Clone Name | rbart30c10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PLCG1_RAT (P10686) 1-phosphatidylinositol-4,5-bisphosphate phosp... | 32 | 1.0 | 2 | PLCG1_MOUSE (Q62077) 1-phosphatidylinositol-4,5-bisphosphate pho... | 32 | 1.0 | 3 | NU5C_MARPO (P06264) NAD(P)H-quinone oxidoreductase chain 5, chlo... | 30 | 3.0 | 4 | ACKA_CLOTS (Q59331) Acetate kinase (EC 2.7.2.1) (Acetokinase) | 29 | 6.6 |
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>PLCG1_RAT (P10686) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1290 Score = 32.0 bits (71), Expect = 1.0 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = -2 Query: 359 HLCAAM-VPVFLTLMLSKRTIEPDRVSL---LQMWKISWREGGSKDSNTVDVK 213 HLC ++ V +TL SK++ P+R + L+ +I+W G K ++D++ Sbjct: 24 HLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSRGADKIEGSIDIR 76
>PLCG1_MOUSE (Q62077) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II) (PLC-148) Length = 1302 Score = 32.0 bits (71), Expect = 1.0 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = -2 Query: 359 HLCAAM-VPVFLTLMLSKRTIEPDRVSL---LQMWKISWREGGSKDSNTVDVK 213 HLC ++ V +TL SK++ P+R + L+ +I+W G K ++D++ Sbjct: 24 HLCRSLEVGTVMTLFYSKKSQRPERKTFQVKLETRQITWSRGADKIEGSIDIR 76
>NU5C_MARPO (P06264) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 692 Score = 30.4 bits (67), Expect = 3.0 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +3 Query: 117 YSDGYYFYTSGYIMKNTYLLLFRRS*NCSIIIFDIYRVAIF 239 YSD Y FY GYI YL LF S ++ ++ +V IF Sbjct: 110 YSDSYMFYDEGYIKFFCYLSLFTASMLGLVLSPNLIQVYIF 150
>ACKA_CLOTS (Q59331) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 400 Score = 29.3 bits (64), Expect = 6.6 Identities = 19/68 (27%), Positives = 36/68 (52%) Frame = +3 Query: 198 CSIIIFDIYRVAIFGTAFSPTDLPHLE*AYPVRFNCPL*QHKSQENRYHRST*MFKSMSA 377 C+ I+ D+ VA+F TAF T +P YP+ + ++K ++ +H ++ + S A Sbjct: 133 CTQIMPDVPMVAVFDTAFHQT-MPDYAYLYPIPYEYYT-KYKIRKYGFHGTSHKYVSQRA 190 Query: 378 NNVMCPPI 401 ++ PI Sbjct: 191 AEILNKPI 198 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,980,640 Number of Sequences: 219361 Number of extensions: 1580727 Number of successful extensions: 3211 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3211 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)