ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRN... 210 3e-51
2gb|AY103674.1| Zea mays PCO104001 mRNA sequence 210 3e-51
3ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA 206 5e-50
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 206 5e-50
5dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 206 5e-50
6dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 5e-50
7gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-... 204 2e-49
8ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA 139 9e-30
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 139 9e-30
10gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genom... 139 9e-30
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 139 9e-30
12dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
13dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 9e-30
14gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, com... 94 5e-16
15gb|AY105798.1| Zea mays PCO089449 mRNA sequence 92 2e-15
16emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribos... 86 1e-13
17ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural consti... 66 1e-07
18gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like prote... 66 1e-07
19emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, B... 66 1e-07
20gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 66 1e-07
21gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 66 1e-07
22gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, c... 66 1e-07
23emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
24emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
25emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
26emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
27gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, ... 60 7e-06
28emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
29emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
30emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal pr... 58 3e-05
31emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal ... 58 3e-05
32gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clon... 56 1e-04
33dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
34gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence 50 0.006
35gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence 48 0.025
36gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete se... 46 0.098
37gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-3... 46 0.098
38gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA 46 0.098
39gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, com... 44 0.39
40gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, com... 44 0.39
41gb|AC010985.8| Homo sapiens BAC clone RP11-521O14 from 2, comple... 44 0.39
42gb|AE007306.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 42 1.5
43gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.5
44gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, comple... 42 1.5
45gb|AC124553.4| Mus musculus BAC clone RP23-223I5 from 1, complet... 42 1.5
46dbj|D29796.1|XELXCFB Xenopus laevis mRNA for complement factor B 42 1.5
47dbj|D49373.1|XELBFB Xenopus laevis mRNA for Bf B (complement fac... 42 1.5
48gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 6.1
49gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete... 40 6.1
50gb|AY485613.1| Pichia guilliermondii DNA-dependent RNA polymeras... 40 6.1
51ref|XR_003042.1| PREDICTED: Mus musculus similar to putative phe... 40 6.1
52ref|XM_913431.2| PREDICTED: Mus musculus similar to putative phe... 40 6.1
53ref|XM_892444.2| PREDICTED: Mus musculus similar to putative phe... 40 6.1
54emb|CR382284.13| Zebrafish DNA sequence from clone DKEY-95H16 in... 40 6.1
55gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosom... 40 6.1
56gb|AY223014.1| Schistosoma japonicum clone ZZD1110 mRNA sequence 40 6.1
57gb|AC104843.3| Homo sapiens BAC clone RP11-1246H4 from 7, comple... 40 6.1
58emb|AL359538.8| Human DNA sequence from clone RP11-556N21 on chr... 40 6.1
59emb|AL034379.8|HS423B22 Human DNA sequence from clone RP3-423B22... 40 6.1
60emb|AL646091.4| Mouse DNA sequence from clone RP23-101K9 on chro... 40 6.1
61gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, com... 40 6.1
62gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, com... 40 6.1
63gb|AC008413.7| Homo sapiens chromosome 5 clone CTC-281M20, compl... 40 6.1
64gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 1... 40 6.1
65gb|AC139768.14| Homo sapiens 12 BAC RP11-454E5 (Roswell Park Can... 40 6.1
66gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, comp... 40 6.1
67dbj|BS000088.1| Pan troglodytes chromosome 22 clone:RP43-078B15,... 40 6.1
68emb|BX784025.12| Zebrafish DNA sequence from clone DKEY-72L14 in... 40 6.1
69gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 ... 40 6.1
70dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.1
71dbj|D37942.1|WHTPH2B6A Triticum aestivum mRNA for protein H2B-6,... 40 6.1
72gb|AC130722.3| Mus musculus BAC clone RP24-358L24 from 3, comple... 40 6.1
73gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complet... 40 6.1
74gb|AC154369.1| Mus musculus BAC clone RP24-572H8 from 17, comple... 40 6.1
75gb|AC004369.1|AC004369 Drosophila melanogaster DNA sequence (P1 ... 40 6.1
76gb|AC169811.2| Rhesus Macaque CHR7 BAC CH250-119C16 (Children's ... 40 6.1
77dbj|AP000961.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 6.1 
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds
          Length = 1023

 Score =  210 bits (106), Expect = 3e-51
 Identities = 166/186 (89%)
 Strand = Plus / Minus

                                                                       
Query: 266 ggcagcaggagcctttgtagcagcagacagctttgacctcctcttggccatgctctcact 325
           |||||||| |||||| |  || ||||| ||||| |||||||||||||||| |||||||||
Sbjct: 812 ggcagcagaagccttggcggcggcagaaagcttagacctcctcttggccaagctctcact 753

                                                                       
Query: 326 gcggcggtctctctgctccttcagcctttgcgcaagcagcttctggtactctgcagcctc 385
           ||||||||| ||||| || |||||||| || ||||| |||||||||||||| ||||||||
Sbjct: 752 gcggcggtccctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctc 693

                                                                       
Query: 386 tgacttcttcttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggag 445
            ||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 692 agacttcttcttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggag 633

                 
Query: 446 ggtcaa 451
           ||||||
Sbjct: 632 ggtcaa 627
to top
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence
          Length = 1198

 Score =  210 bits (106), Expect = 3e-51
 Identities = 166/186 (89%)
 Strand = Plus / Minus

                                                                       
Query: 266 ggcagcaggagcctttgtagcagcagacagctttgacctcctcttggccatgctctcact 325
           |||||||| |||||| |  || ||||| ||||| |||||||||||||||| |||||||||
Sbjct: 940 ggcagcagaagccttggcggcggcagaaagcttagacctcctcttggccaagctctcact 881

                                                                       
Query: 326 gcggcggtctctctgctccttcagcctttgcgcaagcagcttctggtactctgcagcctc 385
           ||||||||| ||||| || |||||||| || ||||| |||||||||||||| ||||||||
Sbjct: 880 gcggcggtccctctgttctttcagcctctgggcaagaagcttctggtactcagcagcctc 821

                                                                       
Query: 386 tgacttcttcttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggag 445
            ||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 820 agacttcttcttagcgatcctcttcttcttgtcagcaattctagcacgcttcctctggag 761

                 
Query: 446 ggtcaa 451
           ||||||
Sbjct: 760 ggtcaa 755
to top
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1077

 Score =  206 bits (104), Expect = 5e-50
 Identities = 161/180 (89%)
 Strand = Plus / Minus

                                                                       
Query: 269 agcaggagcctttgtagcagcagacagctttgacctcctcttggccatgctctcactgcg 328
           ||||| |||||| | ||||| ||| ||||| ||||||||||| |||| |||||| || ||
Sbjct: 832 agcagcagccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccg 773

                                                                       
Query: 329 gcggtctctctgctccttcagcctttgcgcaagcagcttctggtactctgcagcctctga 388
           ||| || ||||||||||| ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct: 772 gcgttccctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccga 713

                                                                       
Query: 389 cttcttcttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggt 448
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 712 cttcttcttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggt 653
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  206 bits (104), Expect = 5e-50
 Identities = 161/180 (89%)
 Strand = Plus / Minus

                                                                            
Query: 269      agcaggagcctttgtagcagcagacagctttgacctcctcttggccatgctctcactgcg 328
                ||||| |||||| | ||||| ||| ||||| ||||||||||| |||| |||||| || ||
Sbjct: 25671577 agcagcagccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccg 25671518

                                                                            
Query: 329      gcggtctctctgctccttcagcctttgcgcaagcagcttctggtactctgcagcctctga 388
                ||| || ||||||||||| ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct: 25671517 gcgttccctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccga 25671458

                                                                            
Query: 389      cttcttcttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggt 448
                |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 25671457 cttcttcttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggt 25671398
to top
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0594D10
          Length = 143200

 Score =  206 bits (104), Expect = 5e-50
 Identities = 161/180 (89%)
 Strand = Plus / Minus

                                                                          
Query: 269    agcaggagcctttgtagcagcagacagctttgacctcctcttggccatgctctcactgcg 328
              ||||| |||||| | ||||| ||| ||||| ||||||||||| |||| |||||| || ||
Sbjct: 125550 agcagcagccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccg 125491

                                                                          
Query: 329    gcggtctctctgctccttcagcctttgcgcaagcagcttctggtactctgcagcctctga 388
              ||| || ||||||||||| ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct: 125490 gcgttccctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccga 125431

                                                                          
Query: 389    cttcttcttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggt 448
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 125430 cttcttcttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggt 125371
to top
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full
           insert sequence
          Length = 1078

 Score =  206 bits (104), Expect = 5e-50
 Identities = 161/180 (89%)
 Strand = Plus / Minus

                                                                       
Query: 269 agcaggagcctttgtagcagcagacagctttgacctcctcttggccatgctctcactgcg 328
           ||||| |||||| | ||||| ||| ||||| ||||||||||| |||| |||||| || ||
Sbjct: 833 agcagcagccttggcagcagaagaaagcttggacctcctctttgccaagctctcgctccg 774

                                                                       
Query: 329 gcggtctctctgctccttcagcctttgcgcaagcagcttctggtactctgcagcctctga 388
           ||| || ||||||||||| ||||| || ||||| |||||||||||||| |||||||| ||
Sbjct: 773 gcgttccctctgctccttgagcctctgggcaagaagcttctggtactcagcagcctccga 714

                                                                       
Query: 389 cttcttcttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggt 448
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 713 cttcttcttggcgatcctcttcttcttgtcagcgattctggcacgcttcctctggagggt 654
to top
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds
          Length = 1039

 Score =  204 bits (103), Expect = 2e-49
 Identities = 180/205 (87%), Gaps = 3/205 (1%)
 Strand = Plus / Minus

                                                                       
Query: 250 aacaatcttaagcagagg---cagcaggagcctttgtagcagcagacagctttgacctcc 306
           |||| |||||||||||||   |||||| |||||| |  || ||||| ||||| |||||||
Sbjct: 832 aacattcttaagcagaggtggcagcagaagccttggcggcggcagaaagcttggacctcc 773

                                                                       
Query: 307 tcttggccatgctctcactgcggcggtctctctgctccttcagcctttgcgcaagcagct 366
           ||||||||| |||||| || |||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 772 tcttggccaagctctcgctccggcggtctctctgttccttcagcctctgggcaagaagct 713

                                                                       
Query: 367 tctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggcgattc 426
           |||||||||| |||||||| ||||||||||| |  ||||||||||||||||| |||||||
Sbjct: 712 tctggtactcagcagcctcagacttcttcttagttatcctcttcttcttgtcagcgattc 653

                                    
Query: 427 tggcacgcttcctctggagggtcaa 451
           | |||||||||||||||||||||||
Sbjct: 652 tagcacgcttcctctggagggtcaa 628
to top
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 983

 Score =  139 bits (70), Expect = 9e-30
 Identities = 136/158 (86%)
 Strand = Plus / Minus

                                                                       
Query: 285 gcagcagacagctttgacctcctcttggccatgctctcactgcggcggtctctctgctcc 344
           |||||||| ||||| ||||||||||| |||| ||||||||| | ||| || |||||||||
Sbjct: 766 gcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctctgctcc 707

                                                                       
Query: 345 ttcagcctttgcgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 404
           || ||||| || |||||||||||||||||||| |||||||| |||||||||||||| || 
Sbjct: 706 ttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttggcaatt 647

                                                 
Query: 405 ctcttcttcttgtcggcgattctggcacgcttcctctg 442
           || | |||||| | ||||||||| || | |||||||||
Sbjct: 646 ctttgcttcttctgggcgattctcgccctcttcctctg 609
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 9e-30
 Identities = 136/158 (86%)
 Strand = Plus / Plus

                                                                            
Query: 285      gcagcagacagctttgacctcctcttggccatgctctcactgcggcggtctctctgctcc 344
                |||||||| ||||| ||||||||||| |||| ||||||||| | ||| || |||||||||
Sbjct: 15460642 gcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctctgctcc 15460701

                                                                            
Query: 345      ttcagcctttgcgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 404
                || ||||| || |||||||||||||||||||| |||||||| |||||||||||||| || 
Sbjct: 15460702 ttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttggcaatt 15460761

                                                      
Query: 405      ctcttcttcttgtcggcgattctggcacgcttcctctg 442
                || | |||||| | ||||||||| || | |||||||||
Sbjct: 15460762 ctttgcttcttctgggcgattctcgccctcttcctctg 15460799
to top
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
             sequence
          Length = 164705

 Score =  139 bits (70), Expect = 9e-30
 Identities = 136/158 (86%)
 Strand = Plus / Minus

                                                                         
Query: 285   gcagcagacagctttgacctcctcttggccatgctctcactgcggcggtctctctgctcc 344
             |||||||| ||||| ||||||||||| |||| ||||||||| | ||| || |||||||||
Sbjct: 40884 gcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctctgctcc 40825

                                                                         
Query: 345   ttcagcctttgcgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 404
             || ||||| || |||||||||||||||||||| |||||||| |||||||||||||| || 
Sbjct: 40824 ttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttggcaatt 40765

                                                   
Query: 405   ctcttcttcttgtcggcgattctggcacgcttcctctg 442
             || | |||||| | ||||||||| || | |||||||||
Sbjct: 40764 ctttgcttcttctgggcgattctcgccctcttcctctg 40727
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 9e-30
 Identities = 136/158 (86%)
 Strand = Plus / Plus

                                                                            
Query: 285      gcagcagacagctttgacctcctcttggccatgctctcactgcggcggtctctctgctcc 344
                |||||||| ||||| ||||||||||| |||| ||||||||| | ||| || |||||||||
Sbjct: 15455176 gcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctctgctcc 15455235

                                                                            
Query: 345      ttcagcctttgcgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 404
                || ||||| || |||||||||||||||||||| |||||||| |||||||||||||| || 
Sbjct: 15455236 ttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttggcaatt 15455295

                                                      
Query: 405      ctcttcttcttgtcggcgattctggcacgcttcctctg 442
                || | |||||| | ||||||||| || | |||||||||
Sbjct: 15455296 ctttgcttcttctgggcgattctcgccctcttcctctg 15455333
to top
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full
           insert sequence
          Length = 1018

 Score =  139 bits (70), Expect = 9e-30
 Identities = 136/158 (86%)
 Strand = Plus / Minus

                                                                       
Query: 285 gcagcagacagctttgacctcctcttggccatgctctcactgcggcggtctctctgctcc 344
           |||||||| ||||| ||||||||||| |||| ||||||||| | ||| || |||||||||
Sbjct: 764 gcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctctgctcc 705

                                                                       
Query: 345 ttcagcctttgcgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 404
           || ||||| || |||||||||||||||||||| |||||||| |||||||||||||| || 
Sbjct: 704 ttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttggcaatt 645

                                                 
Query: 405 ctcttcttcttgtcggcgattctggcacgcttcctctg 442
           || | |||||| | ||||||||| || | |||||||||
Sbjct: 644 ctttgcttcttctgggcgattctcgccctcttcctctg 607
to top
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full
           insert sequence
          Length = 990

 Score =  139 bits (70), Expect = 9e-30
 Identities = 136/158 (86%)
 Strand = Plus / Minus

                                                                       
Query: 285 gcagcagacagctttgacctcctcttggccatgctctcactgcggcggtctctctgctcc 344
           |||||||| ||||| ||||||||||| |||| ||||||||| | ||| || |||||||||
Sbjct: 763 gcagcagaaagcttggacctcctctttgccaagctctcactcctgcgttccctctgctcc 704

                                                                       
Query: 345 ttcagcctttgcgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 404
           || ||||| || |||||||||||||||||||| |||||||| |||||||||||||| || 
Sbjct: 703 ttgagcctctgggcaagcagcttctggtactcggcagcctcggacttcttcttggcaatt 644

                                                 
Query: 405 ctcttcttcttgtcggcgattctggcacgcttcctctg 442
           || | |||||| | ||||||||| || | |||||||||
Sbjct: 643 ctttgcttcttctgggcgattctcgccctcttcctctg 606
to top
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds
          Length = 1020

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                       
Query: 294 agctttgacctcctcttggccatgctctcactgcggcggtctctctgctccttcagcctt 353
           ||||| || |||||||| ||||  ||||||||||||||||||||||||||||||| ||| 
Sbjct: 778 agcttggatctcctcttagccaaactctcactgcggcggtctctctgctccttcaacctg 719

                                                                       
Query: 354 tgcgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttc 413
              ||||| || |||||||||||||| ||||| || ||   |||||| ||||||||||||
Sbjct: 718 gaggcaaggagtttctggtactctgctgcctcagattttgccttggcaatcctcttcttc 659

                                  
Query: 414 ttgtcggcgattctggcacgctt 436
           || || || ||||| || |||||
Sbjct: 658 ttatcagcaattcttgcccgctt 636
to top
>gb|AY105798.1| Zea mays PCO089449 mRNA sequence
          Length = 777

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 78/88 (88%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 329 gcggtctctctgctccttcagcctttgcgcaagcagcttctggtactctgcagcctctga 388
           |||||||||||| ||||||||||| || ||||| ||||| |||||||| |||||||| ||
Sbjct: 732 gcggtctctctgttccttcagcctctgagcaagaagcttttggtactcggcagcctcaga 673

                                       
Query: 389 cttcttcttggcgatcctcttcttcttg 416
              |||||||||||||||||||||||||
Sbjct: 672 ---cttcttggcgatcctcttcttcttg 648
to top
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene)
          Length = 959

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 127/155 (81%)
 Strand = Plus / Minus

                                                                       
Query: 285 gcagcagacagctttgacctcctcttggccatgctctcactgcggcggtctctctgctcc 344
           |||||||| ||| | |||||| |||| |||| |||||||||||| ||||| |||||||||
Sbjct: 750 gcagcagagagcctggacctcttctttgccaagctctcactgcgtcggtccctctgctcc 691

                                                                       
Query: 345 ttcagcctttgcgcaagcagcttctggtactctgcagcctctgacttcttcttggcgatc 404
           || |||||    ||||| ||||||||||| |||||||| || || ||   |||||| |  
Sbjct: 690 ttgagcctcgaggcaaggagcttctggtattctgcagcttcagatttggccttggcaact 631

                                              
Query: 405 ctcttcttcttgtcggcgattctggcacgcttcct 439
           ||||||||||| || || |||||||| ||||||||
Sbjct: 630 ctcttcttcttctctgcaattctggctcgcttcct 596
to top
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome
           AT5G10360 (EMB3010) mRNA, complete cds
          Length = 1095

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 700 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
to top
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete
           cds
          Length = 1032

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 363 agcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggcg 422
           |||||||| || || ||||| ||||||||   |||||| || ||||||||||||||||| 
Sbjct: 698 agcttctgataatcagcagcttctgacttagccttggcaattctcttcttcttgtcggca 639

                                        
Query: 423 attctggcacgcttcctctggagggtcaa 451
           ||||| || | |||||||||||| |||||
Sbjct: 638 attcttgctctcttcctctggagagtcaa 610
to top
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
          Length = 113053

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                       
Query: 395    cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
              ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 105992 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 105936
to top
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 750

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 615 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 559
to top
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 993

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 700 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
to top
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds
          Length = 993

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 700 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 644
to top
>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 689

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 361 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 305
to top
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 969

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 683 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 627
to top
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZB07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 981

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 681 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 625
to top
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS15ZE05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 947

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||| |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 681 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 625
to top
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds
          Length = 980

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 402 atcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           ||||||||||||||||| |||||||| || | ||||||||| ||||||||
Sbjct: 665 atcctcttcttcttgtcagcgattctagctctcttcctctgaagggtcaa 616
to top
>emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH75ZG03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 645

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggt 448
           ||||||||| |||||||||||||| || ||||| || | |||||||||||||||
Sbjct: 351 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggt 298
to top
>emb|BX831797.1|CNS0A23Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH2ZH10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 692

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggt 448
           ||||||||| |||||||||||||| || ||||| || | |||||||||||||||
Sbjct: 363 cttggcgattctcttcttcttgtcagcaattctagctctcttcctctggagggt 310
to top
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6
          Length = 957

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           |||||| || |||||||||||||| || ||||| || | ||||||||||||||||||
Sbjct: 615 cttggctattctcttcttcttgtcagcaattctagctctcttcctctggagggtcaa 559
to top
>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial
          Length = 920

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 116/145 (80%)
 Strand = Plus / Minus

                                                                       
Query: 307 tcttggccatgctctcactgcggcggtctctctgctccttcagcctttgcgcaagcagct 366
           |||| |||| ||||||||| ||||| || |||||||||||||  ||    ||||| || |
Sbjct: 593 tctttgccaagctctcacttcggcgttccctctgctccttcaatctggatgcaaggagtt 534

                                                                       
Query: 367 tctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcggcgattc 426
           | || |||||||| |||||||| ||   |||||| || ||||||||||| || || ||||
Sbjct: 533 tttgatactctgctgcctctgattttgccttggcaattctcttcttcttatctgcaattc 474

                                    
Query: 427 tggcacgcttcctctggagggtcaa 451
           | || |||||||| ||||| |||||
Sbjct: 473 ttgctcgcttcctttggagtgtcaa 449
to top
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete
             sequence
          Length = 106476

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                         
Query: 300   gacctcctcttggccatgctctcactgcggcggtctctctgctccttcagcctttgcgca 359
             |||||| |||||||||  |||||||| ||||| || | ||||||||| |||||    || 
Sbjct: 89251 gacctcttcttggccaaactctcactacggcgatcacgctgctccttaagcctggaggcg 89310

                                                                         
Query: 360   agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 419
             || |||||||||||||| || || || |  ||   ||| || ||||||||||||||||||
Sbjct: 89311 agaagcttctggtactcagccgcatcagcgttagccttagcaatcctcttcttcttgtcg 89370

                                             
Query: 420   gcgattctggcacgcttcctctggagggtcaa 451
             || ||||| || | ||||||||| || |||||
Sbjct: 89371 gcaattctagctctcttcctctgaagagtcaa 89402
to top
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full
           insert sequence
          Length = 1049

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 338 ctgctccttcagcctttgcgcaagcagcttctggtactctgcagcctctg 387
           ||||||||||||||| ||  | |||||||| ||||||||||| |||||||
Sbjct: 731 ctgctccttcagcctctggacgagcagcttgtggtactctgctgcctctg 682
to top
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence
          Length = 1065

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 395 cttggcgatcctcttcttcttgtcggcgattctggcacgcttcctctggagggtcaa 451
           |||||| || |||||||||||||| |||||||| || | ||||||||| || |||||
Sbjct: 686 cttggcaattctcttcttcttgtcagcgattcttgctctcttcctctgaagagtcaa 630
to top
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence
          Length = 1067

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 102/128 (79%)
 Strand = Plus / Minus

                                                                       
Query: 300 gacctcctcttggccatgctctcactgcggcggtctctctgctccttcagcctttgcgca 359
           |||||| |||| ||||  |||||||| || || ||||| || ||||||| |||    |||
Sbjct: 773 gacctcttcttagccaaactctcactacgtcgttctctttgttccttcaacctactagca 714

                                                                       
Query: 360 agcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttgtcg 419
           || |||||||| || || || |||||||||||   |||||| || |||||||||||||| 
Sbjct: 713 agaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttgtca 654

                   
Query: 420 gcgattct 427
           || |||||
Sbjct: 653 gcaattct 646
to top
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence
          Length = 137979

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 318    ctctcactgcggcggtctctctgctccttca 348
              |||||||||||||| || |||||||||||||
Sbjct: 134320 ctctcactgcggcgttccctctgctccttca 134350
to top
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete
             sequence
          Length = 96221

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 318   ctctcactgcggcggtctctctgctccttca 348
             |||||||||||||| || |||||||||||||
Sbjct: 95233 ctctcactgcggcgttccctctgctccttca 95203
to top
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA
          Length = 1056

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 357 gcaagcagcttctggtactctgcagcctctgacttcttcttggcgatcctcttcttcttg 416
           ||||| |||||||| || || || |||||||||||   |||||| || ||||||||||||
Sbjct: 700 gcaagaagcttctgataatcagctgcctctgacttagccttggcaattctcttcttcttg 641

                      
Query: 417 tcggcgattct 427
           || || |||||
Sbjct: 640 tcagcaattct 630
to top
>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence
          Length = 205646

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 11     actggtggctcacacctctact 32
              ||||||||||||||||||||||
Sbjct: 152853 actggtggctcacacctctact 152832
to top
>gb|AC158955.2| Mus musculus chromosome 15, clone RP23-22C17, complete sequence
          Length = 256999

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 11    actggtggctcacacctctact 32
             ||||||||||||||||||||||
Sbjct: 91951 actggtggctcacacctctact 91930
to top
>gb|AC010985.8| Homo sapiens BAC clone RP11-521O14 from 2, complete sequence
          Length = 196020

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 38    agaaaccaacatagaactctaa 59
             ||||||||||||||||||||||
Sbjct: 19246 agaaaccaacatagaactctaa 19225
to top
>gb|AE007306.1| Sinorhizobium meliloti 1021 plasmid pSymA section 112 of 121 of the
            complete plasmid sequence
          Length = 11758

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 104  catcaagtacaaacacaagaa 124
            |||||||||||||||||||||
Sbjct: 1094 catcaagtacaaacacaagaa 1114
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 398     ggcgatcctcttcttcttgtcggcg 422
               ||||||| |||||||||||||||||
Sbjct: 3860237 ggcgatcgtcttcttcttgtcggcg 3860261
to top
>gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, complete sequence
          Length = 165033

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 257  ttaagcagaggcagcaggagc 277
            |||||||||||||||||||||
Sbjct: 1327 ttaagcagaggcagcaggagc 1347
to top
>gb|AC124553.4| Mus musculus BAC clone RP23-223I5 from 1, complete sequence
          Length = 179316

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   ttaagcagaggcagcaggagc 277
             |||||||||||||||||||||
Sbjct: 24715 ttaagcagaggcagcaggagc 24695
to top
>dbj|D29796.1|XELXCFB Xenopus laevis mRNA for complement factor B
          Length = 3259

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 290  agacagctttgacctcctctt 310
            |||||||||||||||||||||
Sbjct: 1982 agacagctttgacctcctctt 1962
to top
>dbj|D49373.1|XELBFB Xenopus laevis mRNA for Bf B (complement factor B), complete cds
          Length = 2451

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 290  agacagctttgacctcctctt 310
            |||||||||||||||||||||
Sbjct: 1966 agacagctttgacctcctctt 1946
to top
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 141     aaacttccgacaataaagtagcca 164
               ||||||||||||| ||||||||||
Sbjct: 1893842 aaacttccgacaaaaaagtagcca 1893819
to top
>gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete sequence
          Length = 168540

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   cttcttggcgatcctcttct 411
             ||||||||||||||||||||
Sbjct: 18677 cttcttggcgatcctcttct 18658
to top
>gb|AY485613.1| Pichia guilliermondii DNA-dependent RNA polymerase II second largest
            subunit gene, partial cds
          Length = 3710

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  gtagccatgttcacgcaaaa 177
            ||||||||||||||||||||
Sbjct: 3272 gtagccatgttcacgcaaaa 3253
to top
>ref|XR_003042.1| PREDICTED: Mus musculus similar to putative pheromone receptor
            (Go-VN5) (LOC670595), mRNA
          Length = 2879

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 279  tttgtagcagcagacagctttgacctcc 306
            |||||||||||||||||| ||| |||||
Sbjct: 1483 tttgtagcagcagacagcattgccctcc 1456
to top
>ref|XM_913431.2| PREDICTED: Mus musculus similar to putative pheromone receptor
            (Go-VN5) (LOC627743), mRNA
          Length = 2961

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 279  tttgtagcagcagacagctttgacctcc 306
            |||||||||||||||||| ||| |||||
Sbjct: 1566 tttgtagcagcagacagcattgccctcc 1539
to top
>ref|XM_892444.2| PREDICTED: Mus musculus similar to putative pheromone receptor
            (Go-VN5) (LOC627743), mRNA
          Length = 2877

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 279  tttgtagcagcagacagctttgacctcc 306
            |||||||||||||||||| ||| |||||
Sbjct: 1482 tttgtagcagcagacagcattgccctcc 1455
to top
>emb|CR382284.13| Zebrafish DNA sequence from clone DKEY-95H16 in linkage group 8, complete
              sequence
          Length = 205882

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     tcaccatgttcatggtaaat 101
              ||||||||||||||||||||
Sbjct: 163073 tcaccatgttcatggtaaat 163092
to top
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   cctcttggccatgctctcac 324
             ||||||||||||||||||||
Sbjct: 82373 cctcttggccatgctctcac 82354
to top
>gb|AY223014.1| Schistosoma japonicum clone ZZD1110 mRNA sequence
          Length = 1288

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 352 tttgcgcaagcagcttctgg 371
           ||||||||||||||||||||
Sbjct: 128 tttgcgcaagcagcttctgg 147
to top
>gb|AC104843.3| Homo sapiens BAC clone RP11-1246H4 from 7, complete sequence
          Length = 126626

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    aagactggtggctcacacct 27
            ||||||||||||||||||||
Sbjct: 4013 aagactggtggctcacacct 4032
to top
>emb|AL359538.8| Human DNA sequence from clone RP11-556N21 on chromosome 13 Contains the
             3' end of a novel gene for a novel trancript similar to
             TPTE and PTEN homologous inositol lipid phosphatase
             (TPIP), a paraspeckle protein 1 alpha isoform pseudogene ,
              a TPTE and PTEN homologous inositol lipid phosphatase
             (TPIP) pseudogene and two CpG islands, complete sequence
          Length = 108645

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tggtggctcacacctctact 32
             ||||||||||||||||||||
Sbjct: 81886 tggtggctcacacctctact 81905
to top
>emb|AL034379.8|HS423B22 Human DNA sequence from clone RP3-423B22 on chromosome 1p33-35.3
             Contains the 3' end of the gene for a novel protein
             (FLJ23231), the gene for a novel protein (FLJ11730), the
             gene for Smad nuclear interacting protein (SNIP1)
             (FLJ14716, FLJ12553), a ferritin heavy polypeptide 1
             (FTH1) pseudogene, a ribosomal protein S27
             (metallopanstimulin 1) (RPS27) pseudogene, the DNALI1 gene
             for dynein axonemal light intermediate polypeptide 1 and
             the 3' end of the 3' end of the gene for  nucleolar GTPase
             (HUMAUANTIG), complete sequence
          Length = 112224

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tggtggctcacacctctact 32
             ||||||||||||||||||||
Sbjct: 32268 tggtggctcacacctctact 32287
to top
>emb|AL646091.4| Mouse DNA sequence from clone RP23-101K9 on chromosome 11, complete
             sequence
          Length = 133477

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   gcatcaagtacaaacacaag 122
             ||||||||||||||||||||
Sbjct: 12235 gcatcaagtacaaacacaag 12216
to top
>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence
          Length = 169125

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   cttaagcagaggcagcagga 275
             ||||||||||||||||||||
Sbjct: 61527 cttaagcagaggcagcagga 61546
to top
>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence
          Length = 186812

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    cttaagcagaggcagcagga 275
              ||||||||||||||||||||
Sbjct: 100314 cttaagcagaggcagcagga 100295
to top
>gb|AC008413.7| Homo sapiens chromosome 5 clone CTC-281M20, complete sequence
          Length = 143200

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    aagcagaggcagcaggagcc 278
              ||||||||||||||||||||
Sbjct: 127895 aagcagaggcagcaggagcc 127914
to top
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence
          Length = 157200

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  cttaagcagaggcagcagga 275
            ||||||||||||||||||||
Sbjct: 3125 cttaagcagaggcagcagga 3144
to top
>gb|AC139768.14| Homo sapiens 12 BAC RP11-454E5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 78491

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    tggtggctcacacctctact 32
             ||||||||||||||||||||
Sbjct: 66475 tggtggctcacacctctact 66456
to top
>gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, complete sequence
          Length = 175075

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    aagcagaggcagcaggagcc 278
              ||||||||||||||||||||
Sbjct: 144145 aagcagaggcagcaggagcc 144126
to top
>dbj|BS000088.1| Pan troglodytes chromosome 22 clone:RP43-078B15, map 22, complete
              sequences
          Length = 198333

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     aacatagaactctaacatactcat 68
              ||||||||||| ||||||||||||
Sbjct: 156719 aacatagaactttaacatactcat 156742
to top
>emb|BX784025.12| Zebrafish DNA sequence from clone DKEY-72L14 in linkage group 8,
             complete sequence
          Length = 257681

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tcaccatgttcatggtaaat 101
             ||||||||||||||||||||
Sbjct: 30325 tcaccatgttcatggtaaat 30344
to top
>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete
              sequence
          Length = 303641

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    cttcttggcgatcctcttct 411
              ||||||||||||||||||||
Sbjct: 202386 cttcttggcgatcctcttct 202367
to top
>dbj|AP001688.1| Homo sapiens genomic DNA, chromosome 21q, section 32/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     aacatagaactctaacatactcat 68
              ||||||||||| ||||||||||||
Sbjct: 100876 aacatagaactttaacatactcat 100899
to top
>dbj|D37942.1|WHTPH2B6A Triticum aestivum mRNA for protein H2B-6, complete cds
          Length = 564

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 391 tcttcttggcgatcctcttcttcttgtcggcg 422
           ||||||||||  || |||||||||||||||||
Sbjct: 136 tcttcttggccttcttcttcttcttgtcggcg 105
to top
>gb|AC130722.3| Mus musculus BAC clone RP24-358L24 from 3, complete sequence
          Length = 167780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   ctactccagtaacaaaactt 146
             ||||||||||||||||||||
Sbjct: 38326 ctactccagtaacaaaactt 38307
to top
>gb|AC138025.4| Mus musculus BAC clone RP24-430F5 from 8, complete sequence
          Length = 165737

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   cctcttggccatgctctcac 324
             ||||||||||||||||||||
Sbjct: 14193 cctcttggccatgctctcac 14212
to top
>gb|AC154369.1| Mus musculus BAC clone RP24-572H8 from 17, complete sequence
          Length = 165594

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 279   tttgtagcagcagacagctttgacctcc 306
             |||||||||||||||||| ||| |||||
Sbjct: 77499 tttgtagcagcagacagcattgccctcc 77472
to top
>gb|AC004369.1|AC004369 Drosophila melanogaster DNA sequence (P1 DS07066 (D70)), complete
             sequence
          Length = 77798

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   cttcttggcgatcctcttct 411
             ||||||||||||||||||||
Sbjct: 64172 cttcttggcgatcctcttct 64191
to top
>gb|AC169811.2| Rhesus Macaque CHR7 BAC CH250-119C16 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 166377

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tggtggctcacacctctact 32
             ||||||||||||||||||||
Sbjct: 25281 tggtggctcacacctctact 25300
to top
>dbj|AP000961.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B811H6,
             LL56-APP region, complete sequence
          Length = 165860

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 45    aacatagaactctaacatactcat 68
             ||||||||||| ||||||||||||
Sbjct: 34509 aacatagaactttaacatactcat 34532


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,780,972
Number of Sequences: 3902068
Number of extensions: 4780972
Number of successful extensions: 219938
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 219634
Number of HSP's gapped (non-prelim): 299
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top