Clone Name | rbart30g12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KRA63_HUMAN (Q3LI67) Keratin-associated protein 6-3 | 25 | 3.8 | 2 | MT_NEUCR (P02807) Metallothionein (MT) | 29 | 7.6 | 3 | SOCS3_CHICK (Q90X67) Suppressor of cytokine signaling 3 (SOCS-3) | 29 | 7.6 | 4 | WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7... | 28 | 9.9 |
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>KRA63_HUMAN (Q3LI67) Keratin-associated protein 6-3| Length = 103 Score = 25.4 bits (54), Expect(2) = 3.8 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -1 Query: 102 GAGGLNCETFSFCHCG 55 G GGL C SFC CG Sbjct: 50 GYGGLGCGYGSFCGCG 65 Score = 23.5 bits (49), Expect(2) = 3.8 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -3 Query: 229 GFGFGFCSYGVSSYRVL 179 G G+G C YG YR L Sbjct: 24 GCGYGGCGYGCCGYRGL 40
>MT_NEUCR (P02807) Metallothionein (MT)| Length = 25 Score = 28.9 bits (63), Expect = 7.6 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -1 Query: 96 GGLNCETFSFCHCGVHCSTVNCASR 22 G C S C+CG CS NC S+ Sbjct: 1 GDCGCSGASSCNCGSGCSCSNCGSK 25
>SOCS3_CHICK (Q90X67) Suppressor of cytokine signaling 3 (SOCS-3)| Length = 209 Score = 28.9 bits (63), Expect = 7.6 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Frame = +1 Query: 73 EGFTIQTTSPSDQNQPNAQFSCIYTLTHHTMG*VYL----EPGNYLHRKNKTQNQS-RKP 237 EG + S +QP +F C+ L HH M +PG LH K S + Sbjct: 98 EGGSFSLQSDPRSSQPVPRFDCVLKLVHHYMPPTPCAGPKQPGGALHPKRTYYIYSGGEK 157 Query: 238 VPVLPTRP 261 +P++ +RP Sbjct: 158 IPLVLSRP 165
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 28.5 bits (62), Expect = 9.9 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 235 PVPVLPTRPDPYVQHI*SWTCRAATP 312 P P LP RP+P H+ AATP Sbjct: 994 PQPALPVRPEPLQPHLPEQAAPAATP 1019 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,379,466 Number of Sequences: 219361 Number of extensions: 1221601 Number of successful extensions: 3244 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3243 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)