ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
2dbj|AK069414.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
3gb|AY104874.1| Zea mays PCO128535 mRNA sequence 276 7e-71
4gb|BT024020.1| Zea mays clone EL01N0555A06 mRNA sequence 248 2e-62
5gb|U16254.1|ZMU16254 Zea mays dihydrolipoamide acetyl transferas... 188 1e-44
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
8emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb... 161 3e-36
9gb|AY108924.1| Zea mays PCO128534 mRNA sequence 141 3e-30
10gb|AC129351.6| Homo sapiens 12 BAC RP11-466G11 (Roswell Park Can... 44 0.45
11gb|AC158592.4| Mus musculus 10 BAC RP23-198D4 (Roswell Park Canc... 44 0.45
12gb|AC129675.6| Homo sapiens 12 BAC RP11-310A24 (Roswell Park Can... 44 0.45
13gb|AC159478.7| Mus musculus 10 BAC RP23-460F17 (Roswell Park Can... 44 0.45
14ref|NM_103166.2| Arabidopsis thaliana EMB3003; acyltransferase/ ... 42 1.8
15gb|BT001042.1| Arabidopsis thaliana At1g34430/F7P12_2 mRNA, comp... 42 1.8
16gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
17emb|AL355815.9| Human DNA sequence from clone RP3-453H5 on chrom... 42 1.8
18emb|BX571678.14| Zebrafish DNA sequence from clone DKEY-271J15 i... 42 1.8
19gb|AY128294.1| Arabidopsis thaliana At1g34430/F7P12_2 mRNA, comp... 42 1.8
20dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
22emb|BX815718.1|CNS0ACXH Arabidopsis thaliana Full-length cDNA Co... 42 1.8
23emb|BX816473.1|CNS0AD0L Arabidopsis thaliana Full-length cDNA Co... 42 1.8
24gb|AY084265.1| Arabidopsis thaliana clone 101686 mRNA, complete ... 42 1.8
25dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
26dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
27dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
28gb|AY111087.1| Zea mays CL10585_1 mRNA sequence 42 1.8
29gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
30gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 7.0
31gb|AC165177.2| Zea mays clone ZMMBBb-188L18, complete sequence 40 7.0
32gb|AY810465.1| Schistosoma japonicum SJCHGC06930 protein mRNA, p... 40 7.0
33gb|AY570737.1| Schistosoma japonicum egg protein CP1084 (CP1084)... 40 7.0
34gb|AY165512.1| Homo sapiens menage a trois 1 (CAK assembly facto... 40 7.0
35emb|AL158042.9| Human DNA sequence from clone RP11-103J8 on chro... 40 7.0
36gb|DQ366726.1| Uncultured Prochlorococcus marinus clone HF10-88F... 40 7.0
37emb|AL132822.15|HSJ1017F8 Human DNA sequence from clone RP5-1017... 40 7.0
38ref|XM_970504.1| PREDICTED: Tribolium castaneum similar to CG107... 40 7.0
39gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence 40 7.0
40emb|BX663513.13| Zebrafish DNA sequence from clone DKEY-234F12 i... 40 7.0
41dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
42gb|AC064834.5| Homo sapiens BAC clone RP11-666B15 from 2, comple... 40 7.0
43dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
44dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
45gb|AC007621.34| Homo sapiens 12 BAC RP11-757G14 (Roswell Park Ca... 40 7.0
46emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 40 7.0
47emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-3... 40 7.0
48dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.0
49dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone... 40 7.0 
>dbj|AK099737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090I09, full
            insert sequence
          Length = 1831

 Score =  317 bits (160), Expect = 2e-83
 Identities = 217/236 (91%)
 Strand = Plus / Minus

                                                                        
Query: 282  gtctagaacgtaaggtccttgggatcctcaattatcttggacagagtttgcagaaaggcg 341
            ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 1519 gtctaaaatgtaaggtccttgggatcctcaattatcttggaaagagtttgcagaaaagcg 1460

                                                                        
Query: 342  gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcatttggcac 401
            |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||  |
Sbjct: 1459 gcaagatcagctccgtaaataacccgatgatcagcagtaacattgacctgcatttggttc 1400

                                                                        
Query: 402  ttgatcccaattctaccatcttttgtaccaacaactgtcggttgtgatgcaccaacagcc 461
            ||||||||||| |||||||||||||||||||||| ||| ||||||||||  ||||| |||
Sbjct: 1399 ttgatcccaatactaccatcttttgtaccaacaagtgttggttgtgatgatccaacggcc 1340

                                                                    
Query: 462  atgattgctccagttccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
            |||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 1339 atgattgcaccagttccaggtggcaagattgcatcaaatctgtcaactccaaacat 1284
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>dbj|AK069414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018G17, full
           insert sequence
          Length = 890

 Score =  317 bits (160), Expect = 2e-83
 Identities = 217/236 (91%)
 Strand = Plus / Minus

                                                                       
Query: 282 gtctagaacgtaaggtccttgggatcctcaattatcttggacagagtttgcagaaaggcg 341
           ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 583 gtctaaaatgtaaggtccttgggatcctcaattatcttggaaagagtttgcagaaaagcg 524

                                                                       
Query: 342 gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcatttggcac 401
           |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||  |
Sbjct: 523 gcaagatcagctccgtaaataacccgatgatcagcagtaacattgacctgcatttggttc 464

                                                                       
Query: 402 ttgatcccaattctaccatcttttgtaccaacaactgtcggttgtgatgcaccaacagcc 461
           ||||||||||| |||||||||||||||||||||| ||| ||||||||||  ||||| |||
Sbjct: 463 ttgatcccaatactaccatcttttgtaccaacaagtgttggttgtgatgatccaacggcc 404

                                                                   
Query: 462 atgattgctccagttccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
           |||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 403 atgattgcaccagttccaggtggcaagattgcatcaaatctgtcaactccaaacat 348
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>gb|AY104874.1| Zea mays PCO128535 mRNA sequence
          Length = 1001

 Score =  276 bits (139), Expect = 7e-71
 Identities = 205/227 (90%)
 Strand = Plus / Minus

                                                                       
Query: 291 gtaaggtccttgggatcctcaattatcttggacagagtttgcagaaaggcggcaagatca 350
           ||||| ||||||||||||||||||||||| |  || ||||||||||| |||||||| |||
Sbjct: 628 gtaagatccttgggatcctcaattatcttagcaagtgtttgcagaaaagcggcaaggtca 569

                                                                       
Query: 351 gatccataaataacacgatgatcagcagtaacattgacctgcatttggcacttgatccca 410
           | |||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||| 
Sbjct: 568 gctccataaataacccgatgatcagcggtaacatttacctgcatttggctcttgatcccg 509

                                                                       
Query: 411 attctaccatcttttgtaccaacaactgtcggttgtgatgcaccaacagccatgattgct 470
           |||||||| ||||||||||||||||||||||||| ||||||||| || ||||||||||| 
Sbjct: 508 attctaccgtcttttgtaccaacaactgtcggttctgatgcaccgacggccatgattgcg 449

                                                          
Query: 471 ccagttccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
           ||||||||||||||||  || |||||||| |||||||||||||||||
Sbjct: 448 ccagttccaggtggcagtattgcatcgaacctatcaactccaaacat 402
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>gb|BT024020.1| Zea mays clone EL01N0555A06 mRNA sequence
          Length = 1898

 Score =  248 bits (125), Expect = 2e-62
 Identities = 233/269 (86%)
 Strand = Plus / Minus

                                                                        
Query: 249  tgattgtctcggggaaaaagaatcacttggtacgtctagaacgtaaggtccttgggatcc 308
            |||||| ||| |||||||| ||||| |||| || |  |||| ||||| ||||||||||||
Sbjct: 1582 tgattgcctcagggaaaaacaatcagttgggacattcagaatgtaagatccttgggatcc 1523

                                                                        
Query: 309  tcaattatcttggacagagtttgcagaaaggcggcaagatcagatccataaataacacga 368
            |||||||||||||  || ||||||||||| || ||||| |||| |||||||||||| |||
Sbjct: 1522 tcaattatcttggcaagtgtttgcagaaaagcagcaaggtcagctccataaataacccga 1463

                                                                        
Query: 369  tgatcagcagtaacattgacctgcatttggcacttgatcccaattctaccatcttttgta 428
            ||||| || |||||||| |||||||||||   ||||||||||||||||||||||||||||
Sbjct: 1462 tgatcggcggtaacatttacctgcatttgattcttgatcccaattctaccatcttttgta 1403

                                                                        
Query: 429  ccaacaactgtcggttgtgatgcaccaacagccatgattgctccagttccaggtggcaag 488
            |||||||  || |||| |||||| || || ||||||||||||||||||||||||||||  
Sbjct: 1402 ccaacaatggtgggttctgatgccccgacggccatgattgctccagttccaggtggcagt 1343

                                         
Query: 489  atcgcatcgaatctatcaactccaaacat 517
            || ||||| || |||||||||||||||||
Sbjct: 1342 attgcatcaaacctatcaactccaaacat 1314
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>gb|U16254.1|ZMU16254 Zea mays dihydrolipoamide acetyl transferase (ZM/DHLAAT) mRNA,
           complete cds
          Length = 564

 Score =  188 bits (95), Expect = 1e-44
 Identities = 158/178 (88%), Gaps = 2/178 (1%)
 Strand = Plus / Minus

                                                                       
Query: 342 gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcatttggcac 401
           ||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||| |
Sbjct: 449 gcaaggtcagctccataaataacacgatgatcagcggtaacatttacctgcatttggctc 390

                                                                       
Query: 402 ttgat--cccaattctaccatcttttgtaccaacaactgtcggttgtgatgcaccaacag 459
           |||||  || | | ||||| ||||||||||||||||||||||||| ||||||||| || |
Sbjct: 389 ttgatgtccgattcctaccgtcttttgtaccaacaactgtcggttctgatgcaccgacgg 330

                                                                     
Query: 460 ccatgattgctccagttccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
           |||||||||| ||||||||||||||||  || ||||| || |||||||||||||||||
Sbjct: 329 ccatgattgcgccagttccaggtggcagtattgcatcaaacctatcaactccaaacat 272
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Plus

                                                                           
Query: 282     gtctagaacgtaaggtccttgggatcctcaattatcttggacagagtttgcagaaaggcg 341
               ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 4171311 gtctaaaatgtaaggtccttgggatcctcaattatcttggaaagagtttgcagaaaagcg 4171370

                                                                
Query: 342     gcaagatcagatccataaataacacgatgatcagcagtaacattgacct 390
               |||||||||| ||| |||||||| |||||||||||||||||||||||||
Sbjct: 4171371 gcaagatcagctccgtaaataacccgatgatcagcagtaacattgacct 4171419



 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                           
Query: 387     acctgcatttggcacttgatcccaattctaccatcttttgtaccaacaactgtcggttgt 446
               ||||||||||||  |||||||||||| |||||||||||||||||||||| ||| ||||||
Sbjct: 4171512 acctgcatttggttcttgatcccaatactaccatcttttgtaccaacaagtgttggttgt 4171571

                                      
Query: 447     gatgcaccaacagccatgattgc 469
               ||||  ||||| |||||||||||
Sbjct: 4171572 gatgatccaacggccatgattgc 4171594



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                             
Query: 472     cagttccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
               ||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 4171687 cagttccaggtggcaagattgcatcaaatctgtcaactccaaacat 4171732
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Plus

                                                                           
Query: 282     gtctagaacgtaaggtccttgggatcctcaattatcttggacagagtttgcagaaaggcg 341
               ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 4171298 gtctaaaatgtaaggtccttgggatcctcaattatcttggaaagagtttgcagaaaagcg 4171357

                                                                
Query: 342     gcaagatcagatccataaataacacgatgatcagcagtaacattgacct 390
               |||||||||| ||| |||||||| |||||||||||||||||||||||||
Sbjct: 4171358 gcaagatcagctccgtaaataacccgatgatcagcagtaacattgacct 4171406



 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                           
Query: 387     acctgcatttggcacttgatcccaattctaccatcttttgtaccaacaactgtcggttgt 446
               ||||||||||||  |||||||||||| |||||||||||||||||||||| ||| ||||||
Sbjct: 4171499 acctgcatttggttcttgatcccaatactaccatcttttgtaccaacaagtgttggttgt 4171558

                                      
Query: 447     gatgcaccaacagccatgattgc 469
               ||||  ||||| |||||||||||
Sbjct: 4171559 gatgatccaacggccatgattgc 4171581



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                             
Query: 472     cagttccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
               ||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 4171674 cagttccaggtggcaagattgcatcaaatctgtcaactccaaacat 4171719
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>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 123469

 Score =  161 bits (81), Expect = 3e-36
 Identities = 102/109 (93%)
 Strand = Plus / Plus

                                                                          
Query: 282    gtctagaacgtaaggtccttgggatcctcaattatcttggacagagtttgcagaaaggcg 341
              ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 113707 gtctaaaatgtaaggtccttgggatcctcaattatcttggaaagagtttgcagaaaagcg 113766

                                                               
Query: 342    gcaagatcagatccataaataacacgatgatcagcagtaacattgacct 390
              |||||||||| ||| |||||||| |||||||||||||||||||||||||
Sbjct: 113767 gcaagatcagctccgtaaataacccgatgatcagcagtaacattgacct 113815



 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                          
Query: 387    acctgcatttggcacttgatcccaattctaccatcttttgtaccaacaactgtcggttgt 446
              ||||||||||||  |||||||||||| |||||||||||||||||||||| ||| ||||||
Sbjct: 113908 acctgcatttggttcttgatcccaatactaccatcttttgtaccaacaagtgttggttgt 113967

                                     
Query: 447    gatgcaccaacagccatgattgc 469
              ||||  ||||| |||||||||||
Sbjct: 113968 gatgatccaacggccatgattgc 113990



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                            
Query: 472    cagttccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
              ||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 114083 cagttccaggtggcaagattgcatcaaatctgtcaactccaaacat 114128
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>gb|AY108924.1| Zea mays PCO128534 mRNA sequence
          Length = 614

 Score =  141 bits (71), Expect = 3e-30
 Identities = 181/214 (84%), Gaps = 3/214 (1%)
 Strand = Plus / Minus

                                                                       
Query: 307 cctcaattatcttggacagagtttgcagaaaggcggcaagatcagatccataaataacac 366
           |||||||||||||||  || ||||||||||| || ||||| |||| |||||||||| | |
Sbjct: 605 cctcaattatcttggcaagtgtttgcagaaaagcagcaaggtcagctccataaatanccc 546

                                                                       
Query: 367 gatg-atcagcagtaacattgacctgcatttggcacttgatcccaattctaccatctttt 425
             || ||| || |||||||| |||||||||||   |||||||||||||||||||||||||
Sbjct: 545 cgtggatcggcggtaacatttacctgcatttgattcttgatcccaattctaccatctttt 486

                                                                       
Query: 426 gtaccaacaactgtcggttgtgatg-caccaacagccatgattgct-ccagttccaggtg 483
           ||||||||||  || |||| ||||| | || || |||||||||||| |||||||||||||
Sbjct: 485 gtaccaacaatggtgggttctgatgcccccgacggccatgattgctcccagttccaggtg 426

                                             
Query: 484 gcaagatcgcatcgaatctatcaactccaaacat 517
           |||  || || || || |||||||||||||||||
Sbjct: 425 gcagtattgcgtcaaacctatcaactccaaacat 392
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>gb|AC129351.6| Homo sapiens 12 BAC RP11-466G11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161618

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 116   aaaaggattattgagaaacaaa 137
             ||||||||||||||||||||||
Sbjct: 84853 aaaaggattattgagaaacaaa 84832
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>gb|AC158592.4| Mus musculus 10 BAC RP23-198D4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 196286

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 456    acagccatgattgctccagttccagg 481
              ||||||||||| ||||||||||||||
Sbjct: 167935 acagccatgatagctccagttccagg 167910
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>gb|AC129675.6| Homo sapiens 12 BAC RP11-310A24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 112495

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 116   aaaaggattattgagaaacaaa 137
             ||||||||||||||||||||||
Sbjct: 35806 aaaaggattattgagaaacaaa 35785
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>gb|AC159478.7| Mus musculus 10 BAC RP23-460F17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 174480

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 456    acagccatgattgctccagttccagg 481
              ||||||||||| ||||||||||||||
Sbjct: 109295 acagccatgatagctccagttccagg 109320
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>ref|NM_103166.2| Arabidopsis thaliana EMB3003; acyltransferase/
            dihydrolipoyllysine-residue acetyltransferase/ protein
            binding AT1G34430 (EMB3003) mRNA, complete cds
          Length = 1731

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 342  gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcat 394
            ||||||||||  ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 1398 gcaagatcagcaccatagatgacacgatgatctgccgtcacattcacctgcat 1346
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>gb|BT001042.1| Arabidopsis thaliana At1g34430/F7P12_2 mRNA, complete cds
          Length = 1398

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 342  gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcat 394
            ||||||||||  ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 1340 gcaagatcagcaccatagatgacacgatgatctgccgtcacattcacctgcat 1288
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0007P22, complete sequence
          Length = 148068

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 226   catctactgacaagcatccta 246
             |||||||||||||||||||||
Sbjct: 71965 catctactgacaagcatccta 71945
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>emb|AL355815.9| Human DNA sequence from clone RP3-453H5 on chromosome 6 Contains a
             novel gene and a CpG island, complete sequence
          Length = 92882

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   ggtaaaaggattattgagaaa 133
             |||||||||||||||||||||
Sbjct: 61098 ggtaaaaggattattgagaaa 61078
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>emb|BX571678.14| Zebrafish DNA sequence from clone DKEY-271J15 in linkage group 16,
              complete sequence
          Length = 252671

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 423    tttgtaccaacaactgtcggt 443
              |||||||||||||||||||||
Sbjct: 169776 tttgtaccaacaactgtcggt 169756
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>gb|AY128294.1| Arabidopsis thaliana At1g34430/F7P12_2 mRNA, complete cds
          Length = 1645

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 342  gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcat 394
            ||||||||||  ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 1398 gcaagatcagcaccatagatgacacgatgatctgccgtcacattcacctgcat 1346
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 226      catctactgacaagcatccta 246
                |||||||||||||||||||||
Sbjct: 22380851 catctactgacaagcatccta 22380871
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 477      ccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
                |||||||| | ||| |||||||||||||| || ||||||||
Sbjct: 14401148 ccaggtggaaggattgcatcgaatctatccacaccaaacat 14401188



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 372      tcagcagtaacattgacctg 391
                ||||||||||||||||||||
Sbjct: 14400381 tcagcagtaacattgacctg 14400400
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>emb|BX815718.1|CNS0ACXH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS87ZE09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1600

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 342  gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcat 394
            ||||||||||  ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 1447 gcaagatcagcaccatagatgacacgatgatctgccgtcacattcacctgcat 1395
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>emb|BX816473.1|CNS0AD0L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH50ZD11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1564

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 342  gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcat 394
            ||||||||||  ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 1353 gcaagatcagcaccatagatgacacgatgatctgccgtcacattcacctgcat 1301
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>gb|AY084265.1| Arabidopsis thaliana clone 101686 mRNA, complete sequence
          Length = 1702

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 342  gcaagatcagatccataaataacacgatgatcagcagtaacattgacctgcat 394
            ||||||||||  ||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 1363 gcaagatcagcaccatagatgacacgatgatctgccgtcacattcacctgcat 1311
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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0465E03
          Length = 151206

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 477   ccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
             |||||||| | ||| |||||||||||||| || ||||||||
Sbjct: 92951 ccaggtggaaggattgcatcgaatctatccacaccaaacat 92991



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   tcagcagtaacattgacctg 391
             ||||||||||||||||||||
Sbjct: 92184 tcagcagtaacattgacctg 92203
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>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           BAC clone:OJ1585_D02
          Length = 103172

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 477 ccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
           |||||||| | ||| |||||||||||||| || ||||||||
Sbjct: 713 ccaggtggaaggattgcatcgaatctatccacaccaaacat 753
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>dbj|AK060606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B10, full
            insert sequence
          Length = 1752

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 372  tcagcagtaacattgacctgcattt 396
            |||||||||||||||||| ||||||
Sbjct: 1485 tcagcagtaacattgaccagcattt 1461



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 477  ccaggtggcaagatcgcatcgaatctatcaactccaaacat 517
            |||||||| | ||| |||||||||||||| || ||||||||
Sbjct: 1380 ccaggtggaaggattgcatcgaatctatccacaccaaacat 1340
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>gb|AY111087.1| Zea mays CL10585_1 mRNA sequence
          Length = 891

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 369 tgatcagcagtaacattgacctgcatttggcacttga 405
           ||||||||||| ||||||||| |||||| || |||||
Sbjct: 332 tgatcagcagtgacattgaccagcattttgctcttga 368
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 226      catctactgacaagcatccta 246
                |||||||||||||||||||||
Sbjct: 22690762 catctactgacaagcatccta 22690782
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    aatctatcaactccaaacat 517
              ||||||||||||||||||||
Sbjct: 380716 aatctatcaactccaaacat 380697
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>gb|AC165177.2| Zea mays clone ZMMBBb-188L18, complete sequence
          Length = 137852

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 137   accaatggggagaaagtaacaagg 160
             ||||||||||||||||||| ||||
Sbjct: 25251 accaatggggagaaagtaaaaagg 25228
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>gb|AY810465.1| Schistosoma japonicum SJCHGC06930 protein mRNA, partial cds
          Length = 621

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 ccatcttttgtaccaacaac 436
           ||||||||||||||||||||
Sbjct: 56  ccatcttttgtaccaacaac 37
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>gb|AY570737.1| Schistosoma japonicum egg protein CP1084 (CP1084) mRNA, complete
           cds
          Length = 1027

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 ccatcttttgtaccaacaac 436
           ||||||||||||||||||||
Sbjct: 446 ccatcttttgtaccaacaac 427
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>gb|AY165512.1| Homo sapiens menage a trois 1 (CAK assembly factor) (MNAT1) gene,
             complete cds
          Length = 237446

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   tcccaattctaccatctttt 425
             ||||||||||||||||||||
Sbjct: 66365 tcccaattctaccatctttt 66346
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>emb|AL158042.9| Human DNA sequence from clone RP11-103J8 on chromosome 20 Contains GSSs
             and STSs, complete sequence
          Length = 83777

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   acttaagtaactatataatt 205
             ||||||||||||||||||||
Sbjct: 59983 acttaagtaactatataatt 60002
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>gb|DQ366726.1| Uncultured Prochlorococcus marinus clone HF10-88F10 genomic sequence
          Length = 32924

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   aatctatcaactccaaacat 517
             ||||||||||||||||||||
Sbjct: 20346 aatctatcaactccaaacat 20365
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>emb|AL132822.15|HSJ1017F8 Human DNA sequence from clone RP5-1017F8 on chromosome 20 Contains a
             novel gene, part of a novel gene (LOC284757) and a CpG
             island, complete sequence
          Length = 118873

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   atttggcacttgatcccaat 412
             ||||||||||||||||||||
Sbjct: 32570 atttggcacttgatcccaat 32551
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>ref|XM_970504.1| PREDICTED: Tribolium castaneum similar to CG10795-PA (LOC664503),
           mRNA
          Length = 783

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 498 aatctatcaactccaaacat 517
           ||||||||||||||||||||
Sbjct: 517 aatctatcaactccaaacat 498
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>gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence
          Length = 115478

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 137 accaatggggagaaagtaacaagg 160
           ||||||||||||||||||| ||||
Sbjct: 549 accaatggggagaaagtaaaaagg 572
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>emb|BX663513.13| Zebrafish DNA sequence from clone DKEY-234F12 in linkage group 15,
              complete sequence
          Length = 249413

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tactcatgcctgacacctat 102
              ||||||||||||||||||||
Sbjct: 189708 tactcatgcctgacacctat 189727
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 420     tcttttgtaccaacaactgt 439
               ||||||||||||||||||||
Sbjct: 8018097 tcttttgtaccaacaactgt 8018078
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>gb|AC064834.5| Homo sapiens BAC clone RP11-666B15 from 2, complete sequence
          Length = 169529

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      ggtgacaatgacatgatcca 27
              ||||||||||||||||||||
Sbjct: 112974 ggtgacaatgacatgatcca 112993
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>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0046H10
          Length = 155544

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    tcttttgtaccaacaactgt 439
              ||||||||||||||||||||
Sbjct: 125615 tcttttgtaccaacaactgt 125596
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>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592E11
          Length = 153734

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   tcttttgtaccaacaactgt 439
             ||||||||||||||||||||
Sbjct: 41866 tcttttgtaccaacaactgt 41847
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>gb|AC007621.34| Homo sapiens 12 BAC RP11-757G14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 144000

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   cttttgtaccaacaactgtc 440
             ||||||||||||||||||||
Sbjct: 32648 cttttgtaccaacaactgtc 32667
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 123     ttattgagaaacaaaccaat 142
               ||||||||||||||||||||
Sbjct: 1263137 ttattgagaaacaaaccaat 1263118
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>emb|AL132777.4|CNS01DTI Human chromosome 14 DNA sequence BAC R-307P22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 191464

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   tcccaattctaccatctttt 425
             ||||||||||||||||||||
Sbjct: 62001 tcccaattctaccatctttt 62020
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>dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB2047A4
          Length = 179110

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     tcaacgtaatcaacaattaa 66
              ||||||||||||||||||||
Sbjct: 116400 tcaacgtaatcaacaattaa 116419
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>dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1357H4, complete
             sequence
          Length = 160208

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    tcaacgtaatcaacaattaa 66
             ||||||||||||||||||||
Sbjct: 37523 tcaacgtaatcaacaattaa 37542


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,579,026
Number of Sequences: 3902068
Number of extensions: 4579026
Number of successful extensions: 79311
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79031
Number of HSP's gapped (non-prelim): 276
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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