ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart30g10 |
|---|---|
| Clone Library Name | barley_pub |
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 89.4 bits (220), Expect = 5e-18 Identities = 37/74 (50%), Positives = 53/74 (71%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPA 326 DGD+V +++ + S W PM+ SWG+IWR+D+ L+ PFS+R+T+ESGK ++A VIPA Sbjct: 195 DGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPA 254 Query: 325 NWAPSTFYRSIVQY 284 NW P Y S VQ+ Sbjct: 255 NWRPDAVYTSNVQF 268
>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)| (Fragment) Length = 191 Score = 89.0 bits (219), Expect = 7e-18 Identities = 36/74 (48%), Positives = 53/74 (71%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPA 326 DGD+V +++ + S W PM+ SWG+IWR+D+ L+ PFS+R+T+ESGK ++A +IPA Sbjct: 117 DGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPA 176 Query: 325 NWAPSTFYRSIVQY 284 NW P Y S VQ+ Sbjct: 177 NWRPDAVYTSNVQF 190
>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1| Length = 246 Score = 84.3 bits (207), Expect = 2e-16 Identities = 37/74 (50%), Positives = 51/74 (68%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPA 326 DG++V VD+ +S + PM+ SWG+IWR+D L+ PFS+R+T+E G LV D VIPA Sbjct: 171 DGNIVAVDIKPRDSDEFIPMKSSWGAIWRIDPKKPLKGPFSIRLTSEGGAHLVQDDVIPA 230 Query: 325 NWAPSTFYRSIVQY 284 NW P T Y S +Q+ Sbjct: 231 NWKPDTVYTSKLQF 244
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 79.7 bits (195), Expect = 4e-15 Identities = 36/76 (47%), Positives = 54/76 (71%), Gaps = 2/76 (2%) Frame = -3 Query: 505 DGDVVQVDLMEA-NSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITN-ESGKTLVADKVI 332 DG++ +++L +A +S W M +SWG++W+LD L+AP S+R+T+ ESGKT+VA VI Sbjct: 198 DGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVI 257 Query: 331 PANWAPSTFYRSIVQY 284 PANW P Y+S V + Sbjct: 258 PANWQPGAIYKSNVNF 273
>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)| Length = 263 Score = 74.3 bits (181), Expect = 2e-13 Identities = 32/70 (45%), Positives = 42/70 (60%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPA 326 DGDVV VD+ E W ++ESWG+IWR+D+ +L PF++R T E G A+ VIP Sbjct: 193 DGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAEDVIPE 252 Query: 325 NWAPSTFYRS 296 W T Y S Sbjct: 253 GWKADTSYES 262
>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l| 1.0101 and 1.0102) Length = 265 Score = 71.2 bits (173), Expect = 1e-12 Identities = 30/70 (42%), Positives = 42/70 (60%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPA 326 DGDVV VD+ E W ++ESWG++WR+D+ +L PF++R T E G A+ VIP Sbjct: 195 DGDVVAVDIKEKGKDKWIELKESWGAVWRVDTPDKLTGPFTVRYTTEGGTKGEAEDVIPE 254 Query: 325 NWAPSTFYRS 296 W T Y + Sbjct: 255 GWKADTAYEA 264
>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)| Length = 263 Score = 69.7 bits (169), Expect = 4e-12 Identities = 29/68 (42%), Positives = 40/68 (58%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPA 326 DGDVV VD+ E W ++ESWG++WR+D+ +L PF++R T E G + VIP Sbjct: 193 DGDVVAVDIKEKGKDKWIELKESWGAVWRIDTPDKLTGPFTVRYTTEGGTKSEFEDVIPE 252 Query: 325 NWAPSTFY 302 W T Y Sbjct: 253 GWKADTSY 260
>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)| Length = 269 Score = 68.6 bits (166), Expect = 9e-12 Identities = 29/66 (43%), Positives = 39/66 (59%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPA 326 DGDVV VD+ E W ++ESWG+IWR+D+ +L PF++R T E G + VIP Sbjct: 199 DGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKAEFEDVIPE 258 Query: 325 NWAPST 308 W T Sbjct: 259 GWKADT 264
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 67.0 bits (162), Expect = 3e-11 Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITN-ESGKTLVADKVIP 329 DGD+ V++ A G++ M+E ++W+++SG L+ PF++R+T+ ES K +VA VIP Sbjct: 186 DGDLSNVEIQPAG-GSFISMQEMRSAVWKVNSGSALRGPFNIRLTSGESHKVIVAYNVIP 244 Query: 328 ANWAPSTFYRSIVQY 284 ANW P YRSIV + Sbjct: 245 ANWKPDESYRSIVNF 259
>MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Ory s I)| Length = 263 Score = 65.5 bits (158), Expect = 8e-11 Identities = 27/59 (45%), Positives = 40/59 (67%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIP 329 DGDVV+V++ E S W ++ESWG+IWR+D+ L+ PFS+R+T E + A+ IP Sbjct: 190 DGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGARRSSAEDAIP 248
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 59.3 bits (142), Expect = 6e-09 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNES-GKTLVADKVIP 329 +GD+ + + +A + W M+ WG+ W + G L+ PFS+++T S GKTL A V+P Sbjct: 187 EGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGP-LKGPFSIKLTTLSAGKTLSATDVVP 245 Query: 328 ANWAPSTFYRSIVQYS 281 NWAP Y S + +S Sbjct: 246 RNWAPKATYSSRLNFS 261
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 57.8 bits (138), Expect = 2e-08 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESG-KTLVADKVIP 329 +GD+ + + +A S W M+ WG+ W + G L+ PFS+++T S KTL A VIP Sbjct: 194 EGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGP-LKGPFSVKLTTLSNNKTLSATDVIP 252 Query: 328 ANWAPSTFYRSIVQYS 281 +NW P Y S + +S Sbjct: 253 SNWVPKATYTSRLNFS 268
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 54.3 bits (129), Expect = 2e-07 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNE-SGKTLVADKVIP 329 DG+ +++ A G + M E ++WRL G L+ PF++R+T+ SGK ++A VIP Sbjct: 184 DGNFACIEVQPAG-GQYMKMEEMRSAVWRLSPGVPLKGPFNIRLTSAVSGKKIIAKGVIP 242 Query: 328 ANWAPSTFYRSIVQY 284 W+P Y S V + Sbjct: 243 EKWSPGAIYHSKVNF 257
>MPAL2_LOLPR (P14947) Pollen allergen Lol p 2-A (Lol p II-A)| Length = 97 Score = 48.5 bits (114), Expect = 1e-05 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Frame = -3 Query: 505 DGD-VVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIP 329 +GD + +V+L E S W ++++ +W + S L+ PF+ R +E G V D V+P Sbjct: 26 EGDSMAEVELKEHGSNEWLALKKNGDGVWEIKSDKPLKGPFNFRFVSEKGMRNVFDDVVP 85 Query: 328 ANWAPSTFYR 299 A++ T Y+ Sbjct: 86 ADFKVGTTYK 95
>MPAP2_PHLPR (P43214) Pollen allergen Phl p 2 precursor (Phl p II)| Length = 122 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = -3 Query: 505 DGDVV-QVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIP 329 +GD + +V+L E S W M + G +W DS LQ PF+ R E G V D V+P Sbjct: 50 EGDTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFLTEKGMKNVFDDVVP 109 Query: 328 ANWAPSTFY 302 + Y Sbjct: 110 EKYTIGATY 118
>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)| (Ath-ExpAlpha-1.11) Length = 253 Score = 45.8 bits (107), Expect = 7e-05 Identities = 21/61 (34%), Positives = 35/61 (57%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GDV V + + + +W M +WG W+ +S Q+ S ++T G+TLV++ V P+N Sbjct: 183 GDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQS-LSFQVTTSDGRTLVSNDVAPSN 241 Query: 322 W 320 W Sbjct: 242 W 242
>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)| (Ath-ExpBeta-2.3) Length = 263 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = -3 Query: 499 DVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNE-SGKTLVADKVIPAN 323 +VV +D+ S W+ M S G++W D F +T GKT+ + +V+PAN Sbjct: 175 EVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPAN 234 Query: 322 WAPSTFYRSIVQ 287 W Y + VQ Sbjct: 235 WNSGRIYDAGVQ 246
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 42.4 bits (98), Expect = 7e-04 Identities = 19/61 (31%), Positives = 35/61 (57%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD+ V L + + W M +WG W+ ++ R Q+ S ++T+ G+T+V+ V+P + Sbjct: 185 GDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQS-LSFQVTDSDGRTVVSYDVVPHD 243 Query: 322 W 320 W Sbjct: 244 W 244
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 42.4 bits (98), Expect = 7e-04 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GDV+ V + N+ W M +WG W+ ++ QA S ++T G+T++++ P N Sbjct: 182 GDVISVSIKGTNT-RWQSMSRNWGQNWQSNAKLDGQA-LSFKVTTSDGRTVISNNATPRN 239 Query: 322 WA 317 W+ Sbjct: 240 WS 241
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD+ V + + +G W PM +WG W +++ R QA S +T+ T+ + V P N Sbjct: 194 GDIAAVKIKGSRTG-WLPMGRNWGQNWHINADLRNQA-LSFEVTSSDRSTVTSYNVSPKN 251 Query: 322 W 320 W Sbjct: 252 W 252
>MPAG3_DACGL (P93124) Pollen allergen Dac g 3 (Dac g III) (Fragment)| Length = 96 Score = 40.8 bits (94), Expect = 0.002 Identities = 20/65 (30%), Positives = 34/65 (52%) Frame = -3 Query: 496 VVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWA 317 + +V+L + S W P+ + G++W + S L PF+ R ++ G V D+VIP + Sbjct: 29 LAEVELRQHGSEEWEPLTKK-GNLWEVKSSKPLTGPFNFRFMSKGGMRNVFDEVIPTAFK 87 Query: 316 PSTFY 302 T Y Sbjct: 88 IGTTY 92
>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)| (Ath-ExpAlpha-1.14) Length = 252 Score = 39.7 bits (91), Expect = 0.005 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 G + V + + +G W M +WG+ W+ ++ QA S IT G T V V+P++ Sbjct: 182 GSIKSVSIKGSKTG-WLAMSRNWGANWQSNAYLDGQA-LSFSITTTDGATRVFLNVVPSS 239 Query: 322 WAPSTFYRSIVQY 284 W+ Y S VQ+ Sbjct: 240 WSFGQIYSSNVQF 252
>EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXPL2)| (Ath-ExpBeta-2.2) Length = 265 Score = 38.1 bits (87), Expect = 0.014 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = -3 Query: 499 DVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRIT-NESGKTLVADKVIPAN 323 +VV + + + S W+ M S G++W D F +T GK + + +V+PAN Sbjct: 176 EVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPAN 235 Query: 322 WAPSTFYRSIVQ 287 W Y + VQ Sbjct: 236 WEAGKSYDAGVQ 247
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 38.1 bits (87), Expect = 0.014 Identities = 19/62 (30%), Positives = 35/62 (56%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GDV V ++ + W M +WG W+ ++ QA S ++T G+T+V++ + PA+ Sbjct: 178 GDVHSV-AVKGSRTRWQQMSRNWGQNWQSNNLLNGQA-LSFKVTASDGRTVVSNNIAPAS 235 Query: 322 WA 317 W+ Sbjct: 236 WS 237
>MPAL3_LOLPR (P14948) Pollen allergen Lol p 3 (Lol p III)| Length = 97 Score = 38.1 bits (87), Expect = 0.014 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -3 Query: 496 VVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWA 317 + +V+L + S W PM + G++W + S L P + R ++ G V D+VIP + Sbjct: 29 LAEVELRQHGSEEWEPMTKK-GNLWEVKSAKPLTGPMNFRFLSKGGMKNVFDEVIPTAFT 87 Query: 316 PSTFY 302 Y Sbjct: 88 VGKTY 92
>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)| (Ath-ExpAlpha-1.23) Length = 256 Score = 37.7 bits (86), Expect = 0.018 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPA 326 DG+VV V + + ++ W PM +WG W S + S +T + GKT+ + V P Sbjct: 184 DGEVVGVKV-KGHTTAWIPMARNWGQNWH-SSLDLIGQSLSFEVTLKGGKTIASYDVAPP 241 Query: 325 NW 320 W Sbjct: 242 YW 243
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 36.2 bits (82), Expect = 0.052 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GDV + + +G W M +WG W+ +S Q+ S ++T G+T+V++ V A Sbjct: 180 GDVHSAMVKGSRTG-WQAMSRNWGQNWQSNSYLNGQS-LSFKVTTSDGQTIVSNNVANAG 237 Query: 322 WA 317 W+ Sbjct: 238 WS 239
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 36.2 bits (82), Expect = 0.052 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -3 Query: 457 WTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWA 317 W M +WG W+ +S QA S ++T G+T+V+ PA W+ Sbjct: 193 WQAMSRNWGQNWQSNSYLNGQA-LSFKVTTSDGRTVVSFNAAPAGWS 238
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 35.8 bits (81), Expect = 0.068 Identities = 17/61 (27%), Positives = 33/61 (54%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD+V+ + + +G W + +WG W+ ++ QA S R+T +T + ++P+N Sbjct: 186 GDIVRASVKGSRTG-WMSLSRNWGQNWQSNAVLVGQA-LSFRVTGSDRRTSTSWNMVPSN 243 Query: 322 W 320 W Sbjct: 244 W 244
>EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXPL1)| (Ath-ExpBeta-2.1) Length = 265 Score = 35.8 bits (81), Expect = 0.068 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Frame = -3 Query: 499 DVVQVDLMEANSG-TWTPMRESWGSIWRLDSGHRLQAPFSMRITNE-SGKTLVADKVIPA 326 +VV +D+ + S W M S G++W D F +T GK + + V+P+ Sbjct: 175 EVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPS 234 Query: 325 NWAPSTFYRSIVQ 287 NW Y + VQ Sbjct: 235 NWEAGKIYDAGVQ 247
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 35.4 bits (80), Expect = 0.089 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITN-ESGKTLVADKVIPA 326 GD+ + ++ + W M +WG+ ++ S Q+ S R+T+ +G+T+ A V PA Sbjct: 190 GDIKSM-AVKGSRTNWISMSHNWGASYQAFSSLYGQS-LSFRVTSYTTGETIYAWNVAPA 247 Query: 325 NWAPSTFYRSIVQY 284 NW+ Y+S + Sbjct: 248 NWSGGKTYKSTANF 261
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/61 (32%), Positives = 29/61 (47%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD+ V + E +G W M+++WG W + Q S R+T G T V+P N Sbjct: 209 GDIKYVQVKENKTG-WITMKKNWGQNWTTSTVLTGQG-LSFRVTTTDGITKDFWNVMPKN 266 Query: 322 W 320 W Sbjct: 267 W 267
>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)| (Expansin S2) (Ath-ExpAlpha-1.24) Length = 252 Score = 35.0 bits (79), Expect = 0.12 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 G V V + + TW M +WG+ W+ SG S ++T KT V+P++ Sbjct: 179 GSVRSVAVRGSKGKTWLQMTRNWGANWQ-SSGDLRGQRLSFKVTLTDSKTQTFLNVVPSS 237 Query: 322 W 320 W Sbjct: 238 W 238
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 33.9 bits (76), Expect = 0.26 Identities = 20/48 (41%), Positives = 23/48 (47%) Frame = -1 Query: 474 RPTPVRGRRCASRGDQSGGWTPATASRRPSPCASPTSPARRWWPTRSS 331 +P P G SR QSGG RRPSP PT P P+RS+ Sbjct: 233 QPRPQGG----SRSQQSGGQERQGGGRRPSPAMMPTHPNPGQMPSRSN 276
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 33.1 bits (74), Expect = 0.44 Identities = 17/73 (23%), Positives = 36/73 (49%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 G++ +V + + S W M +WG+ ++ ++ Q+ S ++ G A V+P+N Sbjct: 184 GEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQS-LSFKVQLSDGSIKAALNVVPSN 242 Query: 322 WAPSTFYRSIVQY 284 W ++S V + Sbjct: 243 WRFGQSFKSNVNF 255
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 32.7 bits (73), Expect = 0.58 Identities = 15/61 (24%), Positives = 32/61 (52%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD+ + + + +G W + +WG W+ ++ Q+ S R+T+ +T + + P+N Sbjct: 189 GDIARTSVKGSKTG-WMSLTRNWGQNWQSNAVLVGQS-LSFRVTSSDRRTSTSWNIAPSN 246 Query: 322 W 320 W Sbjct: 247 W 247
>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)| (Ath-ExpAlpha-1.17) Length = 269 Score = 32.3 bits (72), Expect = 0.75 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD+ + + +G W M+++WG W Q S R+T G T + V+P N Sbjct: 199 GDIKLMQVKGDKTG-WITMQKNWGQNWTTGVNLTGQG-ISFRVTTSDGVTKDFNNVMPNN 256 Query: 322 W 320 W Sbjct: 257 W 257
>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)| (AtEx25) (Ath-ExpAlpha-1.18) Length = 276 Score = 32.3 bits (72), Expect = 0.75 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD+ + + +G W M+++WG W Q S R+T G T + V+P N Sbjct: 206 GDIKLMQVKGDKTG-WITMQKNWGQNWTTGVNLTGQG-ISFRVTTSDGVTKDFNNVMPNN 263 Query: 322 W 320 W Sbjct: 264 W 264
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 32.3 bits (72), Expect = 0.75 Identities = 16/61 (26%), Positives = 34/61 (55%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 G++V++ + ++ +W M +WG W+ +S Q+ S R+T+ ++ + + PAN Sbjct: 186 GNIVRLGVKGTHT-SWMTMSRNWGQNWQSNSVLVGQS-LSFRVTSSDRRSSTSWNIAPAN 243 Query: 322 W 320 W Sbjct: 244 W 244
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 32.3 bits (72), Expect = 0.75 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD++ V + + W M WG W + Q+ S+R+T G T V+PA+ Sbjct: 186 GDIIAVSA-KGSKTAWVVMSRYWGQNWTTNVNLTGQS-VSLRVTTSDGITKDFTDVMPAS 243 Query: 322 W 320 W Sbjct: 244 W 244
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 32.0 bits (71), Expect = 0.98 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = -3 Query: 502 GDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 GD+ V + + N W M+++WG W + Q S R+T G T V+P N Sbjct: 203 GDIKYVQV-KGNKTGWITMKKNWGQNWTTITVLTGQG-LSFRVTTSDGITKDFWNVMPKN 260 Query: 322 W 320 W Sbjct: 261 W 261
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 30.8 bits (68), Expect = 2.2 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -1 Query: 471 PTPVRGRRCASRGDQSGGWTPAT-ASRRPSPCASPTSPARRWWPTRSSRP 325 PTP RGR C R S G T ++ S P SP R+ PT S P Sbjct: 854 PTPPRGRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGP 903
>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 30.8 bits (68), Expect = 2.2 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = -1 Query: 471 PTPVRGRRCASRGDQSGGWTPATASRRPSPCASPTSPAR 355 P P R RR D G PA A P P SP +P R Sbjct: 727 PPPRRARRSQRHSDARGTPPPAPARDPPPPAPSPPAPPR 765
>GHRHR_RAT (Q02644) Growth hormone-releasing hormone receptor precursor (GHRH| receptor) (GRF receptor) (GRFR) Length = 464 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Frame = +1 Query: 271 SSFSCTGRWSGRRCWAPS----WPG*PC 342 SS C G W G CW P+ W PC Sbjct: 51 SSMGCPGTWDGLLCWPPTGSGQWVSLPC 78
>DSG1_BOVIN (Q03763) Desmoglein-1 precursor (Desmosomal glycoprotein 1) (DG1)| (DGI) (Pemphigus foliaceus antigen) Length = 1043 Score = 30.0 bits (66), Expect = 3.7 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = +3 Query: 147 DTRRPNTLIKNILGSTHAKRSVIVRYQI*PMYAYDSK***VQQLQLYWTMER*KVLGAQL 326 D RP+T ++ ++G + A DSK + L+ TME+ K+LG + Sbjct: 413 DANRPSTTVRYVMGRNPTD-----------LLAIDSKTA-IITLRNKVTMEQYKILGGKY 460 Query: 327 AGMTLSATSVL----PDSLVMRMEKGAWR 401 G LS L ++V+ +E G W+ Sbjct: 461 QGTILSIDDALQRTCTGTIVINLENGGWK 489
>YIBL_AZOVI (P96194) Putative HTH-type transcriptional regulator in ibpB-leuC| intergenic region Length = 144 Score = 29.6 bits (65), Expect = 4.9 Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 15/50 (30%) Frame = -1 Query: 435 GDQSGGWTPATAS-----RRPSPCASPTSPARRW----------WPTRSS 331 GD SG T AT+ R P CA +P RRW WPTR S Sbjct: 87 GDVSGRLTLATSHHIGLHRLPPCCAPSPAPIRRWRWTSASSIRKWPTRRS 136
>STK19_HUMAN (P49842) Serine/threonine-protein kinase 19 (EC 2.7.11.1) (Protein| RP1) (Protein G11) Length = 368 Score = 29.6 bits (65), Expect = 4.9 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -1 Query: 477 WRPTPVRGRRCASRGDQSGGWTPATASRRPSPCASPTSPARRW 349 WR P+RGRR A G G TP R C++P P R+ Sbjct: 56 WRE-PIRGRRGARPGGGDAGGTPGETVRH---CSAPEDPIFRF 94
>MSX1_CHICK (P28361) Homeobox protein MSX-1 (Msh homeobox 1-like protein)| (CHOX-7) Length = 249 Score = 29.6 bits (65), Expect = 4.9 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -1 Query: 489 RWTSWRPTPVRGRRCASRGDQSGGWTPATASRRPSPCASPTSPARRWWPTR 337 RW PT RGR+ SRG ++ P+ R +P+RR P R Sbjct: 21 RWKGSWPTAERGRQRRSRGFRAPSRRPSQPRRSDDGGTDVAAPSRRPLPVR 71
>GHRHR_MOUSE (P32082) Growth hormone-releasing hormone receptor precursor (GHRH| receptor) (GRF receptor) (GRFR) Length = 423 Score = 29.3 bits (64), Expect = 6.4 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Frame = +1 Query: 271 SSFSCTGRWSGRRCWAPS----WPG*PC 342 +S C G W G CW P+ W PC Sbjct: 51 TSLGCPGTWDGLLCWPPTGSGQWVSLPC 78
>YUXG_BACSU (P40747) Hypothetical oxidoreductase yuxG (EC 1.-.-.-) (ORF2)| Length = 689 Score = 29.3 bits (64), Expect = 6.4 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +2 Query: 299 AVEGAGRPVGRDDLVGHQRLAGLVGDAHGEGRLEAV 406 A EG V ++ G Q++AG + DA+G+GR AV Sbjct: 448 AAEGGHVIVADLNIEGAQKIAGEINDAYGKGRAMAV 483
>SCEL_MOUSE (Q9EQG3) Sciellin| Length = 652 Score = 29.3 bits (64), Expect = 6.4 Identities = 17/55 (30%), Positives = 22/55 (40%) Frame = -1 Query: 480 SWRPTPVRGRRCASRGDQSGGWTPATASRRPSPCASPTSPARRWWPTRSSRPTGR 316 SW P P G + P+TA+ R P P P + P S +P GR Sbjct: 137 SWFPPPPPGHNAS----------PSTAASRRDPALHPPLPPKPCSPIASPKPLGR 181
>MURD_SHEVI (Q9F1N2) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 449 Score = 28.9 bits (63), Expect = 8.3 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = -2 Query: 329 GQLGAQHLLPLHRPVQLKLLNSSSFGIICIHWLDLVSYYHGSFCMGTTEDVFD 171 G +G L L +PV L +L SSF + H L+ +S + C+ +ED D Sbjct: 142 GNIGIPVLDLLQKPVDLYILELSSFQLETTHSLNCIS----ATCLNISEDHMD 190
>LARG2_CHICK (Q66PG4) Glycosyltransferase-like protein LARGE2 (EC 2.4.-.-)| (Glycosyltransferase-like 1B) Length = 739 Score = 28.9 bits (63), Expect = 8.3 Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 1/23 (4%) Frame = -1 Query: 120 LEYVGGLWRRGTFACA-LPRPPS 55 LEY G L RR F CA LP PPS Sbjct: 388 LEYDGNLLRRELFGCASLPSPPS 410
>RAV1_YEAST (P47104) Regulator of V-ATPase in vacuolar membrane protein 1| (Suppression of the onset of impotence protein 3) Length = 1357 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/53 (22%), Positives = 26/53 (49%) Frame = -3 Query: 505 DGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLV 347 DG+ + + +G W P + + G RL + + ++P + +E GK ++ Sbjct: 397 DGEALLTTSRFSENGVWYPQKLNHGVSLRLQNTIQTESPIKFAVVHELGKQVI 449
>GRK_DROME (P42287) Protein gurken precursor| Length = 295 Score = 28.9 bits (63), Expect = 8.3 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Frame = +1 Query: 151 PDDPTP*SKTSSVVPMQND--------P**YDTKSSQCM-------HMIPNDDEFSSFSC 285 P DP+ S S P ND P +S C+ H + N+ F S C Sbjct: 155 PPDPSSSSTPDSTTPSPNDKETEIQMLPCSEAYNTSFCLNGGHCFQHPMVNNTVFHSCLC 214 Query: 286 TGRWSGRRCWAPSWPG 333 + G RC SW G Sbjct: 215 VNDYDGERCAYKSWNG 230
>Y4YB_RHISN (P55710) Hypothetical 17.1 kDa protein y4yB| Length = 154 Score = 28.9 bits (63), Expect = 8.3 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = -3 Query: 499 DVVQVDLMEANSGTWT-PMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPAN 323 D ++ +++A G+WT P+ +++ +D HRL +R+T L D V + Sbjct: 35 DALKAQILQA--GSWTAPITAEKDALFVIDDYHRLTVAHRLRLTRMPVVLLDNDSVRVES 92 Query: 322 WAP 314 W P Sbjct: 93 WRP 95 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,639,673 Number of Sequences: 219361 Number of extensions: 1465363 Number of successful extensions: 4964 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 4695 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4947 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
