ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197855.1| Oryza sativa (japonica cultivar-group) putative... 159 9e-36
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 159 9e-36
3gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003... 159 9e-36
4dbj|AK103988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 9e-36
5dbj|AK099409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 9e-36
6dbj|AK072102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 9e-36
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 159 9e-36
8ref|NM_197856.1| Oryza sativa (japonica cultivar-group) putative... 137 3e-29
9dbj|AK107685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.095
10emb|CT009489.6| Mouse DNA sequence from clone RP23-97F8 on chrom... 44 0.37
11gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosom... 44 0.37
12emb|BX664739.3| Human DNA sequence from clone WI2-89031B12 on ch... 44 0.37
13gb|AC145688.4| Pan troglodytes BAC clone CH251-346A10 from chrom... 44 0.37
14gb|L44140.1|HUMFLNG6PD Homo sapiens chromosome X region from fil... 44 0.37
15emb|X55448.1|HSG6PDGEN H.sapiens G6PD gene for glucose-6-phospha... 44 0.37
16gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome 42 1.5
17emb|AL031316.2|HS28O10 Human DNA sequence from clone RP1-28O10 o... 42 1.5
18emb|BX914216.14| Zebrafish DNA sequence from clone RP71-25N17 in... 42 1.5
19gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, compl... 42 1.5
20gb|AC146691.5| Macaca mulatta clone ch250-214a10, complete sequence 42 1.5
21gb|AC097014.2| Homo sapiens chromosome 3 clone RP11-29M1, comple... 42 1.5
22gb|AC025572.13|AC025572 Homo sapiens 3 BAC RP11-58O15 (Roswell P... 42 1.5
23emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in... 42 1.5
24ref|NM_001003212.1| Canis familiaris coagulation factor VIII, pr... 40 5.8
25gb|AF195646.1| Sparus aurata growth hormone gene, complete cds 40 5.8
26gb|AF411339.1| Homo sapiens brain-derived neurotrophic factor op... 40 5.8
27ref|XM_414434.1| PREDICTED: Gallus gallus similar to cell adhesi... 40 5.8
28gb|AY659395.1| Synthetic construct Peudomonas aeruginosa clone F... 40 5.8
29ref|XM_863863.1| PREDICTED: Bos taurus similar to Carbonyl reduc... 40 5.8
30gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subun... 40 5.8
31emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 5.8
32gb|AC087446.13| Homo sapiens chromosome 11, clone RP11-651M4, co... 40 5.8
33gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 5.8
34gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, c... 40 5.8
35emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, co... 40 5.8
36emb|BX530068.35| Zebrafish DNA sequence from clone CH211-1N9 in ... 40 5.8
37gb|AE009905.1|AE009905 Pyrobaculum aerophilum strain IM2 section... 40 5.8
38dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.8
39gb|AE004783.1| Pseudomonas aeruginosa PAO1, section 344 of 529 o... 40 5.8
40gb|AC104563.14| Homo sapiens chromosome 11, clone RP11-587D21, c... 40 5.8
41dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 5.8
42dbj|AP003481.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.8
43gb|AC004075.1|AC004075 Homo Sapiens Chromosome X clone bWXD90, c... 40 5.8
44gb|AF049489.1|AF049489 Canis familiaris factor VIII mRNA, comple... 40 5.8
45gb|AF016234.1|AF016234 Canis familiaris factor VIII (F8) mRNA, c... 40 5.8 
>ref|NM_197855.1| Oryza sativa (japonica cultivar-group) putative
           carnitine/acylcarnitine translocase (OSJNBa0003O19.8),
           mRNA
          Length = 1105

 Score =  159 bits (80), Expect = 9e-36
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                       
Query: 237 gtgatctcgtaggccacgaaggtggcggcatttgccgggacgctgcgggccatggcgggg 296
           |||| ||||||||||| ||||  |||||| || || ||||| ||||| |||||||| |||
Sbjct: 932 gtgacctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccggg 873

                                                                       
Query: 297 ccgaaccccttgtacaggcccttgaccccgtcggccgcgacgatcttctggaccgcgtcg 356
           ||||| |||||||| ||||||||||| |||||||| |||| |||||||  ||  ||||| 
Sbjct: 872 ccgaagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtcc 813

                                                                       
Query: 357 atcgacccggagtacctcggcttcttgtagtcgtccacctggatcacgctcttgacgacg 416
           || || ||||||||| | || ||||||||||||||||||||||| |||||||| || |||
Sbjct: 812 atggagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacg 753

                           
Query: 417 tcggtcgggtacaccg 432
           || |||||||||||||
Sbjct: 752 tccgtcgggtacaccg 737
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  159 bits (80), Expect = 9e-36
 Identities = 167/196 (85%)
 Strand = Plus / Plus

                                                                            
Query: 237      gtgatctcgtaggccacgaaggtggcggcatttgccgggacgctgcgggccatggcgggg 296
                |||| ||||||||||| ||||  |||||| || || ||||| ||||| |||||||| |||
Sbjct: 22255154 gtgacctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccggg 22255213

                                                                            
Query: 297      ccgaaccccttgtacaggcccttgaccccgtcggccgcgacgatcttctggaccgcgtcg 356
                ||||| |||||||| ||||||||||| |||||||| |||| |||||||  ||  ||||| 
Sbjct: 22255214 ccgaagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtcc 22255273

                                                                            
Query: 357      atcgacccggagtacctcggcttcttgtagtcgtccacctggatcacgctcttgacgacg 416
                || || ||||||||| | || ||||||||||||||||||||||| |||||||| || |||
Sbjct: 22255274 atggagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacg 22255333

                                
Query: 417      tcggtcgggtacaccg 432
                || |||||||||||||
Sbjct: 22255334 tccgtcgggtacaccg 22255349



 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Plus

                                                                            
Query: 264      gcatttgccgggacgctgcgggccatggcggggccgaaccccttgtacaggcccttgacc 323
                ||||| |||||||| || || |||||||| || || ||||||||||||| |||||| || 
Sbjct: 22257919 gcattggccgggacactacgagccatggcaggtccaaaccccttgtacaagcccttcact 22257978

                                                                            
Query: 324      ccgtcggccgcgacgatcttctggaccgcgtcgatcgacccggagtacctcggcttcttg 383
                || ||||||||||  ||||||| ||  |||||||  ||||| |||||||| |||||||||
Sbjct: 22257979 ccatcggccgcgagaatcttcttgaaagcgtcgactgaccctgagtaccttggcttcttg 22258038

                                                                 
Query: 384      tagtcgtccacctggatcacgctcttgacgacgtcggtcgggtacaccg 432
                ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 22258039 tagtcatccacctgaatcacgctcttcacgacgtcggtagggtaaaccg 22258087
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>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
             sequence
          Length = 172427

 Score =  159 bits (80), Expect = 9e-36
 Identities = 167/196 (85%)
 Strand = Plus / Plus

                                                                         
Query: 237   gtgatctcgtaggccacgaaggtggcggcatttgccgggacgctgcgggccatggcgggg 296
             |||| ||||||||||| ||||  |||||| || || ||||| ||||| |||||||| |||
Sbjct: 72397 gtgacctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccggg 72456

                                                                         
Query: 297   ccgaaccccttgtacaggcccttgaccccgtcggccgcgacgatcttctggaccgcgtcg 356
             ||||| |||||||| ||||||||||| |||||||| |||| |||||||  ||  ||||| 
Sbjct: 72457 ccgaagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtcc 72516

                                                                         
Query: 357   atcgacccggagtacctcggcttcttgtagtcgtccacctggatcacgctcttgacgacg 416
             || || ||||||||| | || ||||||||||||||||||||||| |||||||| || |||
Sbjct: 72517 atggagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacg 72576

                             
Query: 417   tcggtcgggtacaccg 432
             || |||||||||||||
Sbjct: 72577 tccgtcgggtacaccg 72592



 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Plus

                                                                         
Query: 264   gcatttgccgggacgctgcgggccatggcggggccgaaccccttgtacaggcccttgacc 323
             ||||| |||||||| || || |||||||| || || ||||||||||||| |||||| || 
Sbjct: 75162 gcattggccgggacactacgagccatggcaggtccaaaccccttgtacaagcccttcact 75221

                                                                         
Query: 324   ccgtcggccgcgacgatcttctggaccgcgtcgatcgacccggagtacctcggcttcttg 383
             || ||||||||||  ||||||| ||  |||||||  ||||| |||||||| |||||||||
Sbjct: 75222 ccatcggccgcgagaatcttcttgaaagcgtcgactgaccctgagtaccttggcttcttg 75281

                                                              
Query: 384   tagtcgtccacctggatcacgctcttgacgacgtcggtcgggtacaccg 432
             ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 75282 tagtcatccacctgaatcacgctcttcacgacgtcggtagggtaaaccg 75330
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>dbj|AK103988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A08, full
            insert sequence
          Length = 1209

 Score =  159 bits (80), Expect = 9e-36
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                        
Query: 237  gtgatctcgtaggccacgaaggtggcggcatttgccgggacgctgcgggccatggcgggg 296
            |||| ||||||||||| ||||  |||||| || || ||||| ||||| |||||||| |||
Sbjct: 1036 gtgacctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccggg 977

                                                                        
Query: 297  ccgaaccccttgtacaggcccttgaccccgtcggccgcgacgatcttctggaccgcgtcg 356
            ||||| |||||||| ||||||||||| |||||||| |||| |||||||  ||  ||||| 
Sbjct: 976  ccgaagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtcc 917

                                                                        
Query: 357  atcgacccggagtacctcggcttcttgtagtcgtccacctggatcacgctcttgacgacg 416
            || || ||||||||| | || ||||||||||||||||||||||| |||||||| || |||
Sbjct: 916  atggagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacg 857

                            
Query: 417  tcggtcgggtacaccg 432
            || |||||||||||||
Sbjct: 856  tccgtcgggtacaccg 841
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>dbj|AK099409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003D17, full
            insert sequence
          Length = 1230

 Score =  159 bits (80), Expect = 9e-36
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                        
Query: 237  gtgatctcgtaggccacgaaggtggcggcatttgccgggacgctgcgggccatggcgggg 296
            |||| ||||||||||| ||||  |||||| || || ||||| ||||| |||||||| |||
Sbjct: 1055 gtgacctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccggg 996

                                                                        
Query: 297  ccgaaccccttgtacaggcccttgaccccgtcggccgcgacgatcttctggaccgcgtcg 356
            ||||| |||||||| ||||||||||| |||||||| |||| |||||||  ||  ||||| 
Sbjct: 995  ccgaagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtcc 936

                                                                        
Query: 357  atcgacccggagtacctcggcttcttgtagtcgtccacctggatcacgctcttgacgacg 416
            || || ||||||||| | || ||||||||||||||||||||||| |||||||| || |||
Sbjct: 935  atggagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacg 876

                            
Query: 417  tcggtcgggtacaccg 432
            || |||||||||||||
Sbjct: 875  tccgtcgggtacaccg 860
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>dbj|AK072102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114C17, full
            insert sequence
          Length = 1230

 Score =  159 bits (80), Expect = 9e-36
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                        
Query: 237  gtgatctcgtaggccacgaaggtggcggcatttgccgggacgctgcgggccatggcgggg 296
            |||| ||||||||||| ||||  |||||| || || ||||| ||||| |||||||| |||
Sbjct: 1055 gtgacctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccggg 996

                                                                        
Query: 297  ccgaaccccttgtacaggcccttgaccccgtcggccgcgacgatcttctggaccgcgtcg 356
            ||||| |||||||| ||||||||||| |||||||| |||| |||||||  ||  ||||| 
Sbjct: 995  ccgaagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtcc 936

                                                                        
Query: 357  atcgacccggagtacctcggcttcttgtagtcgtccacctggatcacgctcttgacgacg 416
            || || ||||||||| | || ||||||||||||||||||||||| |||||||| || |||
Sbjct: 935  atggagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacg 876

                            
Query: 417  tcggtcgggtacaccg 432
            || |||||||||||||
Sbjct: 875  tccgtcgggtacaccg 860
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  159 bits (80), Expect = 9e-36
 Identities = 167/196 (85%)
 Strand = Plus / Plus

                                                                            
Query: 237      gtgatctcgtaggccacgaaggtggcggcatttgccgggacgctgcgggccatggcgggg 296
                |||| ||||||||||| ||||  |||||| || || ||||| ||||| |||||||| |||
Sbjct: 22267222 gtgacctcgtaggccaagaagcaggcggcgttggcggggacactgcgcgccatggccggg 22267281

                                                                            
Query: 297      ccgaaccccttgtacaggcccttgaccccgtcggccgcgacgatcttctggaccgcgtcg 356
                ||||| |||||||| ||||||||||| |||||||| |||| |||||||  ||  ||||| 
Sbjct: 22267282 ccgaagcccttgtagaggcccttgacgccgtcggcggcgaggatcttcctgaaggcgtcc 22267341

                                                                            
Query: 357      atcgacccggagtacctcggcttcttgtagtcgtccacctggatcacgctcttgacgacg 416
                || || ||||||||| | || ||||||||||||||||||||||| |||||||| || |||
Sbjct: 22267342 atggagccggagtacttggggttcttgtagtcgtccacctggatgacgctcttcaccacg 22267401

                                
Query: 417      tcggtcgggtacaccg 432
                || |||||||||||||
Sbjct: 22267402 tccgtcgggtacaccg 22267417



 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Plus

                                                                            
Query: 264      gcatttgccgggacgctgcgggccatggcggggccgaaccccttgtacaggcccttgacc 323
                ||||| |||||||| || || |||||||| || || ||||||||||||| |||||| || 
Sbjct: 22269987 gcattggccgggacactacgagccatggcaggtccaaaccccttgtacaagcccttcact 22270046

                                                                            
Query: 324      ccgtcggccgcgacgatcttctggaccgcgtcgatcgacccggagtacctcggcttcttg 383
                || ||||||||||  ||||||| ||  |||||||  ||||| |||||||| |||||||||
Sbjct: 22270047 ccatcggccgcgagaatcttcttgaaagcgtcgactgaccctgagtaccttggcttcttg 22270106

                                                                 
Query: 384      tagtcgtccacctggatcacgctcttgacgacgtcggtcgggtacaccg 432
                ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 22270107 tagtcatccacctgaatcacgctcttcacgacgtcggtagggtaaaccg 22270155
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>ref|NM_197856.1| Oryza sativa (japonica cultivar-group) putative
           carnitine/acylcarnitine translocase (OSJNBa0003O19.7),
           mRNA
          Length = 1580

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcatttgccgggacgctgcgggccatggcggggccgaaccccttgtacaggcccttgacc 323
           ||||| |||||||| || || |||||||| || || ||||||||||||| |||||| || 
Sbjct: 923 gcattggccgggacactacgagccatggcaggtccaaaccccttgtacaagcccttcact 864

                                                                       
Query: 324 ccgtcggccgcgacgatcttctggaccgcgtcgatcgacccggagtacctcggcttcttg 383
           || ||||||||||  ||||||| ||  |||||||  ||||| |||||||| |||||||||
Sbjct: 863 ccatcggccgcgagaatcttcttgaaagcgtcgactgaccctgagtaccttggcttcttg 804

                                                            
Query: 384 tagtcgtccacctggatcacgctcttgacgacgtcggtcgggtacaccg 432
           ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||
Sbjct: 803 tagtcatccacctgaatcacgctcttcacgacgtcggtagggtaaaccg 755
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>dbj|AK107685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-B03, full
            insert sequence
          Length = 1521

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 282  cgggccatggcggggccgaaccccttg 308
            |||||||||||||||||||| ||||||
Sbjct: 1308 cgggccatggcggggccgaagcccttg 1282
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>emb|CT009489.6| Mouse DNA sequence from clone RP23-97F8 on chromosome 14, complete
            sequence
          Length = 150382

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 104  tttttcctttcttttgtctgcc 125
            ||||||||||||||||||||||
Sbjct: 4947 tttttcctttcttttgtctgcc 4926
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>gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosome 14, complete sequence
          Length = 159082

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 104    tttttcctttcttttgtctgcc 125
              ||||||||||||||||||||||
Sbjct: 104580 tttttcctttcttttgtctgcc 104559
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>emb|BX664739.3| Human DNA sequence from clone WI2-89031B12 on chromosome X Contains the
             FAM3A gene for family with sequence similarity, the
             SLC10A3 3 gene for solute carrier family 10 (sodium/bile
             acid cotransporter family) member 3, the UBL4 gene for
             ubiquitin-like 4 and three CpG islands, complete sequence
          Length = 41279

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 100   ttaatttttcctttcttttgtctgcc 125
             ||||||||||||||||| ||||||||
Sbjct: 17720 ttaatttttcctttcttatgtctgcc 17695
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>gb|AC145688.4| Pan troglodytes BAC clone CH251-346A10 from chromosome x, complete
             sequence
          Length = 174819

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 100   ttaatttttcctttcttttgtctgcc 125
             ||||||||||||||||| ||||||||
Sbjct: 23188 ttaatttttcctttcttatgtctgcc 23163
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>gb|L44140.1|HUMFLNG6PD Homo sapiens chromosome X region from filamin (FLN) gene to
              glucose-6-phosphate dehydrogenase (G6PD) gene, complete
              cds's
          Length = 219447

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 100    ttaatttttcctttcttttgtctgcc 125
              ||||||||||||||||| ||||||||
Sbjct: 167984 ttaatttttcctttcttatgtctgcc 167959
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>emb|X55448.1|HSG6PDGEN H.sapiens G6PD gene for glucose-6-phosphate dehydrogenase
          Length = 52173

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 100   ttaatttttcctttcttttgtctgcc 125
             ||||||||||||||||| ||||||||
Sbjct: 51464 ttaatttttcctttcttatgtctgcc 51489
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>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   aatttttcctttcttttgtct 122
             |||||||||||||||||||||
Sbjct: 74677 aatttttcctttcttttgtct 74697
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>emb|AL031316.2|HS28O10 Human DNA sequence from clone RP1-28O10 on chromosome 1q32.2-41
             Contains the 5'end of the LAMB3 gene for laminin beta 3,
             the 3' end of a novel gene, the gene for  putative
             lymphocyte G0/G1 switch gene (G0S2) and the 5' end of the
             HSD11B1 gene for hydroxysteroid (11-beta) dehydrogenase 1,
             complete sequence
          Length = 97700

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   cccaattctgtctcagttgct 152
             |||||||||||||||||||||
Sbjct: 23926 cccaattctgtctcagttgct 23906
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>emb|BX914216.14| Zebrafish DNA sequence from clone RP71-25N17 in linkage group 18,
             complete sequence
          Length = 72914

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   tttttcctttcttttgtctgc 124
             |||||||||||||||||||||
Sbjct: 28853 tttttcctttcttttgtctgc 28873
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>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence
          Length = 152794

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 93   agaatggttaatttttcctttcttt 117
            ||||||| |||||||||||||||||
Sbjct: 2734 agaatggataatttttcctttcttt 2710
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>gb|AC146691.5| Macaca mulatta clone ch250-214a10, complete sequence
          Length = 152056

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   ttttcctttcttttgtctgcc 125
             |||||||||||||||||||||
Sbjct: 10278 ttttcctttcttttgtctgcc 10298
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>gb|AC097014.2| Homo sapiens chromosome 3 clone RP11-29M1, complete sequence
          Length = 143671

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 93    agaatggttaatttttcctttcttt 117
             ||||||| |||||||||||||||||
Sbjct: 10405 agaatggataatttttcctttcttt 10429
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>gb|AC025572.13|AC025572 Homo sapiens 3 BAC RP11-58O15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191510

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 93    agaatggttaatttttcctttcttt 117
             ||||||| |||||||||||||||||
Sbjct: 55809 agaatggataatttttcctttcttt 55833
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>emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in linkage group 18,
             complete sequence
          Length = 130348

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   tttttcctttcttttgtctgc 124
             |||||||||||||||||||||
Sbjct: 51846 tttttcctttcttttgtctgc 51826
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>ref|NM_001003212.1| Canis familiaris coagulation factor VIII, procoagulant component
            (hemophilia A) (F8), mRNA
          Length = 7145

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggttaatttttcctttcttt 117
            ||||||||||||||||||||
Sbjct: 3639 ggttaatttttcctttcttt 3620
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>gb|AF195646.1| Sparus aurata growth hormone gene, complete cds
          Length = 4276

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   cgaggttctgagaaacaatg 80
            ||||||||||||||||||||
Sbjct: 2921 cgaggttctgagaaacaatg 2902
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>gb|AF411339.1| Homo sapiens brain-derived neurotrophic factor opposite strand (BDNFOS)
             gene, partial sequence; and brain-derived neurotrophic
             factor (BDNF) gene, complete cds
          Length = 115886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   ttcctttcttttgtctgcca 126
             ||||||||||||||||||||
Sbjct: 48858 ttcctttcttttgtctgcca 48877
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>ref|XM_414434.1| PREDICTED: Gallus gallus similar to cell adhesion molecule with
            homology to L1CAM precursor; neural cell adhesion
            molecule; cell adhesion molecule L1-like; L1 cell
            adhesion molecule 2; cell adhesion molecule with homology
            to L1CAM (close homologue of L1) (LOC416102), mRNA
          Length = 4007

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 238  tgatctcgtaggccacgaaggtgg 261
            |||||||||||| |||||||||||
Sbjct: 3053 tgatctcgtagggcacgaaggtgg 3030
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>gb|AY659395.1| Synthetic construct Peudomonas aeruginosa clone FLH115724.01F
           PA3629 gene, partial cds
          Length = 1113

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 ggccacgaaggtggcggcat 267
           ||||||||||||||||||||
Sbjct: 184 ggccacgaaggtggcggcat 203
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>ref|XM_863863.1| PREDICTED: Bos taurus similar to Carbonyl reductase [NADPH] 1
           (NADPH-dependent carbonyl reductase 1)
           (Prostaglandin-E(2) 9-reductase) (Prostaglandin
           9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase
           [NADP+]) (LOC613272), mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 tttttcctttcttttgtctg 123
           ||||||||||||||||||||
Sbjct: 848 tttttcctttcttttgtctg 829
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>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2737

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 tttcttttgtctgccatgga 130
           ||||||||||||||||||||
Sbjct: 164 tttcttttgtctgccatgga 145
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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 319    tgaccccgtcggccgcgacgatcttctg 346
              |||| ||||| |||||||||||||||||
Sbjct: 300587 tgacgccgtccgccgcgacgatcttctg 300614
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>gb|AC087446.13| Homo sapiens chromosome 11, clone RP11-651M4, complete sequence
          Length = 167865

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    ttcctttcttttgtctgcca 126
              ||||||||||||||||||||
Sbjct: 100815 ttcctttcttttgtctgcca 100834
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     tttattatcaccaacgatcc 39
              ||||||||||||||||||||
Sbjct: 625118 tttattatcaccaacgatcc 625137
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>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence
          Length = 211799

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  ttcctttcttttgtctgcca 126
            ||||||||||||||||||||
Sbjct: 8414 ttcctttcttttgtctgcca 8395
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>emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, complete sequence
          Length = 244779

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    aaagaagaatggttaatttt 107
             ||||||||||||||||||||
Sbjct: 80754 aaagaagaatggttaatttt 80773
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>emb|BX530068.35| Zebrafish DNA sequence from clone CH211-1N9 in linkage group 13,
             complete sequence
          Length = 185626

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    aaagaagaatggttaatttt 107
             ||||||||||||||||||||
Sbjct: 52242 aaagaagaatggttaatttt 52223
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>gb|AE009905.1|AE009905 Pyrobaculum aerophilum strain IM2 section 160 of 201 of the complete
            genome
          Length = 13114

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  tcagcccatggccgaccgcg 237
            ||||||||||||||||||||
Sbjct: 4324 tcagcccatggccgaccgcg 4305
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 311     caggcccttgaccccgtcggccgcgacg 338
               ||||||||||||||||  ||||||||||
Sbjct: 2049910 caggcccttgaccccggtggccgcgacg 2049937
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>gb|AE004783.1| Pseudomonas aeruginosa PAO1, section 344 of 529 of the complete
            genome
          Length = 12207

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 248  ggccacgaaggtggcggcat 267
            ||||||||||||||||||||
Sbjct: 1900 ggccacgaaggtggcggcat 1881
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>gb|AC104563.14| Homo sapiens chromosome 11, clone RP11-587D21, complete sequence
          Length = 141200

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ttcctttcttttgtctgcca 126
              ||||||||||||||||||||
Sbjct: 125580 ttcctttcttttgtctgcca 125561
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 116     tttgtctgccatggatcccaattc 139
               |||||| |||||||||||||||||
Sbjct: 2276479 tttgtccgccatggatcccaattc 2276502
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>dbj|AP003481.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-11E12, complete
             sequence
          Length = 138317

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   ttaatttttcctttcttttg 119
             ||||||||||||||||||||
Sbjct: 37895 ttaatttttcctttcttttg 37876
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>gb|AC004075.1|AC004075 Homo Sapiens Chromosome X clone bWXD90, complete sequence
          Length = 104961

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  ttaatttttcctttcttttg 119
            ||||||||||||||||||||
Sbjct: 8265 ttaatttttcctttcttttg 8284
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>gb|AF049489.1|AF049489 Canis familiaris factor VIII mRNA, complete cds
          Length = 7145

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggttaatttttcctttcttt 117
            ||||||||||||||||||||
Sbjct: 3639 ggttaatttttcctttcttt 3620
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>gb|AF016234.1|AF016234 Canis familiaris factor VIII (F8) mRNA, complete cds
          Length = 7032

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggttaatttttcctttcttt 117
            ||||||||||||||||||||
Sbjct: 3639 ggttaatttttcctttcttt 3620


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,238,868
Number of Sequences: 3902068
Number of extensions: 3238868
Number of successful extensions: 81783
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81591
Number of HSP's gapped (non-prelim): 192
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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