHSG (Q96725) Genome polyprotein [Contains: p16; p23; Helicase (2C-like| protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, subgenomic Length = 2334 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +1 Query: 262 YLASSSAFVPPPGTSTFRPVSRSTPDTFSA 351 Y SA V PGT P+ ++TP FSA Sbjct: 2190 YTPQPSAIVTTPGTPVAAPIGKNTPIMFSA 2219
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +1 Query: 268 ASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLALEQSSMKPAL 423 + SS P PG STF V S ++SP+ + + + S KP L Sbjct: 506 SDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTL 557
>FPRP_HUMAN (Q9P2B2) Prostaglandin F2 receptor negative regulator precursor| (Prostaglandin F2-alpha receptor regulatory protein) (Prostaglandin F2-alpha receptor-associated protein) (CD9 partner 1) (CD9P-1) (CD315 antigen) Length = 879 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Frame = -2 Query: 180 LMYVFKLILTFGLGAQSV-----CLI*LCRAYCCCNSLVQES 70 ++ FK L G+G +V CLI C ++ CC VQE+ Sbjct: 825 VLNAFKYPLLIGVGLSTVIGLLSCLIGYCSSHWCCKKEVQET 866
>CYSE_SYNP7 (Q56002) Serine acetyltransferase (EC 2.3.1.30) (SAT)| Length = 244 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +3 Query: 318 GLQVHPGHLLGEKLIPNLHQPIQVGLGAVVDEARTPAQFIILDAEVLMGG 467 G+++HPG LG+ + I G+G V+ E + ++ V +GG Sbjct: 65 GVEIHPGARLGQGIF------IDHGMGVVIGETAIVGDYCLIYQGVTLGG 108
>GPMA2_LACSS (Q38Z74) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| 2 (EC 5.4.2.1) (Phosphoglyceromutase 2) (PGAM 2) (BPG-dependent PGAM 2) (dPGM 2) Length = 229 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -3 Query: 395 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 240 K L+R++ ++ +A K L G+N+ V G + L KY +SDE Sbjct: 153 KVTLERVIPFWEDEIAPK-----LIDGQNIIVAAHGNSLRALTKYIENISDE 199
>AMPA_BUCAI (P57448) Cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 499 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -3 Query: 443 QYDKLSGSAGFIDDCSKANLDRLVKIGD 360 + +LS SA ++D CS ++ L+K+GD Sbjct: 24 ELSELSDSAIYLDKCSNGHITSLIKLGD 51
>KPYK_MYCTU (O06134) Pyruvate kinase (EC 2.7.1.40) (PK)| Length = 472 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/67 (25%), Positives = 32/67 (47%) Frame = -3 Query: 464 SHQYLRIQYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGT 285 S Y R+ D ++G +DD A + V+ GD+++ V G + + + +PG Sbjct: 106 STTYKRLAQDAVAGDRVLVDDGKVALVVDAVE-GDDVVCTVVEGGPVSDNKGISLPGMNV 164 Query: 284 NAEELAK 264 A L++ Sbjct: 165 TAPALSE 171
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 28.5 bits (62), Expect = 8.9 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +1 Query: 241 SSESCLAYLASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLS-KLALEQSSMKP 417 S+ ++ +ASSS VP P T T P S +T + S +SSP +S +L + P Sbjct: 441 SNGPSVSSVASSS--VPSPATPTLTPTSTATSMSTSVPTSSPAPPAMSPHHSLNSAGPSP 498 Query: 418 ALPLS 432 +P S Sbjct: 499 GMPNS 503
>Y2306_MYCBO (P67207) Hypothetical UPF0089 protein Mb2306| Length = 445 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 271 SSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLALEQSSMKPALPLSL 435 ++S FV P GTS PV+R T + S +S AL+ S+ LP+++ Sbjct: 296 AASGFVAPLGTSIEDPVARLTTISASTTRGKAELLAMSPNALQHYSVFGLLPIAV 350
>Y2285_MYCTU (P67206) Hypothetical UPF0089 protein Rv2285/MT2343| Length = 445 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 271 SSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLALEQSSMKPALPLSL 435 ++S FV P GTS PV+R T + S +S AL+ S+ LP+++ Sbjct: 296 AASGFVAPLGTSIEDPVARLTTISASTTRGKAELLAMSPNALQHYSVFGLLPIAV 350
>UBL7_MOUSE (Q91W67) Ubiquitin-like protein 7 (Ubiquitin-like protein SB132)| Length = 380 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = +1 Query: 256 LAYLASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLALEQSSMKPALPLSL 435 LA SS+ P PGT S ++P + +S +PI +L AL+ + P Sbjct: 278 LASTPESSSHTPTPGTQGHS--SGTSPMSSGVQSGTPITNDLFSQALQHALQASGQPSLQ 335 Query: 436 SYW 444 S W Sbjct: 336 SQW 338
>UBL7_HUMAN (Q96S82) Ubiquitin-like protein 7 (Ubiquitin-like protein SB132)| (Bone marrow stromal cell ubiquitin-like protein) (BMSC-UbP) Length = 380 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = +1 Query: 256 LAYLASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLALEQSSMKPALPLSL 435 LA SS+ P PGT S ++P + +S +PI +L AL+ + P Sbjct: 278 LASTPESSSHTPTPGTQGHS--SGTSPMSSGVQSGTPITNDLFSQALQHALQASGQPSLQ 335 Query: 436 SYW 444 S W Sbjct: 336 SQW 338
>GPMA_CHLCH (Q3AU60) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 247 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/68 (25%), Positives = 32/68 (47%) Frame = -3 Query: 443 QYDKLSGSAGFIDDCSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAK 264 +Y LS + + +C K + R + + E +A ++ GRNV + G + L K Sbjct: 137 RYASLSEAEVPLTECLKDTVARFLPLWHETIAPEI-----RKGRNVIIAAHGNSIRALVK 191 Query: 263 YARQLSDE 240 Y +S++ Sbjct: 192 YLDNVSED 199
>CD45_HUMAN (P08575) Leukocyte common antigen precursor (EC 3.1.3.48) (L-CA)| (CD45 antigen) (T200) Length = 1304 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = +1 Query: 268 ASSSAFVPPPGTSTFR--PVSRSTPDTFSARSSSPIFTNLSKLALEQSSMKPA 420 A+++ P PG++ P RST TF SP+ T LS LA S+ PA Sbjct: 129 AANAKLNPTPGSNAISDVPGERSTASTFPTDPVSPLTTTLS-LAHHSSAALPA 180 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,071,447 Number of Sequences: 219361 Number of extensions: 1237102 Number of successful extensions: 4423 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4200 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4416 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
