ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189367.1| Oryza sativa (japonica cultivar-group), predic... 202 8e-49
2dbj|AK067659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 8e-49
3gb|AY105853.1| Zea mays PCO065335 mRNA sequence 165 2e-37
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 113 6e-22
5dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic D... 113 6e-22
6gb|AC080165.6| Homo sapiens BAC clone RP11-747L21 from 2, comple... 48 0.028
7gb|AC096669.1| Homo sapiens BAC clone RP11-380G16 from 2, comple... 48 0.028
8ref|NM_105788.1| Arabidopsis thaliana SAG18 AT1G71190 (SAG18) mR... 46 0.11
9emb|BX818127.1|CNS0ACO4 Arabidopsis thaliana Full-length cDNA Co... 46 0.11
10gb|AC164613.3| Mus musculus BAC clone RP23-324B8 from chromosome... 42 1.8
11gb|AC110901.16| Mus musculus chromosome 13, clone RP24-165P9, co... 42 1.8
12gb|AC091564.12| Homo sapiens chromosome 11, clone RP11-732A19, c... 42 1.8
13gb|AC016972.7|AC016972 Arabidopsis thaliana chromosome 1 BAC F23... 42 1.8
14gb|AC104695.2| Homo sapiens BAC clone RP11-373D23 from 2, comple... 42 1.8
15emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chr... 42 1.8
16gb|CP000234.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 6.9
17gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome... 40 6.9
18gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome... 40 6.9
19gb|AC090894.10| Homo sapiens chromosome 17, clone RP11-744K17, c... 40 6.9
20gb|AC022535.6| Homo sapiens chromosome 10 clone RP11-34C15, comp... 40 6.9
21gb|AC096773.3| Homo sapiens BAC clone RP11-810P8 from 4, complet... 40 6.9
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
23dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
24gb|AC107940.13| Homo sapiens chromosome 17, clone RP11-158C19, c... 40 6.9
25gb|AC132825.8| Homo sapiens chromosome 8, clone RP13-929K23, com... 40 6.9
26dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
27dbj|AP004013.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
28gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
29emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.9
30emb|Z81031.1|CEC02D4 Caenorhabditis elegans Cosmid C02D4, comple... 40 6.9
31gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10,... 40 6.9
32emb|AL671890.11| Mouse DNA sequence from clone RP23-408A13 on ch... 40 6.9
33gb|AC132822.3| Homo sapiens chromosome 17, clone RP13-885L6, com... 40 6.9 
>ref|NM_189367.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 891

 Score =  202 bits (102), Expect = 8e-49
 Identities = 213/250 (85%)
 Strand = Plus / Minus

                                                                       
Query: 264 cttccacatctggagtaagcttaccctgtcaggttcaattgtcctctttgacaacataag 323
           |||||||  ||||| ||| |||||||| || |||||||  ||||| || | || ||| ||
Sbjct: 795 cttccaccgctggaataaacttaccctttctggttcaacagtccttttggccagcatgag 736

                                                                       
Query: 324 agtcaagaaaacaggtaccatcgcagcacatagatgtttaagagtatgtccgctaacaat 383
            | |||||| ||||| ||||| ||||||  |||||| ||||||||||| |||||||||||
Sbjct: 735 tgccaagaacacaggcaccattgcagcagctagatgcttaagagtatgaccgctaacaat 676

                                                                       
Query: 384 gtcatgtgtccacctatatataggtttgtctgcagcctcttctactttggcaagaaggta 443
            | ||| |||||  ||||||||||||| ||||| ||||||||||| || ||||| |||||
Sbjct: 675 ttgatgggtccatttatatataggtttatctgcggcctcttctaccttagcaaggaggta 616

                                                                       
Query: 444 aaatcctgctgcccacaaccagtagcttgaatgtgtatacattggtggaataactatagc 503
           ||||||||||||||||| ||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 615 aaatcctgctgcccacagccaatagctcgaatgtgtatacattggtggaattacaatagc 556

                     
Query: 504 catcacaggt 513
           ||||||||||
Sbjct: 555 catcacaggt 546
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>dbj|AK067659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114K13, full
           insert sequence
          Length = 1183

 Score =  202 bits (102), Expect = 8e-49
 Identities = 213/250 (85%)
 Strand = Plus / Minus

                                                                       
Query: 264 cttccacatctggagtaagcttaccctgtcaggttcaattgtcctctttgacaacataag 323
           |||||||  ||||| ||| |||||||| || |||||||  ||||| || | || ||| ||
Sbjct: 888 cttccaccgctggaataaacttaccctttctggttcaacagtccttttggccagcatgag 829

                                                                       
Query: 324 agtcaagaaaacaggtaccatcgcagcacatagatgtttaagagtatgtccgctaacaat 383
            | |||||| ||||| ||||| ||||||  |||||| ||||||||||| |||||||||||
Sbjct: 828 tgccaagaacacaggcaccattgcagcagctagatgcttaagagtatgaccgctaacaat 769

                                                                       
Query: 384 gtcatgtgtccacctatatataggtttgtctgcagcctcttctactttggcaagaaggta 443
            | ||| |||||  ||||||||||||| ||||| ||||||||||| || ||||| |||||
Sbjct: 768 ttgatgggtccatttatatataggtttatctgcggcctcttctaccttagcaaggaggta 709

                                                                       
Query: 444 aaatcctgctgcccacaaccagtagcttgaatgtgtatacattggtggaataactatagc 503
           ||||||||||||||||| ||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 708 aaatcctgctgcccacagccaatagctcgaatgtgtatacattggtggaattacaatagc 649

                     
Query: 504 catcacaggt 513
           ||||||||||
Sbjct: 648 catcacaggt 639
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>gb|AY105853.1| Zea mays PCO065335 mRNA sequence
          Length = 581

 Score =  165 bits (83), Expect = 2e-37
 Identities = 182/215 (84%)
 Strand = Plus / Minus

                                                                       
Query: 255 ccaactgatcttccacatctggagtaagcttaccctgtcaggttcaattgtcctctttga 314
           ||||||| |||||||| ||||||| ||||||| ||| || |||||  | ||||| || | 
Sbjct: 222 ccaactggtcttccacttctggagcaagcttatcctttctggttcggtagtccttttagc 163

                                                                       
Query: 315 caacataagagtcaagaaaacaggtaccatcgcagcacatagatgtttaagagtatgtcc 374
            | ||| |||| || |||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 162 tagcatgagagccaggaaaaccggtaccatcgcagcacatagatgcttaagagtatgacc 103

                                                                       
Query: 375 gctaacaatgtcatgtgtccacctatatataggtttgtctgcagcctcttctactttggc 434
            |||||||| | ||| |||||  | || |||| |||||| ||||||||||| ||||| ||
Sbjct: 102 actaacaatctgatgagtccaattgtagatagttttgtcagcagcctcttccactttagc 43

                                              
Query: 435 aagaaggtaaaatcctgctgcccacaaccagtagc 469
           ||| |||||||||||||||||||||||||||||||
Sbjct: 42  aaggaggtaaaatcctgctgcccacaaccagtagc 8
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  113 bits (57), Expect = 6e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                            
Query: 327      caagaaaacaggtaccatcgcagcacatagatgtttaagagtatgtccgctaacaatgtc 386
                |||||| ||||| ||||| ||||||  |||||| ||||||||||| ||||||||||| | 
Sbjct: 42406720 caagaacacaggcaccattgcagcagctagatgcttaagagtatgaccgctaacaatttg 42406779

                                                                            
Query: 387      atgtgtccacctatatataggtttgtctgcagcctcttctactttggcaagaaggtaaaa 446
                ||| |||||  ||||||||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 42406780 atgggtccatttatatataggtttatctgcggcctcttctaccttagcaaggaggtaaaa 42406839

                     
Query: 447      tcctg 451
                |||||
Sbjct: 42406840 tcctg 42406844



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                            
Query: 448      cctgctgcccacaaccagtagcttgaatgtgtatacattggtggaataactatagccatc 507
                ||||||||||||| ||| ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 42407130 cctgctgcccacagccaatagctcgaatgtgtatacattggtggaattacaatagccatc 42407189

                      
Query: 508      acaggt 513
                ||||||
Sbjct: 42407190 acaggt 42407195
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>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0483G10
          Length = 190721

 Score =  113 bits (57), Expect = 6e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                         
Query: 327   caagaaaacaggtaccatcgcagcacatagatgtttaagagtatgtccgctaacaatgtc 386
             |||||| ||||| ||||| ||||||  |||||| ||||||||||| ||||||||||| | 
Sbjct: 66058 caagaacacaggcaccattgcagcagctagatgcttaagagtatgaccgctaacaatttg 66117

                                                                         
Query: 387   atgtgtccacctatatataggtttgtctgcagcctcttctactttggcaagaaggtaaaa 446
             ||| |||||  ||||||||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct: 66118 atgggtccatttatatataggtttatctgcggcctcttctaccttagcaaggaggtaaaa 66177

                  
Query: 447   tcctg 451
             |||||
Sbjct: 66178 tcctg 66182



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                         
Query: 448   cctgctgcccacaaccagtagcttgaatgtgtatacattggtggaataactatagccatc 507
             ||||||||||||| ||| ||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 66468 cctgctgcccacagccaatagctcgaatgtgtatacattggtggaattacaatagccatc 66527

                   
Query: 508   acaggt 513
             ||||||
Sbjct: 66528 acaggt 66533
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>gb|AC080165.6| Homo sapiens BAC clone RP11-747L21 from 2, complete sequence
          Length = 63279

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 151   acattatgaaaaacacatatctac 174
             ||||||||||||||||||||||||
Sbjct: 61386 acattatgaaaaacacatatctac 61363
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>gb|AC096669.1| Homo sapiens BAC clone RP11-380G16 from 2, complete sequence
          Length = 218670

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 151 acattatgaaaaacacatatctac 174
           ||||||||||||||||||||||||
Sbjct: 107 acattatgaaaaacacatatctac 84
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>ref|NM_105788.1| Arabidopsis thaliana SAG18 AT1G71190 (SAG18) mRNA, complete cds
          Length = 1078

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 122/155 (78%)
 Strand = Plus / Minus

                                                                       
Query: 334 acaggtaccatcgcagcacatagatgtttaagagtatgtccgctaacaatgtcatgtgtc 393
           ||||| ||||| || ||||| ||||| || |||| ||| || |||| ||| | ||| |||
Sbjct: 755 acagggaccatagcggcacacagatgcttcagagaatgcccactaataatatgatgagtc 696

                                                                       
Query: 394 cacctatatataggtttgtctgcagcctcttctactttggcaagaaggtaaaatcctgct 453
           || ||||||||||| || || ||||| ||||| || ||||| |  || || || ||||| 
Sbjct: 695 cagctatatataggcttatccgcagcttcttccaccttggctaagagatagaaccctgca 636

                                              
Query: 454 gcccacaaccagtagcttgaatgtgtatacattgg 488
           ||||| | ||| ||  | |||||||||||||||||
Sbjct: 635 gcccatagccaataagtggaatgtgtatacattgg 601
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>emb|BX818127.1|CNS0ACO4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL62ZD11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 484

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 122/155 (78%)
 Strand = Plus / Minus

                                                                       
Query: 334 acaggtaccatcgcagcacatagatgtttaagagtatgtccgctaacaatgtcatgtgtc 393
           ||||| ||||| || ||||| ||||| || |||| ||| || |||| ||| | ||| |||
Sbjct: 157 acagggaccatagcggcacacagatgcttcagagaatgcccactaataatatgatgagtc 98

                                                                       
Query: 394 cacctatatataggtttgtctgcagcctcttctactttggcaagaaggtaaaatcctgct 453
           || ||||||||||| || || ||||| ||||| || ||||| |  || || || ||||| 
Sbjct: 97  cagctatatataggcttatccgcagcttcttccaccttggctaagagatagaaccctgca 38

                                              
Query: 454 gcccacaaccagtagcttgaatgtgtatacattgg 488
           ||||| | ||| ||  | |||||||||||||||||
Sbjct: 37  gcccatagccaataagtggaatgtgtatacattgg 3
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>gb|AC164613.3| Mus musculus BAC clone RP23-324B8 from chromosome 13, complete sequence
          Length = 197469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 467   agcttgaatgtgtatacattg 487
             |||||||||||||||||||||
Sbjct: 21871 agcttgaatgtgtatacattg 21851
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>gb|AC110901.16| Mus musculus chromosome 13, clone RP24-165P9, complete sequence
          Length = 179128

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 467   agcttgaatgtgtatacattg 487
             |||||||||||||||||||||
Sbjct: 61145 agcttgaatgtgtatacattg 61165
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>gb|AC091564.12| Homo sapiens chromosome 11, clone RP11-732A19, complete sequence
          Length = 211735

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 250    tctctccaactgatcttccacatct 274
              ||||||| |||||||||||||||||
Sbjct: 155734 tctctcccactgatcttccacatct 155710
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>gb|AC016972.7|AC016972 Arabidopsis thaliana chromosome 1 BAC F23N20 genomic sequence, complete
             sequence
          Length = 66653

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                         
Query: 334   acaggtaccatcgcagcacatagatgtttaagagtatgtccgctaacaatgtcatgtgtc 393
             ||||| ||||| || ||||| ||||| || |||| ||| || |||| ||| | ||| |||
Sbjct: 58581 acagggaccatagcggcacacagatgcttcagagaatgcccactaataatatgatgagtc 58640

                                                      
Query: 394   cacctatatataggtttgtctgcagcctcttctactttggc 434
             || ||||||||||| || || ||||| ||||| || |||||
Sbjct: 58641 cagctatatataggcttatccgcagcttcttccaccttggc 58681
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>gb|AC104695.2| Homo sapiens BAC clone RP11-373D23 from 2, complete sequence
          Length = 157665

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   aggtaaaatcctgctgcccac 459
             |||||||||||||||||||||
Sbjct: 69975 aggtaaaatcctgctgcccac 69955
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>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete
             sequence
          Length = 142263

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 161   aaacacatatctactgttgtt 181
             |||||||||||||||||||||
Sbjct: 60148 aaacacatatctactgttgtt 60128
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>gb|CP000234.1| Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,
              complete genome
          Length = 242436

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    gatactatttttacacttcg 146
              ||||||||||||||||||||
Sbjct: 241788 gatactatttttacacttcg 241807
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>gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome 8, complete sequence
          Length = 167913

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ggccactgatatacattttt 25
             ||||||||||||||||||||
Sbjct: 29543 ggccactgatatacattttt 29524
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>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete
            sequence
          Length = 201483

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    ggccactgatatacattttt 25
            ||||||||||||||||||||
Sbjct: 3514 ggccactgatatacattttt 3533
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>gb|AC090894.10| Homo sapiens chromosome 17, clone RP11-744K17, complete sequence
          Length = 150680

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   tgtatacattggtggaataa 496
             ||||||||||||||||||||
Sbjct: 37347 tgtatacattggtggaataa 37366
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>gb|AC022535.6| Homo sapiens chromosome 10 clone RP11-34C15, complete sequence
          Length = 178864

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   atattcagatggatactatt 135
             ||||||||||||||||||||
Sbjct: 25462 atattcagatggatactatt 25481
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>gb|AC096773.3| Homo sapiens BAC clone RP11-810P8 from 4, complete sequence
          Length = 136403

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   acacatatctactgttgttc 182
             ||||||||||||||||||||
Sbjct: 88426 acacatatctactgttgttc 88445
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 469      cttgaatgtgtatacattgg 488
                ||||||||||||||||||||
Sbjct: 12252398 cttgaatgtgtatacattgg 12252379
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 469     cttgaatgtgtatacattgg 488
               ||||||||||||||||||||
Sbjct: 9392350 cttgaatgtgtatacattgg 9392369
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>gb|AC107940.13| Homo sapiens chromosome 17, clone RP11-158C19, complete sequence
          Length = 164186

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   tgtatacattggtggaataa 496
             ||||||||||||||||||||
Sbjct: 28768 tgtatacattggtggaataa 28749
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>gb|AC132825.8| Homo sapiens chromosome 8, clone RP13-929K23, complete sequence
          Length = 137261

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   tgtatacattggtggaataa 496
             ||||||||||||||||||||
Sbjct: 42949 tgtatacattggtggaataa 42930
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>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1112_D12
          Length = 97572

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   cttgaatgtgtatacattgg 488
             ||||||||||||||||||||
Sbjct: 16941 cttgaatgtgtatacattgg 16960
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>dbj|AP004013.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1575_B01
          Length = 86158

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   cttgaatgtgtatacattgg 488
             ||||||||||||||||||||
Sbjct: 68579 cttgaatgtgtatacattgg 68598
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 469      cttgaatgtgtatacattgg 488
                ||||||||||||||||||||
Sbjct: 12206768 cttgaatgtgtatacattgg 12206749
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>emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa0017L03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159296

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   cttgaatgtgtatacattgg 488
             ||||||||||||||||||||
Sbjct: 44919 cttgaatgtgtatacattgg 44938
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>emb|Z81031.1|CEC02D4 Caenorhabditis elegans Cosmid C02D4, complete sequence
          Length = 28611

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 204 ataatcatatttgacatctaccgt 227
           |||||| |||||||||||||||||
Sbjct: 908 ataatcgtatttgacatctaccgt 931
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>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence
          Length = 107205

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    caagatttgatcatggaaaa 55
             ||||||||||||||||||||
Sbjct: 64825 caagatttgatcatggaaaa 64806
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>emb|AL671890.11| Mouse DNA sequence from clone RP23-408A13 on chromosome X, complete
              sequence
          Length = 198788

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    tccacctatatataggtttg 411
              ||||||||||||||||||||
Sbjct: 146341 tccacctatatataggtttg 146360
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>gb|AC132822.3| Homo sapiens chromosome 17, clone RP13-885L6, complete sequence
          Length = 133778

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   tgtatacattggtggaataa 496
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Sbjct: 32614 tgtatacattggtggaataa 32595


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,767,644
Number of Sequences: 3902068
Number of extensions: 4767644
Number of successful extensions: 81821
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81670
Number of HSP's gapped (non-prelim): 149
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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