ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart30d11 |
|---|---|
| Clone Library Name | barley_pub |
>PHT14_ARATH (Q96303) Inorganic phosphate transporter 1-4 (AtPht1;4) (H(+)/Pi| cotransporter) Length = 534 Score = 115 bits (288), Expect = 6e-26 Identities = 58/92 (63%), Positives = 69/92 (75%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GISAA+GKLGA+VG+FGFLYLAQN D K D GY GIGV+NSL +L NFLG+ FTF Sbjct: 443 GISAASGKLGAMVGAFGFLYLAQNPDKDKTDAGYPPGIGVRNSLIVLGVVNFLGILFTFL 502 Query: 294 APESNGISLEELSGENDDEAPAPATHARTVPV 199 PES G SLEE+SGEN+D + +RTVP+ Sbjct: 503 VPESKGKSLEEMSGENEDNENS-NNDSRTVPI 533
>PHT12_ARATH (Q96243) Inorganic phosphate transporter 1-2 (AtPht1;2) (H(+)/Pi| cotransporter) Length = 524 Score = 110 bits (274), Expect = 2e-24 Identities = 54/75 (72%), Positives = 59/75 (78%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GISAAAGK GAI+G+FGFLY AQNQD +KVD GY GIGVKNSL +L NF+GM FTF Sbjct: 442 GISAAAGKAGAIIGAFGFLYAAQNQDKAKVDAGYPPGIGVKNSLIVLGVLNFIGMLFTFL 501 Query: 294 APESNGISLEELSGE 250 PE G SLEELSGE Sbjct: 502 VPEPKGKSLEELSGE 516
>PHT17_ARATH (Q494P0) Inorganic phosphate transporter 1-7 (AtPht1;7) (H(+)/Pi| cotransporter) Length = 535 Score = 109 bits (272), Expect = 4e-24 Identities = 52/77 (67%), Positives = 61/77 (79%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GISAA+GKLGA+VG+FGFLYLAQ+ D +K +HGY GIGVKNSL +L N LGM FT Sbjct: 439 GISAASGKLGAMVGAFGFLYLAQSPDKTKTEHGYPPGIGVKNSLIVLGVVNLLGMVFTLL 498 Query: 294 APESNGISLEELSGEND 244 PES G SLEE+SGEN+ Sbjct: 499 VPESKGKSLEEMSGENE 515
>PHT11_ARATH (Q8VYM2) Inorganic phosphate transporter 1-1 (AtPht1;1) (H(+)/Pi| cotransporter) Length = 524 Score = 107 bits (268), Expect = 1e-23 Identities = 54/75 (72%), Positives = 59/75 (78%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GISAAAGK GAIVG+FGFLY AQ+QD +KVD GY GIGVKNSL +L NF+GM FTF Sbjct: 442 GISAAAGKAGAIVGAFGFLYAAQSQDKAKVDAGYPPGIGVKNSLIMLGVLNFIGMLFTFL 501 Query: 294 APESNGISLEELSGE 250 PE G SLEELSGE Sbjct: 502 VPEPKGKSLEELSGE 516
>PHT13_ARATH (O48639) Inorganic phosphate transporter 1-3 (AtPht1;3) (H(+)/Pi| cotransporter) Length = 521 Score = 103 bits (256), Expect = 3e-22 Identities = 52/75 (69%), Positives = 56/75 (74%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GISAA GK GAIVG+FGFLY AQ QD +K D GY GIGVKNSL +L NF+GM FTF Sbjct: 442 GISAATGKAGAIVGAFGFLYAAQPQDKTKTDAGYPPGIGVKNSLIMLGVINFVGMLFTFL 501 Query: 294 APESNGISLEELSGE 250 PE G SLEELSGE Sbjct: 502 VPEPKGKSLEELSGE 516
>PHT15_ARATH (Q8GYF4) Inorganic phosphate transporter 1-5 (AtPht1;5) (H(+)/Pi| cotransporter) Length = 542 Score = 102 bits (253), Expect = 7e-22 Identities = 51/90 (56%), Positives = 63/90 (70%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GISAA+GK GAIVG+FGFLY AQ+ D K D GY GIGV+NSL +LA NFLG+ FT Sbjct: 444 GISAASGKAGAIVGAFGFLYAAQSSDSEKTDAGYPPGIGVRNSLLMLACVNFLGIVFTLL 503 Query: 294 APESNGISLEELSGENDDEAPAPATHARTV 205 PES G SLEE+S E+++++ TV Sbjct: 504 VPESKGKSLEEISREDEEQSGGDTVVEMTV 533
>PHT16_ARATH (Q9ZWT3) Inorganic phosphate transporter 1-6 (AtPht1;6) (H(+)/Pi| cotransporter) Length = 516 Score = 72.4 bits (176), Expect = 6e-13 Identities = 39/79 (49%), Positives = 50/79 (63%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GISAA+GK GA+VGSFGF L + +G+ N+L+I+A N LG+ TF Sbjct: 443 GISAASGKAGAMVGSFGFSALVK-------------ALGMSNTLYIMAGINLLGLLLTFT 489 Query: 294 APESNGISLEELSGENDDE 238 PE+NG SLEELSGE + E Sbjct: 490 IPETNGKSLEELSGETEPE 508
>PHT18_ARATH (Q9SYQ1) Inorganic phosphate transporter 1-8 (AtPht1;8) (H(+)/Pi| cotransporter) Length = 534 Score = 46.6 bits (109), Expect = 3e-05 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFT-F 298 GIS AAGKLGAIVG+ GFL+ + + + Y ++ + IL G+ T F Sbjct: 432 GISGAAGKLGAIVGTVGFLWATKKMESDDKNQIYPEVNRMRIAFLILGGVCIAGILVTYF 491 Query: 297 CAPESNGISLEELSGENDDEA 235 E+ G SLEE + D+ A Sbjct: 492 FTKETMGRSLEENEHDQDNNA 512
>PHT19_ARATH (Q9S735) Inorganic phosphate transporter 1-9 (AtPht1;9) (H(+)/Pi| cotransporter) Length = 532 Score = 43.9 bits (102), Expect = 2e-04 Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GIS AAGK GAIVG+ GFL+ ++ + + G+ V+ + IL GM T+ Sbjct: 442 GISGAAGKFGAIVGTVGFLWATRHHE----EDGFPDVKRVRIAFLILGGVCIAGMIVTYL 497 Query: 294 -APESNGISLEELSGENDDEAPAPATHARTVPV*DVAVRQ 178 E+ G SLE EN+DE +T A + P ++ RQ Sbjct: 498 FTRETMGRSLE----ENEDE--IVSTSAGSSPANELLRRQ 531
>YHD1_SCHPO (Q9P6J9) Putative inorganic phosphate transporter C1683.01| Length = 573 Score = 39.3 bits (90), Expect = 0.005 Identities = 25/72 (34%), Positives = 35/72 (48%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 GISAA GK GAI+ S F +L + IG N ++I C + G+ FT Sbjct: 487 GISAALGKCGAILASLLFNFLT-------------SIIGYGNVMWIFCGCMWGGILFTLL 533 Query: 294 APESNGISLEEL 259 PE+ G +E+ Sbjct: 534 LPETKGRDADEI 545
>YBN1_SCHPO (O42885) Putative inorganic phosphate transporter C8E4.01c| Length = 572 Score = 38.9 bits (89), Expect = 0.007 Identities = 24/72 (33%), Positives = 34/72 (47%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 G+SAA GK GAI+ S F +L IG N ++I C + G+ FT Sbjct: 486 GVSAALGKCGAILASLLFNFLT-------------GVIGYGNVMWIFCGCMWGGILFTLL 532 Query: 294 APESNGISLEEL 259 PE+ G +E+ Sbjct: 533 LPETKGRDADEI 544
>PHO84_YEAST (P25297) Inorganic phosphate transporter PHO84| Length = 587 Score = 34.3 bits (77), Expect = 0.17 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDH-----GYKAGIGVKNSLFILAACNFLGM 310 GISAA+GK+GAI+ AQ + +DH G + + + I A LG+ Sbjct: 485 GISAASGKVGAII--------AQTALGTLIDHNCARDGKPTNCWLPHVMEIFALFMLLGI 536 Query: 309 AFTFCAPESNGISLEELSGENDDEAPAPAT 220 T PE+ +LEE++ DE PAT Sbjct: 537 FTTLLIPETKRKTLEEINELYHDEID-PAT 565
>YAEC_SCHPO (Q09852) Putative inorganic phosphate transporter C23D3.12| Length = 559 Score = 33.9 bits (76), Expect = 0.22 Identities = 23/75 (30%), Positives = 34/75 (45%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFC 295 G+SAA GK GAI+ S F +L + IG N ++I C + + FT Sbjct: 475 GLSAALGKCGAILASLLFNFLT-------------SVIGYGNVMWIFCGCMWGAIFFTLL 521 Query: 294 APESNGISLEELSGE 250 PE+ +E+ E Sbjct: 522 LPETKMRDADEIDRE 536
>TSN31_BRARE (Q7ZUB3) Tetraspanin-31 (Tspan-31) (Sarcoma amplified sequence| homolog) Length = 212 Score = 30.0 bits (66), Expect = 3.2 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +2 Query: 317 RKLQAARMNSEFLTPMPALYPWSTLLGSWFCARYRNPNDPTMAPS 451 + LQ + + L + + ++ +LG W RYRN DP PS Sbjct: 165 KMLQHSSEALKILGGVGLFFSFTEILGVWLAMRYRNQKDPRANPS 209
>TSN13_RAT (Q5FVL6) Tetraspanin-13 (Tspan-13) (Transmembrane 4 superfamily| member 13) Length = 204 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 350 FLTPMPALYPWSTLLGSWFCARYRNPNDPTMAPS 451 F+ + + ++ +LG W RYRN DP PS Sbjct: 168 FVGGIGLFFSFTEILGVWLTYRYRNQKDPRANPS 201
>TSN13_MOUSE (Q9D8C2) Tetraspanin-13 (Tspan-13) (Transmembrane 4 superfamily| member 13) Length = 204 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 350 FLTPMPALYPWSTLLGSWFCARYRNPNDPTMAPS 451 F+ + + ++ +LG W RYRN DP PS Sbjct: 168 FVGGIGLFFSFTEILGVWLTYRYRNQKDPRANPS 201
>TSN13_HUMAN (O95857) Tetraspanin-13 (Tspan-13) (Transmembrane 4 superfamily| member 13) (Tetraspan NET-6) Length = 204 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 350 FLTPMPALYPWSTLLGSWFCARYRNPNDPTMAPS 451 F+ + + ++ +LG W RYRN DP PS Sbjct: 168 FVGGIGLFFSFTEILGVWLTYRYRNQKDPRANPS 201
>TS31B_XENLA (Q7ZWW7) Tetraspanin-31 B (Tspan-31 B) (Sarcoma amplified sequence| homolog B) Length = 212 Score = 29.3 bits (64), Expect = 5.4 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 374 YPWSTLLGSWFCARYRNPNDPTMAPS 451 + ++ +LG W RYRN DP PS Sbjct: 184 FSFTEILGVWLAFRYRNQKDPRANPS 209
>GIT1_YEAST (P25346) Probable metabolite transport protein GIT1| Length = 518 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = -2 Query: 474 GISAAAGKLGAIVGSFGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTF 298 G+SA GK+G++VG F + N +G + + I A C +G+ T+ Sbjct: 403 GLSAVTGKIGSVVGVECFQPIRDN-------------LGARWTFIIAAICGLIGIIITY 448
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 28.9 bits (63), Expect = 7.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 50 HMTIVVLLLYSTPELNVPTKKKKTPIH 130 H+ IV LL+ +LN+P K TP+H Sbjct: 782 HVQIVKLLVQDGADLNIPDKDGDTPLH 808
>YICO_ECOLI (P31440) Inner membrane protein yicO| Length = 470 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -2 Query: 162 LPVVYSAGLDGCMGVFFFFVGTFNSGVEYNNNTTIVMCQSSPCYN*LIRVYGRF 1 +P+ G+ +G+F +G N+GV N T+VM + L+ + G F Sbjct: 167 IPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFF 220
>PDC_ZYMMO (P06672) Pyruvate decarboxylase (EC 4.1.1.1) (PDC)| Length = 568 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = -2 Query: 396 PSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFCAPESNGISLEELSGENDDEAPAPATH 217 P+K+DH K + K +++ ACN M CA +L + E DEA A Sbjct: 145 PAKIDHVIKTALREKKPVYLEIACNIASMP---CAAPGPASAL--FNDEASDEASLNAAV 199 Query: 216 ARTV 205 T+ Sbjct: 200 EETL 203
>SURF4_SCHPO (O74559) Surfeit locus protein 4 homolog| Length = 302 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -2 Query: 429 FGFLYLAQNQDPSKVDHGYKAGIGVKNSLFILAACNFLGMAFTFCAP 289 F + L+ NQD + + +G++ F AC F+ A TF AP Sbjct: 7 FSTIPLSMNQDSYQT----RTTVGIRKKTFSERACQFMEQAETFMAP 49
>SARM1_CAEEL (Q86DA5) Sterile alpha and TIR motif-containing protein tir-1| (Neuronal symmetry protein 2) (SARM1 homolog) Length = 1000 Score = 28.5 bits (62), Expect = 9.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 86 PELNVPTKKKKTPIHPSKPAEYTTGSIY 169 P ++VP K P P++PA T G +Y Sbjct: 110 PSISVPLPPKSAPPCPTQPAPLTNGDLY 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,291,883 Number of Sequences: 219361 Number of extensions: 1036486 Number of successful extensions: 3357 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3267 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3355 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
