ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017479.1| Zea mays clone EL01N0408G09.c mRNA sequence 289 4e-75
2gb|AY107290.1| Zea mays PCO063868 mRNA sequence 289 4e-75
3dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
4dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 4e-60
5ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA 232 9e-58
6dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 9e-58
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 224 2e-55
9emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 224 2e-55
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
11dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
12dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
13gb|DQ284493.1| Solanum tuberosum clone 050G10 transcription fact... 56 1e-04
14ref|NM_101815.2| Arabidopsis thaliana unknown protein AT1G19580 ... 48 0.028
15gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genom... 48 0.028
16gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana... 48 0.028
17gb|AY085025.1| Arabidopsis thaliana clone 12477 mRNA, complete s... 48 0.028
18dbj|AK176887.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 48 0.028
19dbj|AK176844.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 48 0.028
20dbj|AK175388.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 48 0.028
21ref|XM_641097.1| Dictyostelium discoideum hypothetical protein (... 42 1.7
22gb|U80439.1| Caenorhabditis elegans cosmid C01G8, complete sequence 42 1.7
23gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete se... 42 1.7
24gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.7
25gb|AY118759.1| Drosophila melanogaster GH09073 full insert cDNA 42 1.7
26ref|NM_135145.1| Drosophila melanogaster CG9144-RA (CG9144), mRNA 42 1.7
27gb|AC067903.13| Homo sapiens, clone RP11-740O11, complete sequence 42 1.7
28gb|AC022605.7| Homo sapiens, clone RP11-154E16, complete sequence 42 1.7
29gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, r... 42 1.7
30ref|NM_059155.3| Caenorhabditis elegans human CLN (neuronal cero... 42 1.7
31gb|AF326786.1| Caenorhabditis elegans CLN-3.2 (cln-3.2) mRNA, co... 42 1.7
32gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21... 42 1.7
33gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s... 42 1.7
34dbj|AP004713.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.7
35ref|XM_516791.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 6.8
36ref|NM_019001.2| Homo sapiens 5'-3' exoribonuclease 1 (XRN1), mRNA 40 6.8
37gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence 40 6.8
38gb|AF254983.3| Homo sapiens chromosome 21 clone RP11-589M2 map p... 40 6.8
39gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome... 40 6.8
40gb|AC114008.5| Mus musculus BAC clone RP23-198A16 from chromosom... 40 6.8
41gb|AY137776.1| Homo sapiens DNA strand-exchange protein SEP1 mRN... 40 6.8
42ref|XM_862211.1| PREDICTED: Canis familiaris similar to hect dom... 40 6.8
43ref|XM_536160.2| PREDICTED: Canis familiaris similar to hect dom... 40 6.8
44emb|AL672311.26| Human DNA sequence from clone RP13-167H21 on ch... 40 6.8
45emb|BX034204.1|CNS08YK0 Single read from an extremity of a full-... 40 6.8
46emb|AL163201.2|HS21C001 Homo sapiens chromosome 21 segment HS21C001 40 6.8
47gb|AC164573.5| Mus musculus 10 BAC RP24-221D13 (Roswell Park Can... 40 6.8
48emb|CR627396.1| Homo sapiens mRNA; cDNA DKFZp686F19113 (from clo... 40 6.8
49emb|CR749518.1| Homo sapiens mRNA; cDNA DKFZp686B22225 (from clo... 40 6.8
50gb|AC023508.16| Homo sapiens 3 BAC RP11-18O13 (Roswell Park Canc... 40 6.8
51gb|AC153507.11| Mus musculus 10 BAC RP23-411J14 (Roswell Park Ca... 40 6.8
52emb|BX640905.1|HSM807042 Homo sapiens mRNA; cDNA DKFZp686L17106 ... 40 6.8
53dbj|AP003900.1| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 6.8
54gb|AC152181.1| Mus musculus BAC clone RP24-321P19 from 15, compl... 40 6.8
55emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on ch... 40 6.8
56emb|AL133623.1|HSM801490 Homo sapiens mRNA; cDNA DKFZp434P0721 (... 40 6.8
57emb|AL078472.3|HSB11L7C8 Homo sapiens chromosome 21 BAC B11L7C8,... 40 6.8 
>gb|BT017479.1| Zea mays clone EL01N0408G09.c mRNA sequence
          Length = 1166

 Score =  289 bits (146), Expect = 4e-75
 Identities = 251/286 (87%)
 Strand = Plus / Minus

                                                                       
Query: 220 ttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactattccg 279
           |||| |||||||||||||||||| ||||||||||| ||||||||||| ||||| |  || 
Sbjct: 780 ttgtgtgggaggatgttgtcgggaaggatgagctggggcgggatctcgcggaccacccca 721

                                                                       
Query: 280 agcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcgagc 339
           ||||| ||||||||||||||||||||||| ||  |||||||||||| | |||||||||||
Sbjct: 720 agcatcgagtcgtactcctcgtctttgtgcgcgtacttcttcctcagcatcttctcgagc 661

                                                                       
Query: 340 tcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatgtag 399
           ||||||||||||||||||||||  ||||| |  ||||| || || |||| |||||| |||
Sbjct: 660 tcaatctcgtcgaagctcttggcgttctcggctgcatggacctgggctaggttgatatag 601

                                                                       
Query: 400 ttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaacttg 459
           |||| ||| ||||| |||||||| |  |||||||| ||||| ||||||||||||||||||
Sbjct: 600 ttggttgctgattgagcgatgaacgcaatctcctcttctgtaagcttccttaggaacttg 541

                                                         
Query: 460 gcaggattaccaacccagacctccccagaaggaatcctcgtattct 505
           ||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 540 gcaggattaccgacccagacctctccagaaggaatccttgtattct 495



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 51/59 (86%), Gaps = 5/59 (8%)
 Strand = Plus / Minus

                                                                      
Query: 58  cgatcctacaacagcgctcgacccaaaatcttattggg---catgaaaaaacagagaac 113
           |||||||| ||||| |||||||||  ||||||||||||   ||| ||||||||||||||
Sbjct: 925 cgatcctaaaacagtgctcgaccc--aatcttattgggcttcataaaaaaacagagaac 869
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>gb|AY107290.1| Zea mays PCO063868 mRNA sequence
          Length = 1381

 Score =  289 bits (146), Expect = 4e-75
 Identities = 251/286 (87%)
 Strand = Plus / Minus

                                                                       
Query: 220 ttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactattccg 279
           |||| |||||||||||||||||| ||||||||||| ||||||||||| ||||| |  || 
Sbjct: 968 ttgtgtgggaggatgttgtcgggaaggatgagctggggcgggatctcgcggaccacccca 909

                                                                       
Query: 280 agcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcgagc 339
           ||||| ||||||||||||||||||||||| ||  |||||||||||| | |||||||||||
Sbjct: 908 agcatcgagtcgtactcctcgtctttgtgcgcgtacttcttcctcagcatcttctcgagc 849

                                                                       
Query: 340 tcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatgtag 399
           ||||||||||||||||||||||  ||||| |  ||||| || || |||| |||||| |||
Sbjct: 848 tcaatctcgtcgaagctcttggcgttctcggctgcatggacctgggctaggttgatatag 789

                                                                       
Query: 400 ttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaacttg 459
           |||| ||| ||||| |||||||| |  |||||||| ||||| ||||||||||||||||||
Sbjct: 788 ttggttgctgattgagcgatgaacgcaatctcctcttctgtaagcttccttaggaacttg 729

                                                         
Query: 460 gcaggattaccaacccagacctccccagaaggaatcctcgtattct 505
           ||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 728 gcaggattaccgacccagacctctccagaaggaatccttgtattct 683



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/43 (90%), Gaps = 2/43 (4%)
 Strand = Plus / Minus

                                                       
Query: 54   cggtcgatcctacaacagcgctcgacccaaaatcttattgggc 96
            |||||||||||| ||||| |||||||||  |||||||||||||
Sbjct: 1118 cggtcgatcctaaaacagtgctcgaccc--aatcttattgggc 1078
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>dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150M03, full
           insert sequence
          Length = 1238

 Score =  248 bits (125), Expect = 2e-62
 Identities = 242/281 (86%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
           ||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| |  
Sbjct: 972 gccttgtttgggaggatgttgtccgggaggatgagctccggcgggatctcacggaccacg 913

                                                                       
Query: 277 ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
           |||||||| || || ||||||||||||||||| ||| |||| ||||||| | ||||||||
Sbjct: 912 ccgagcatcgaatcatactcctcgtctttgtgggcatactttttcctcagcatcttctcg 853

                                                                       
Query: 337 agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
           ||||| |||||||||||| ||||||||||||| |  ||||| ||||| || |  ||||||
Sbjct: 852 agctcgatctcgtcgaaggtcttggaattctcggcagcatggacttgggccagattgatg 793

                                                                       
Query: 397 tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
           ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 792 tagttcgttgctgactgagcaatgaacgctatctcctcttcagtaagctttcttaggaac 733

                                                    
Query: 457 ttggcaggattaccaacccagacctccccagaaggaatcct 497
           |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 732 ttggcaggattaccgacccagacctctccagaaggaatcct 692



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 19   ctcttcattgcaatgtgaaagagagatactgtatacggtcgatcctacaacagcgctcga 78
            |||||||||| ||||  |||||||| ||||||||| ||||||||||| ||||  ||||||
Sbjct: 1178 ctcttcattgtaatgc-aaagagaggtactgtatatggtcgatcctaaaacaatgctcga 1120

                                      
Query: 79   cccaaaatcttattgggcatgaaaaa 104
            |||||| ||||||||||| |||||||
Sbjct: 1119 cccaaattcttattgggcttgaaaaa 1094
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>dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D04, full
           insert sequence
          Length = 1195

 Score =  240 bits (121), Expect = 4e-60
 Identities = 241/281 (85%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
           ||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| |  
Sbjct: 974 gccttgtttgggaggatgttgtccgggaggatgagctccggcgggatctcacggaccacg 915

                                                                       
Query: 277 ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
           |||||||| || || ||||||||||||||||| ||| |||| ||||||| | ||||||||
Sbjct: 914 ccgagcatcgaatcatactcctcgtctttgtgggcatactttttcctcagcatcttctcg 855

                                                                       
Query: 337 agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
           ||||| |||||||||||| ||||||||||||| |  ||||| ||||| || |  ||||||
Sbjct: 854 agctcgatctcgtcgaaggtcttggaattctcggcagcatggacttgggccagattgatg 795

                                                                       
Query: 397 tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
           ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 794 tagttcgttgctgactgagcaatgaacgctatctcctcttcagtaagctttcttaggaac 735

                                                    
Query: 457 ttggcaggattaccaacccagacctccccagaaggaatcct 497
           ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 734 ttggcaggactaccgacccagacctctccagaaggaatcct 694



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 19   ctcttcattgcaatgtgaaagagagatactgtatacggtcgatcctacaacagcgctcga 78
            |||||||||| ||||  |||||||| ||||||||| ||||||||||| ||||  ||||||
Sbjct: 1180 ctcttcattgtaatgc-aaagagaggtactgtatatggtcgatcctaaaacaatgctcga 1122

                                      
Query: 79   cccaaaatcttattgggcatgaaaaa 104
            |||||| ||||||||||| |||||||
Sbjct: 1121 cccaaattcttattgggcttgaaaaa 1096
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>ref|XM_479312.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1155

 Score =  232 bits (117), Expect = 9e-58
 Identities = 240/281 (85%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
           ||||||| |||||||||  |||| |||||||| ||||  || |||||||||||||| |  
Sbjct: 882 gccttgtttgggaggatactgtccgggaggataagctctggtgggatctcacggaccacg 823

                                                                       
Query: 277 ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
           |||||||| || |||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 822 ccgagcatcgaatcgtactcctcgtctttgtgcgcaaacttcttcctcagcatcttctcg 763

                                                                       
Query: 337 agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
           ||||||||||| |||||| |||||| |||||| |  || || |||||||| || ||||| 
Sbjct: 762 agctcaatctcatcgaaggtcttggcattctcggctgcgtggacttgagccaaattgata 703

                                                                       
Query: 397 tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
           ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 702 tagtttgttgctgactgtgcaatgaacgccatctcctcttcagtaagctttcttaggaac 643

                                                    
Query: 457 ttggcaggattaccaacccagacctccccagaaggaatcct 497
           |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 642 ttggcaggattaccaacccagacctctccagaaggaatcct 602
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>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full
           insert sequence
          Length = 1155

 Score =  232 bits (117), Expect = 9e-58
 Identities = 240/281 (85%)
 Strand = Plus / Minus

                                                                       
Query: 217 gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
           ||||||| |||||||||  |||| |||||||| ||||  || |||||||||||||| |  
Sbjct: 882 gccttgtttgggaggatactgtccgggaggataagctctggtgggatctcacggaccacg 823

                                                                       
Query: 277 ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
           |||||||| || |||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 822 ccgagcatcgaatcgtactcctcgtctttgtgcgcaaacttcttcctcagcatcttctcg 763

                                                                       
Query: 337 agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
           ||||||||||| |||||| |||||| |||||| |  || || |||||||| || ||||| 
Sbjct: 762 agctcaatctcatcgaaggtcttggcattctcggctgcgtggacttgagccaaattgata 703

                                                                       
Query: 397 tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
           ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 702 tagtttgttgctgactgtgcaatgaacgccatctcctcttcagtaagctttcttaggaac 643

                                                    
Query: 457 ttggcaggattaccaacccagacctccccagaaggaatcct 497
           |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 642 ttggcaggattaccaacccagacctctccagaaggaatcct 602
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  224 bits (113), Expect = 2e-55
 Identities = 227/265 (85%)
 Strand = Plus / Minus

                                                                           
Query: 217     gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
               ||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| |  
Sbjct: 3551380 gccttgtttgggaggatgttgtccgggaggatgagctccggcgggatctcacggaccacg 3551321

                                                                           
Query: 277     ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
               |||||||| || || ||||||||||||||||| ||| |||| ||||||| | ||||||||
Sbjct: 3551320 ccgagcatcgaatcatactcctcgtctttgtgggcatactttttcctcagcatcttctcg 3551261

                                                                           
Query: 337     agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
               ||||| |||||||||||| ||||||||||||| |  ||||| ||||| || |  ||||||
Sbjct: 3551260 agctcgatctcgtcgaaggtcttggaattctcggcagcatggacttgggccagattgatg 3551201

                                                                           
Query: 397     tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
               ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 3551200 tagttcgttgctgactgagcaatgaacgctatctcctcttcagtaagctttcttaggaac 3551141

                                        
Query: 457     ttggcaggattaccaacccagacct 481
               |||||||||||||| ||||||||||
Sbjct: 3551140 ttggcaggattaccgacccagacct 3551116



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                           
Query: 19      ctcttcattgcaatgtgaaagagagatactgtatacggtcgatcctacaacagcgctcga 78
               |||||||||| ||||  |||||||| ||||||||| ||||||||||| ||||  ||||||
Sbjct: 3551586 ctcttcattgtaatgc-aaagagaggtactgtatatggtcgatcctaaaacaatgctcga 3551528

                                         
Query: 79      cccaaaatcttattgggcatgaaaaa 104
               |||||| ||||||||||| |||||||
Sbjct: 3551527 cccaaattcttattgggcttgaaaaa 3551502
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  224 bits (113), Expect = 2e-55
 Identities = 227/265 (85%)
 Strand = Plus / Minus

                                                                           
Query: 217     gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
               ||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| |  
Sbjct: 3551325 gccttgtttgggaggatgttgtccgggaggatgagctccggcgggatctcacggaccacg 3551266

                                                                           
Query: 277     ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
               |||||||| || || ||||||||||||||||| ||| |||| ||||||| | ||||||||
Sbjct: 3551265 ccgagcatcgaatcatactcctcgtctttgtgggcatactttttcctcagcatcttctcg 3551206

                                                                           
Query: 337     agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
               ||||| |||||||||||| ||||||||||||| |  ||||| ||||| || |  ||||||
Sbjct: 3551205 agctcgatctcgtcgaaggtcttggaattctcggcagcatggacttgggccagattgatg 3551146

                                                                           
Query: 397     tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
               ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 3551145 tagttcgttgctgactgagcaatgaacgctatctcctcttcagtaagctttcttaggaac 3551086

                                        
Query: 457     ttggcaggattaccaacccagacct 481
               |||||||||||||| ||||||||||
Sbjct: 3551085 ttggcaggattaccgacccagacct 3551061



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                           
Query: 19      ctcttcattgcaatgtgaaagagagatactgtatacggtcgatcctacaacagcgctcga 78
               |||||||||| ||||  |||||||| ||||||||| ||||||||||| ||||  ||||||
Sbjct: 3551531 ctcttcattgtaatgc-aaagagaggtactgtatatggtcgatcctaaaacaatgctcga 3551473

                                         
Query: 79      cccaaaatcttattgggcatgaaaaa 104
               |||||| ||||||||||| |||||||
Sbjct: 3551472 cccaaattcttattgggcttgaaaaa 3551447
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>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score =  224 bits (113), Expect = 2e-55
 Identities = 227/265 (85%)
 Strand = Plus / Minus

                                                                         
Query: 217   gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
             ||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| |  
Sbjct: 66308 gccttgtttgggaggatgttgtccgggaggatgagctccggcgggatctcacggaccacg 66249

                                                                         
Query: 277   ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
             |||||||| || || ||||||||||||||||| ||| |||| ||||||| | ||||||||
Sbjct: 66248 ccgagcatcgaatcatactcctcgtctttgtgggcatactttttcctcagcatcttctcg 66189

                                                                         
Query: 337   agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
             ||||| |||||||||||| ||||||||||||| |  ||||| ||||| || |  ||||||
Sbjct: 66188 agctcgatctcgtcgaaggtcttggaattctcggcagcatggacttgggccagattgatg 66129

                                                                         
Query: 397   tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
             ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 66128 tagttcgttgctgactgagcaatgaacgctatctcctcttcagtaagctttcttaggaac 66069

                                      
Query: 457   ttggcaggattaccaacccagacct 481
             |||||||||||||| ||||||||||
Sbjct: 66068 ttggcaggattaccgacccagacct 66044



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                         
Query: 19    ctcttcattgcaatgtgaaagagagatactgtatacggtcgatcctacaacagcgctcga 78
             |||||||||| ||||  |||||||| ||||||||| ||||||||||| ||||  ||||||
Sbjct: 66514 ctcttcattgtaatgc-aaagagaggtactgtatatggtcgatcctaaaacaatgctcga 66456

                                       
Query: 79    cccaaaatcttattgggcatgaaaaa 104
             |||||| ||||||||||| |||||||
Sbjct: 66455 cccaaattcttattgggcttgaaaaa 66430
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  208 bits (105), Expect = 1e-50
 Identities = 225/265 (84%)
 Strand = Plus / Plus

                                                                            
Query: 217      gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
                ||||||| |||||||||  |||| |||||||| ||||  || |||||||||||||| |  
Sbjct: 26722103 gccttgtttgggaggatactgtccgggaggataagctctggtgggatctcacggaccacg 26722162

                                                                            
Query: 277      ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
                |||||||| || |||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 26722163 ccgagcatcgaatcgtactcctcgtctttgtgcgcaaacttcttcctcagcatcttctcg 26722222

                                                                            
Query: 337      agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
                ||||||||||| |||||| |||||| |||||| |  || || |||||||| || ||||| 
Sbjct: 26722223 agctcaatctcatcgaaggtcttggcattctcggctgcgtggacttgagccaaattgata 26722282

                                                                            
Query: 397      tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
                ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 26722283 tagtttgttgctgactgtgcaatgaacgccatctcctcttcagtaagctttcttaggaac 26722342

                                         
Query: 457      ttggcaggattaccaacccagacct 481
                |||||||||||||||||||||||||
Sbjct: 26722343 ttggcaggattaccaacccagacct 26722367
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>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1003_C06
          Length = 143168

 Score =  208 bits (105), Expect = 1e-50
 Identities = 225/265 (84%)
 Strand = Plus / Plus

                                                                         
Query: 217   gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
             ||||||| |||||||||  |||| |||||||| ||||  || |||||||||||||| |  
Sbjct: 68960 gccttgtttgggaggatactgtccgggaggataagctctggtgggatctcacggaccacg 69019

                                                                         
Query: 277   ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
             |||||||| || |||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 69020 ccgagcatcgaatcgtactcctcgtctttgtgcgcaaacttcttcctcagcatcttctcg 69079

                                                                         
Query: 337   agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
             ||||||||||| |||||| |||||| |||||| |  || || |||||||| || ||||| 
Sbjct: 69080 agctcaatctcatcgaaggtcttggcattctcggctgcgtggacttgagccaaattgata 69139

                                                                         
Query: 397   tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
             ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 69140 tagtttgttgctgactgtgcaatgaacgccatctcctcttcagtaagctttcttaggaac 69199

                                      
Query: 457   ttggcaggattaccaacccagacct 481
             |||||||||||||||||||||||||
Sbjct: 69200 ttggcaggattaccaacccagacct 69224
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>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0524G08
          Length = 146690

 Score =  208 bits (105), Expect = 1e-50
 Identities = 225/265 (84%)
 Strand = Plus / Plus

                                                                          
Query: 217    gccttgtctgggaggatgttgtcggggaggatgagctgcggcgggatctcacggactatt 276
              ||||||| |||||||||  |||| |||||||| ||||  || |||||||||||||| |  
Sbjct: 139707 gccttgtttgggaggatactgtccgggaggataagctctggtgggatctcacggaccacg 139766

                                                                          
Query: 277    ccgagcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaacttcttctcg 336
              |||||||| || |||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 139767 ccgagcatcgaatcgtactcctcgtctttgtgcgcaaacttcttcctcagcatcttctcg 139826

                                                                          
Query: 337    agctcaatctcgtcgaagctcttggaattctcagtggcatgaacttgagctaagttgatg 396
              ||||||||||| |||||| |||||| |||||| |  || || |||||||| || ||||| 
Sbjct: 139827 agctcaatctcatcgaaggtcttggcattctcggctgcgtggacttgagccaaattgata 139886

                                                                          
Query: 397    tagttggctgccgattgggcgatgaatgtgatctcctcctctgtcagcttccttaggaac 456
              ||||| | ||| || || || ||||| |  |||||||| || || ||||| |||||||||
Sbjct: 139887 tagtttgttgctgactgtgcaatgaacgccatctcctcttcagtaagctttcttaggaac 139946

                                       
Query: 457    ttggcaggattaccaacccagacct 481
              |||||||||||||||||||||||||
Sbjct: 139947 ttggcaggattaccaacccagacct 139971
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>gb|DQ284493.1| Solanum tuberosum clone 050G10 transcription factor APFI-like mRNA,
           complete cds
          Length = 1260

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 280 agcatagagtcgtactcctcgtctttgtgagcaaacttcttcctcaac 327
           |||||||| || ||||||||||||||| ||||||| ||||||| ||||
Sbjct: 738 agcatagaatcatactcctcgtctttgcgagcaaatttcttccgcaac 691



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 473 cccagacctccccagaaggaatcctcgtattct 505
           |||||||||| ||| ||||||||||||||||||
Sbjct: 545 cccagacctctccacaaggaatcctcgtattct 513
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>ref|NM_101815.2| Arabidopsis thaliana unknown protein AT1G19580 mRNA, complete cds
          Length = 1357

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 271 actattccgagcatagagtcgtactcctcgtc 302
           |||||||||||||| ||||| |||||||||||
Sbjct: 920 actattccgagcattgagtcatactcctcgtc 889
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>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete
             sequence
          Length = 90341

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 271   actattccgagcatagagtcgtactcctcgtc 302
             |||||||||||||| ||||| |||||||||||
Sbjct: 85440 actattccgagcattgagtcatactcctcgtc 85471
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>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I,
              complete sequence
          Length = 120977

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 271    actattccgagcatagagtcgtactcctcgtc 302
              |||||||||||||| ||||| |||||||||||
Sbjct: 110206 actattccgagcattgagtcatactcctcgtc 110175
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>gb|AY085025.1| Arabidopsis thaliana clone 12477 mRNA, complete sequence
          Length = 1337

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 271 actattccgagcatagagtcgtactcctcgtc 302
           |||||||||||||| ||||| |||||||||||
Sbjct: 922 actattccgagcattgagtcatactcctcgtc 891
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>dbj|AK176887.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-45-B01
          Length = 1131

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 271 actattccgagcatagagtcgtactcctcgtc 302
           |||||||||||||| ||||| |||||||||||
Sbjct: 806 actattccgagcattgagtcatactcctcgtc 775
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>dbj|AK176844.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-H22
          Length = 1293

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 271 actattccgagcatagagtcgtactcctcgtc 302
           |||||||||||||| ||||| |||||||||||
Sbjct: 864 actattccgagcattgagtcatactcctcgtc 833
to top
>dbj|AK175388.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-82-L07
          Length = 1158

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 271 actattccgagcatagagtcgtactcctcgtc 302
           |||||||||||||| ||||| |||||||||||
Sbjct: 833 actattccgagcattgagtcatactcctcgtc 802
to top
>ref|XM_641097.1| Dictyostelium discoideum hypothetical protein (DDB0190470), partial
            mRNA
          Length = 2271

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  aacttcttcctcaacttcttc 333
            |||||||||||||||||||||
Sbjct: 1767 aacttcttcctcaacttcttc 1747
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>gb|U80439.1| Caenorhabditis elegans cosmid C01G8, complete sequence
          Length = 38487

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 315  cttcttcctcaacttcttctc 335
            |||||||||||||||||||||
Sbjct: 4774 cttcttcctcaacttcttctc 4794
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>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence
          Length = 89884

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 103   aaacagagaacaagaccaaaa 123
             |||||||||||||||||||||
Sbjct: 83119 aaacagagaacaagaccaaaa 83139
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 310     gcaaacttcttcctcaacttc 330
               |||||||||||||||||||||
Sbjct: 4137427 gcaaacttcttcctcaacttc 4137407
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>gb|AY118759.1| Drosophila melanogaster GH09073 full insert cDNA
          Length = 2271

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 282  catagagtcgtactcctcgtc 302
            |||||||||||||||||||||
Sbjct: 1356 catagagtcgtactcctcgtc 1336
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>ref|NM_135145.1| Drosophila melanogaster CG9144-RA (CG9144), mRNA
          Length = 2281

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 282  catagagtcgtactcctcgtc 302
            |||||||||||||||||||||
Sbjct: 1384 catagagtcgtactcctcgtc 1364
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>gb|AC067903.13| Homo sapiens, clone RP11-740O11, complete sequence
          Length = 198410

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 99    gaaaaaacagagaacaagaccaaaa 123
             ||||||| |||||||||||||||||
Sbjct: 75414 gaaaaaaaagagaacaagaccaaaa 75438
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>gb|AC022605.7| Homo sapiens, clone RP11-154E16, complete sequence
          Length = 168875

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 99     gaaaaaacagagaacaagaccaaaa 123
              ||||||| |||||||||||||||||
Sbjct: 143728 gaaaaaaaagagaacaagaccaaaa 143752
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>gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, region 25F-26A, BAC clone
             BACR10M11, complete sequence
          Length = 174832

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   catagagtcgtactcctcgtc 302
             |||||||||||||||||||||
Sbjct: 85904 catagagtcgtactcctcgtc 85884
to top
>ref|NM_059155.3| Caenorhabditis elegans human CLN (neuronal ceroid lipofuscinosis)
           related family member (cln-3.2) (cln-3.2) mRNA, complete
           cds
          Length = 1392

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 315 cttcttcctcaacttcttctc 335
           |||||||||||||||||||||
Sbjct: 728 cttcttcctcaacttcttctc 708
to top
>gb|AF326786.1| Caenorhabditis elegans CLN-3.2 (cln-3.2) mRNA, complete cds
          Length = 1419

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 315 cttcttcctcaacttcttctc 335
           |||||||||||||||||||||
Sbjct: 750 cttcttcctcaacttcttctc 730
to top
>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
              sequence
          Length = 260673

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 282    catagagtcgtactcctcgtc 302
              |||||||||||||||||||||
Sbjct: 108175 catagagtcgtactcctcgtc 108195
to top
>gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s DS06106 (D123), DS05973
             (D122), and DS08584 (D118)), complete sequence
          Length = 174311

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   catagagtcgtactcctcgtc 302
             |||||||||||||||||||||
Sbjct: 25616 catagagtcgtactcctcgtc 25596
to top
>dbj|AP004713.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1915B5, complete
             sequence
          Length = 145032

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 99    gaaaaaacagagaacaagaccaaaa 123
             ||||||| |||||||||||||||||
Sbjct: 93042 gaaaaaaaagagaacaagaccaaaa 93066
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>ref|XM_516791.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC460744), mRNA
          Length = 5298

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  atgaacttgagctaagttgatgta 398
            |||||||||||||| |||||||||
Sbjct: 3712 atgaacttgagctatgttgatgta 3689
to top
>ref|NM_019001.2| Homo sapiens 5'-3' exoribonuclease 1 (XRN1), mRNA
          Length = 10123

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  atgaacttgagctaagttgatgta 398
            |||||||||||||| |||||||||
Sbjct: 3674 atgaacttgagctatgttgatgta 3651
to top
>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence
          Length = 314335

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  cttcttctcgagctcaatct 346
            ||||||||||||||||||||
Sbjct: 6417 cttcttctcgagctcaatct 6436
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>gb|AF254983.3| Homo sapiens chromosome 21 clone RP11-589M2 map p11-q21.1, complete
              sequence
          Length = 190711

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    cttcttcctcaacttcttct 334
              ||||||||||||||||||||
Sbjct: 167786 cttcttcctcaacttcttct 167805
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>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence
          Length = 154695

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    gaaaaaacagagaacaagac 118
             ||||||||||||||||||||
Sbjct: 72655 gaaaaaacagagaacaagac 72636
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>gb|AC114008.5| Mus musculus BAC clone RP23-198A16 from chromosome 15, complete
            sequence
          Length = 202835

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 97   atgaaaaaacagagaacaagaccaaaacatac 128
            ||||| || ||||||||||||||| |||||||
Sbjct: 1420 atgaacaaccagagaacaagaccataacatac 1389
to top
>gb|AY137776.1| Homo sapiens DNA strand-exchange protein SEP1 mRNA, complete cds
          Length = 5121

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  atgaacttgagctaagttgatgta 398
            |||||||||||||| |||||||||
Sbjct: 3607 atgaacttgagctatgttgatgta 3584
to top
>ref|XM_862211.1| PREDICTED: Canis familiaris similar to hect domain and RLD 2,
            transcript variant 2 (LOC479005), mRNA
          Length = 7234

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  cttcctcaacttcttctcga 337
            ||||||||||||||||||||
Sbjct: 2440 cttcctcaacttcttctcga 2459
to top
>ref|XM_536160.2| PREDICTED: Canis familiaris similar to hect domain and RLD 2,
             transcript variant 1 (LOC479005), mRNA
          Length = 15266

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   cttcctcaacttcttctcga 337
             ||||||||||||||||||||
Sbjct: 10472 cttcctcaacttcttctcga 10491
to top
>emb|AL672311.26| Human DNA sequence from clone RP13-167H21 on chromosome X, complete
             sequence
          Length = 115998

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   cttcttcctcaacttcttct 334
             ||||||||||||||||||||
Sbjct: 56948 cttcttcctcaacttcttct 56967
to top
>emb|BX034204.1|CNS08YK0 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA50AB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 770

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 ctcaacttcttctcgagctc 341
           ||||||||||||||||||||
Sbjct: 322 ctcaacttcttctcgagctc 303
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>emb|AL163201.2|HS21C001 Homo sapiens chromosome 21 segment HS21C001
          Length = 281116

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    cttcttcctcaacttcttct 334
              ||||||||||||||||||||
Sbjct: 215922 cttcttcctcaacttcttct 215941
to top
>gb|AC164573.5| Mus musculus 10 BAC RP24-221D13 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 163890

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    ttattgggcatgaaaaaaca 107
             ||||||||||||||||||||
Sbjct: 32239 ttattgggcatgaaaaaaca 32258
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>emb|CR627396.1| Homo sapiens mRNA; cDNA DKFZp686F19113 (from clone DKFZp686F19113)
          Length = 5485

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  atgaacttgagctaagttgatgta 398
            |||||||||||||| |||||||||
Sbjct: 3677 atgaacttgagctatgttgatgta 3654
to top
>emb|CR749518.1| Homo sapiens mRNA; cDNA DKFZp686B22225 (from clone DKFZp686B22225)
          Length = 5399

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  atgaacttgagctaagttgatgta 398
            |||||||||||||| |||||||||
Sbjct: 3655 atgaacttgagctatgttgatgta 3632
to top
>gb|AC023508.16| Homo sapiens 3 BAC RP11-18O13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 136105

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 375   atgaacttgagctaagttgatgta 398
             |||||||||||||| |||||||||
Sbjct: 82088 atgaacttgagctatgttgatgta 82111
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>gb|AC153507.11| Mus musculus 10 BAC RP23-411J14 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190405

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    ttattgggcatgaaaaaaca 107
             ||||||||||||||||||||
Sbjct: 13349 ttattgggcatgaaaaaaca 13330
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>emb|BX640905.1|HSM807042 Homo sapiens mRNA; cDNA DKFZp686L17106 (from clone DKFZp686L17106);
            complete cds
          Length = 10123

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  atgaacttgagctaagttgatgta 398
            |||||||||||||| |||||||||
Sbjct: 3674 atgaacttgagctatgttgatgta 3651
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>dbj|AP003900.1| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-T171+S39,
             complete sequences
          Length = 85444

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   cttcttcctcaacttcttct 334
             ||||||||||||||||||||
Sbjct: 20235 cttcttcctcaacttcttct 20254
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>gb|AC152181.1| Mus musculus BAC clone RP24-321P19 from 15, complete sequence
          Length = 187733

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 97     atgaaaaaacagagaacaagaccaaaacatac 128
              ||||| || ||||||||||||||| |||||||
Sbjct: 177900 atgaacaaccagagaacaagaccataacatac 177869
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>emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on chromosome X, complete
             sequence
          Length = 227395

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   attgggcgatgaatgtgatc 429
             ||||||||||||||||||||
Sbjct: 77648 attgggcgatgaatgtgatc 77629
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>emb|AL133623.1|HSM801490 Homo sapiens mRNA; cDNA DKFZp434P0721 (from clone DKFZp434P0721);
            partial cds
          Length = 8281

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  atgaacttgagctaagttgatgta 398
            |||||||||||||| |||||||||
Sbjct: 2003 atgaacttgagctatgttgatgta 1980
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>emb|AL078472.3|HSB11L7C8 Homo sapiens chromosome 21 BAC B11L7C8, complete sequence
          Length = 75657

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   cttcttcctcaacttcttct 334
             ||||||||||||||||||||
Sbjct: 37966 cttcttcctcaacttcttct 37985


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,244,662
Number of Sequences: 3902068
Number of extensions: 4244662
Number of successful extensions: 85786
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85567
Number of HSP's gapped (non-prelim): 218
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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