Clone Name | rbart30c09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_513139.1| PREDICTED: Pan troglodytes similar to cytochrome P450 4Z1 (LOC456556), mRNA Length = 1809 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aacggcacatgggtattttt 26 |||||||||||||||||||| Sbjct: 375 aacggcacatgggtattttt 356
>gb|U41548.2| Caenorhabditis elegans cosmid M02F4, complete sequence Length = 26835 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tatttttattacacggttaa 39 |||||||||||||||||||| Sbjct: 7582 tatttttattacacggttaa 7601
>gb|AY696295.1| Homo sapiens cytochrome P450 (CYP4Z2P) mRNA, complete cds, alternatively spliced Length = 1197 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aacggcacatgggtattttt 26 |||||||||||||||||||| Sbjct: 240 aacggcacatgggtattttt 221
>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete sequence Length = 195132 Score = 40.1 bits (20), Expect = 1.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 35 gttaagtaggcagcactagtagtggact 62 ||||||| |||||| ||||||||||||| Sbjct: 112178 gttaagtgggcagcgctagtagtggact 112205
>gb|AY262057.1| Homo sapiens cytochrome P450 (CYP4Z2P) pseudogene mRNA, complete sequence Length = 1436 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aacggcacatgggtattttt 26 |||||||||||||||||||| Sbjct: 243 aacggcacatgggtattttt 224
>emb|AL731892.6| Human DNA sequence from clone RP11-346M5 on chromosome 1 Contains the 5' end of a cytochrome P450 4Z1 (CYP4Z1) pseudogene, a tubulin alpha pseudogene, the CYP4A11 gene for cytochrome P450 family 4 subfamily A polypeptide 11, complete sequence Length = 123921 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aacggcacatgggtattttt 26 |||||||||||||||||||| Sbjct: 16172 aacggcacatgggtattttt 16191
>dbj|AK097373.1| Homo sapiens cDNA FLJ40054 fis, clone TBAES2000315, weakly similar to CYTOCHROME P450 4A1 (EC 1.14.15.3) Length = 2608 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aacggcacatgggtattttt 26 |||||||||||||||||||| Sbjct: 281 aacggcacatgggtattttt 262
>ref|NR_002788.1| Homo sapiens cytochrome P450 4Z2 pseudogene (CYP4Z2P) on chromosome 1 Length = 2608 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aacggcacatgggtattttt 26 |||||||||||||||||||| Sbjct: 281 aacggcacatgggtattttt 262
>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence Length = 207157 Score = 40.1 bits (20), Expect = 1.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 35 gttaagtaggcagcactagtagtggact 62 ||||||| |||||| ||||||||||||| Sbjct: 195804 gttaagtgggcagcgctagtagtggact 195777
>gb|AF039039.2| Caenorhabditis elegans cosmid T08B1, complete sequence Length = 32472 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 11 gcacatgggtatttttattacac 33 |||| |||||||||||||||||| Sbjct: 9254 gcacctgggtatttttattacac 9276
>emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chromosome 13 Contains the 3' end of the CLYBL gene for citrate lyase beta like (CLB bA134O15.1) and a CpG island, complete sequence Length = 174128 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 110 agggataaaacctggtgat 128 ||||||||||||||||||| Sbjct: 49542 agggataaaacctggtgat 49524
>gb|AC122707.2| Homo sapiens chromosome 5 clone RP11-158J3, complete sequence Length = 180483 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 7 aacggcacatgggtatttttatt 29 ||||||||||||| ||||||||| Sbjct: 32018 aacggcacatgggcatttttatt 31996
>emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chromosome X, complete sequence Length = 190178 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 catgggtatttttattaca 32 ||||||||||||||||||| Sbjct: 67838 catgggtatttttattaca 67820 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 883,814 Number of Sequences: 3902068 Number of extensions: 883814 Number of successful extensions: 47935 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47920 Number of HSP's gapped (non-prelim): 15 length of query: 131 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 110 effective length of database: 17,151,101,840 effective search space: 1886621202400 effective search space used: 1886621202400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)