>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -1

Query: 463 CGPLPKLHGVMRHGCKPYEHNLCHRGAPLESSCHQ 359
           CGPLP+LHGV+RHGCKPYEHN C  GAPL   CHQ
Sbjct: 298 CGPLPRLHGVIRHGCKPYEHNQCAGGAPL-GGCHQ 331

>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 30.8 bits (68), Expect(2) = 0.16
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +2

Query: 38  YMIHPDSRTRAHTHSLGEAHLQT-----VHTHTARTHL 136
           Y++HP +    HTH+    H+       +HTHT  THL
Sbjct: 55  YLLHPHTHVCTHTHTCTHTHIHASTHVCIHTHTF-THL 91



 Score = 22.3 bits (46), Expect(2) = 0.16
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 228 YTKPPSTVLRSSYTRTYAHENANTDRH 308
           +T   +  L  + TRTYAH  A T  H
Sbjct: 94  HTLTHALTLTCAPTRTYAHTRAPTHVH 120

>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC 3.6.1.-)|
          Length = 1401

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +2

Query: 62   TRAHTHSLGEAHLQTVHTHTARTHLYRLVVHKASSSQGPRLSGITTVPARYSTPL 226
            T  H+ +   A L T  ++  RTH Y++    +S +  P+ S +   P   S+PL
Sbjct: 1052 TTQHSSNQNPAGLTTKQSNLERTHSYKVPEKVSSGTNIPKKSAVMPSPGTSSSPL 1106

>GRIP2_HUMAN (Q9C0E4) Glutamate receptor-interacting protein 2 (GRIP2 protein)|
          Length = 1043

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = +3

Query: 147  SYTKLAALKDRACQAL-PQYQRGTPPH*YTKPPSTVLRSSYTRTYAHENANTDRHHSSYN 323
            SYT  AA +    Q   P + RG+PP      P+   R+SYT T A E+   +     + 
Sbjct: 801  SYTPQAAARGTTPQERRPGWLRGSPP------PTEPRRTSYTPTPADESFPEEEEGDDWE 854

Query: 324  VP--PSAGGEVAQSWWQL 371
             P  P+ G    + +W++
Sbjct: 855  PPTSPAPGPAREEGFWRM 872

>VP4_ROTBC (P08713) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 776

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
 Frame = -1

Query: 460 GPL---PKLHGVMRHGCKPYEHN 401
           GPL   PKL+GVM+HG K Y +N
Sbjct: 156 GPLLSTPKLYGVMKHGGKIYTYN 178

>CRVP_OPHHA (Q7ZT98) Ophanin precursor (Opharin)|
          Length = 239

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +3

Query: 258 SSYTRTYAHENANTDRHHS-SYNVPPSAGGEVAQSWWQLLSSGAPRWQRLCS*GLHP 425
           S  TR    +    D H+S   +V P+A   +   W+   +S A RW   C+ G  P
Sbjct: 24  SESTRRQKKQKEIVDLHNSLRRSVSPTASNMLKMQWYPEAASNAERWASNCNLGHSP 80

>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 23/75 (30%), Positives = 32/75 (42%)
 Frame = +3

Query: 234 KPPSTVLRSSYTRTYAHENANTDRHHSSYNVPPSAGGEVAQSWWQLLSSGAPRWQRLCS* 413
           +P S    S  + T+        RHH   N+PPS  G V +S    L++  P  +  CS 
Sbjct: 301 RPRSKSQSSGSSATHPISVPGARRHHHLVNLPPSQTGLVRRSRTDSLAATPPAAK--CS- 357

Query: 414 GLHPCRMTPCSLGSG 458
               CR+   S G G
Sbjct: 358 ---SCRVRTASEGDG 369

>CRVP1_NAJAT (Q7T1K6) Natrin-1 precursor (Cysteine-rich venom protein 1)|
           (NA-CRVP1) (Protein G2a)
          Length = 239

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +3

Query: 258 SSYTRTYAHENANTDRHHS-SYNVPPSAGGEVAQSWWQLLSSGAPRWQRLCS 410
           S  TR    +    D H+S    V P+A   +   W+   +S A RW   CS
Sbjct: 24  SESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCS 75

>VP4_NCDV (P17465) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 775

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 451 PKLHGVMRHGCKPYEHN 401
           PKL+GVM+HG K Y +N
Sbjct: 162 PKLYGVMKHGGKIYTYN 178

>RF2_THEMA (Q9X1R5) Peptide chain release factor 2 (RF-2)|
          Length = 369

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 288 NANTDRHHSSYNVPPSAGGEVAQSWWQLLSSGAPRW 395
           N   D +++  +V P AGG  +Q W Q+L     RW
Sbjct: 119 NGKYDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRW 154

>KHDR3_RAT (Q9JLP1) KH domain-containing, RNA binding, signal|
           transduction-associated protein 3 (Sam68-like mammalian
           protein 2) (SLM-2) (rSLM-2)
          Length = 346

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
 Frame = +3

Query: 207 RGTPPH*YTKPPSTVLRSSYTR-------TYAHENANTDRHHSSYNVPPSAGGE 347
           RG PP  Y  PP    + +Y         + A+++ + D + +SY+ P  +G +
Sbjct: 247 RGVPPTGYRPPPPPPTQETYGEYDYDDGYSTAYDDQSYDSYDNSYSTPAQSGAD 300

>DERM_BOVIN (P19427) Dermatopontin (Tyrosine-rich acidic matrix protein)|
           (TRAMP) (22 kDa extracellular matrix protein) (Dermatan
           sulfate proteoglycan-associated protein 22K)
          Length = 183

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 270 RTYAHENANTDRHHSSYNVP-PSAGGEVAQSWWQLLSSGAPRWQRLCS 410
           R+  ++   +DR  +   +P P + GE  + WW+ ++     W + CS
Sbjct: 42  RSIFNKKEGSDRQWNYACMPTPQSLGEPTECWWEEINRAGMEWYQTCS 89

>VP4_ROTSF (P17463) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 776

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 451 PKLHGVMRHGCKPYEHN 401
           PKL+GVM+HG K Y +N
Sbjct: 162 PKLYGVMKHGGKIYTYN 178

>VP4_ROTB5 (P36305) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 776

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 451 PKLHGVMRHGCKPYEHN 401
           PKL+GVM+HG K Y +N
Sbjct: 162 PKLYGVMKHGGKIYTYN 178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,981,197
Number of Sequences: 219361
Number of extensions: 1345029
Number of successful extensions: 3883
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3881
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)