ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart30g11 |
|---|---|
| Clone Library Name | barley_pub |
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 121 bits (304), Expect = 8e-28 Identities = 61/82 (74%), Positives = 66/82 (80%), Gaps = 4/82 (4%) Frame = -1 Query: 469 RFVGGEGR----LLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFT 302 RFV G G LL +VVWSNGPE P+EGNKQCPGKDMV AVGRLMVA LFRRYDTF Sbjct: 420 RFVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFA 479 Query: 301 ADVKEMPLEPVVTFTSLTTRAE 236 ADV+E+PLEPVVTFTSLT A+ Sbjct: 480 ADVEELPLEPVVTFTSLTRAAD 501
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 116 bits (291), Expect = 2e-26 Identities = 56/70 (80%), Positives = 60/70 (85%) Frame = -1 Query: 457 GEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVKEMPL 278 G+ LL +VVWSNGPE P+EGNKQCPGKDMV AVGRLMVAELFRRYDTF ADV E P+ Sbjct: 426 GDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAADVVEAPV 485 Query: 277 EPVVTFTSLT 248 EPVVTFTSLT Sbjct: 486 EPVVTFTSLT 495
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 85.1 bits (209), Expect = 8e-17 Identities = 43/74 (58%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Frame = -1 Query: 469 RFVGGEG-RLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADV 293 RFVG EG +LL +V+WSNGPE P GNKQC GKD V V RL V E+FRRYD+F +V Sbjct: 440 RFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV 499 Query: 292 KEMPLEPVVTFTSL 251 PL V F+SL Sbjct: 500 GTSPLGSSVNFSSL 513
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 78.2 bits (191), Expect = 1e-14 Identities = 40/73 (54%), Positives = 44/73 (60%) Frame = -1 Query: 469 RFVGGEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVK 290 RFVG LL V WSNGPE P NKQC GKD V + RL V ELFRRYD+F ++ Sbjct: 396 RFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELG 455 Query: 289 EMPLEPVVTFTSL 251 E PL VT T L Sbjct: 456 ESPLGAAVTLTFL 468
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 77.4 bits (189), Expect = 2e-14 Identities = 38/59 (64%), Positives = 44/59 (74%), Gaps = 1/59 (1%) Frame = -1 Query: 469 RFVGGEGR-LLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTAD 296 RFVG EGR LL V WSNG E P+ NKQCPGK++V VGRL++ ELF RYDTFTA+ Sbjct: 398 RFVGEEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFTAE 456
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 76.3 bits (186), Expect = 4e-14 Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Frame = -1 Query: 469 RFVGGEG-RLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADV 293 RF+G +G RLL +VVWSNGPE + P +KQC GKD V V RL++ ELF RYD+F +V Sbjct: 434 RFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEV 493 Query: 292 KEMPLEPVVTFTSL 251 L VT TSL Sbjct: 494 GTSTLGSSVTVTSL 507
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 75.9 bits (185), Expect = 5e-14 Identities = 37/73 (50%), Positives = 45/73 (61%) Frame = -1 Query: 469 RFVGGEGRLLGNVVWSNGPENSEPAEGNKQCPGKDMVTAVGRLMVAELFRRYDTFTADVK 290 RFVG +L+ V+WSNGPE P+ NKQC GKD V RL V ELF+RYD+F +V Sbjct: 459 RFVGEGVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDSFDIEVG 518 Query: 289 EMPLEPVVTFTSL 251 L +T TSL Sbjct: 519 TSSLGASITLTSL 531
>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) (EGA) Length = 962 Score = 32.3 bits (72), Expect = 0.62 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = +3 Query: 132 GLASST----VYYSNYYCGSAGATWQLHYSSTVCYYYSHSALVVSEVNVTTGSSGISFTS 299 G+A+ T VY+S+Y+ GS+ + ++ SS+ S SA+V S +V + SS S S Sbjct: 804 GVATETTFVSVYFSDYFPGSSSSASNINSSSSSSSSSSSSAIVSSSSSVVSSSSS-SAAS 862 Query: 300 AVNVSY 317 N Y Sbjct: 863 GGNCQY 868
>EG52_XENLA (Q91783) Kinesin-related motor protein Eg5 2| Length = 1067 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Frame = +3 Query: 159 SNYYCGSAGATWQLHYSSTVCYYYSHSALVVS---EVNVTTGSSGISFTSAVNVSYRRNS 329 S +C SAG VCY +S + + +V GSS + T VNV + Sbjct: 826 SQQWCESAGQKMDSLLEEQVCYLHSSKKQIQTLHKDVEDGCGSSVVEITDRVNVQCQAQE 885 Query: 330 SATISL 347 A SL Sbjct: 886 KALTSL 891
>YVED_VACCC (P20556) Hypothetical 7.6 kDa protein| Length = 66 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = -1 Query: 352 VGRLMVAELFRRYDTFTADVKEMPLEPVVTFTSLT 248 VGR AE FRRYDT+ + + + V TF+S T Sbjct: 13 VGR---AENFRRYDTYLPENDPLAMNSVFTFSSYT 44
>YK02_SCHPO (Q9HDY9) Hypothetical serine/threonine-rich protein P11E10.02c| precursor Length = 1082 Score = 28.9 bits (63), Expect = 6.8 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 18/149 (12%) Frame = +3 Query: 21 QVQTITPQRTLHNR-------QHTHVTC----PLNLIMQI*PEMQQTSGLASSTVYYSNY 167 QV+T+T TL HT +T P N I +S + SS VY Sbjct: 411 QVETLTYVTTLTETILTTTYDSHTFLTTITPSPSNSISYTNNTFIPSSSIKSSIVY---- 466 Query: 168 YCGSAGATWQLHYSSTVCYYYSHSALVVSEVNVTTGSSGISFTSAVNVSYRR-------N 326 S T +Y+S+ + S S +V+ VN + +S SFT ++S + + Sbjct: 467 ---SVTPTSAENYTSSEAFSTSSSLVVIPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTS 523 Query: 327 SSATISLPTAVTMSFPGHCLFPSAGSLFS 413 +S+++SL A + P++ S S Sbjct: 524 ASSSLSLTNAKSSLSTPSTTIPTSNSSVS 552
>TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 homolog| (Intermediate chain 1) Length = 837 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 398 GGGEQAVPREGHGDGGWEANGG 333 GGGE+AV EG G+G + GG Sbjct: 806 GGGEEAVATEGGGEGDAKPEGG 827
>PRXV_ASCNO (P81701) Vanadium haloperoxidase (EC 1.11.1.-) (V-BPO)| Length = 557 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +3 Query: 297 SAVNVSYRRNSSATISLPTAVTMSFPGHCLFPSAGSLFSGPF 422 +A+N + N+ T LP A+ P H +PS + +G F Sbjct: 384 AAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAF 425
>C78AB_ORYSA (Q7Y1V5) Cytochrome P450 78A11 (EC 1.14.-.-) (PLASTOCHRON1 protein)| Length = 555 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -1 Query: 391 GNKQCPGKDMVTAVGRLMVAELFRRYDTFTAD 296 G + CPGK++ A L VA L +D F D Sbjct: 491 GRRVCPGKNLGLATVTLWVARLVHAFDWFLPD 522
>SYA_PROMA (Q7VEG5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 892 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 222 YYYSHSALVVSEVNVTTGSSGISFTSAVNVSYRRNSSATIS 344 YY H L E+++ + I F + V + Y RNSS T++ Sbjct: 184 YYDFHPELGEEEIDLEDDTRFIEFYNLVFMQYNRNSSGTLT 224 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,260,125 Number of Sequences: 219361 Number of extensions: 889743 Number of successful extensions: 2664 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2541 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2659 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
