ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart30c05 |
|---|---|
| Clone Library Name | barley_pub |
>IDHC_SOYBN (Q06197) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 413 Score = 149 bits (375), Expect = 5e-36 Identities = 73/88 (82%), Positives = 82/88 (93%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNA+LL+F +KLE AC+G VE+GKMTKDL Sbjct: 320 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEAACIGVVEAGKMTKDL 379 Query: 305 ALLVHGSSKVTRSDYLNTEEFIDAVAAE 222 AL++HG SK++R YLNTEEFIDAVAAE Sbjct: 380 ALILHG-SKLSREHYLNTEEFIDAVAAE 406
>IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC| 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 Score = 149 bits (375), Expect = 5e-36 Identities = 74/88 (84%), Positives = 81/88 (92%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNA LL+F +KLE AC+G VESGKMTKDL Sbjct: 340 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEKLEAACIGVVESGKMTKDL 399 Query: 305 ALLVHGSSKVTRSDYLNTEEFIDAVAAE 222 AL++HG SK++R YLNTEEFIDAVAAE Sbjct: 400 ALILHG-SKLSREHYLNTEEFIDAVAAE 426
>IDHC_TOBAC (P50218) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 415 Score = 143 bits (361), Expect = 2e-34 Identities = 71/88 (80%), Positives = 79/88 (89%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 RVHQKGGETSTNSIASIFAWTRGLAHRA LD+N RLL+F +KLE AC+G VESGKMTKDL Sbjct: 319 RVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDL 378 Query: 305 ALLVHGSSKVTRSDYLNTEEFIDAVAAE 222 AL++HG SK++R YLNTEEFIDAVA E Sbjct: 379 ALIIHG-SKLSRDHYLNTEEFIDAVADE 405
>IDHC_SOLTU (P50217) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 416 Score = 140 bits (354), Expect = 1e-33 Identities = 69/88 (78%), Positives = 77/88 (87%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 RVHQKGGETSTNSIASIFAWTRGLAHRA LD+N RLL+F +KLE AC+G VESGKMTKDL Sbjct: 319 RVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDL 378 Query: 305 ALLVHGSSKVTRSDYLNTEEFIDAVAAE 222 AL++ SK++R YLNTEEFIDAVA E Sbjct: 379 ALIIIHGSKLSREHYLNTEEFIDAVADE 406
>IDHC_MICOH (Q9Z2K8) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 113 bits (282), Expect = 3e-25 Identities = 55/83 (66%), Positives = 65/83 (78%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R+HQKG ETSTN IASIFAW+RGLAHRA+LD+N L FA+ LEE C+ T+E+G MTKDL Sbjct: 317 RMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDL 376 Query: 305 ALLVHGSSKVTRSDYLNTEEFID 237 A + G V RSDYLNT EF+D Sbjct: 377 AACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_MICME (Q9Z2K9) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 113 bits (282), Expect = 3e-25 Identities = 55/83 (66%), Positives = 65/83 (78%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R+HQKG ETSTN IASIFAW+RGLAHRA+LD+N L FA+ LEE C+ T+E+G MTKDL Sbjct: 317 RMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDL 376 Query: 305 ALLVHGSSKVTRSDYLNTEEFID 237 A + G V RSDYLNT EF+D Sbjct: 377 AACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_RAT (P41562) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 111 bits (278), Expect = 9e-25 Identities = 55/83 (66%), Positives = 64/83 (77%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R++QKG ETSTN IASIFAW+RGLAHRAKLD+N L FA LEE C+ T+E+G MTKDL Sbjct: 317 RMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFANALEEVCIETIEAGFMTKDL 376 Query: 305 ALLVHGSSKVTRSDYLNTEEFID 237 A + G V RSDYLNT EF+D Sbjct: 377 AACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_MOUSE (O88844) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 110 bits (276), Expect = 2e-24 Identities = 54/83 (65%), Positives = 65/83 (78%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R++QKG ETSTN IASIFAW+RGLAHRAKLD+N L FA+ LE+ C+ T+E+G MTKDL Sbjct: 317 RMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFAKALEDVCIETIEAGFMTKDL 376 Query: 305 ALLVHGSSKVTRSDYLNTEEFID 237 A + G V RSDYLNT EF+D Sbjct: 377 AACIKGLPNVQRSDYLNTFEFMD 399
>IDHC_HUMAN (O75874) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 414 Score = 109 bits (272), Expect = 4e-24 Identities = 55/83 (66%), Positives = 63/83 (75%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R++QKG ETSTN IASIFAWTRGLAHRAKLD+N L FA LEE + T+E+G MTKDL Sbjct: 317 RMYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDL 376 Query: 305 ALLVHGSSKVTRSDYLNTEEFID 237 A + G V RSDYLNT EF+D Sbjct: 377 AACIKGLPNVQRSDYLNTFEFMD 399
>IDHP_BOVIN (Q04467) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 106 bits (265), Expect = 3e-23 Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 1/86 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R HQKG TSTN IASIFAWTRGL HR KLD N L+ FAQ LE+ CV TVESG MTKDL Sbjct: 356 REHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDL 415 Query: 305 ALLVHGSSKVTRSD-YLNTEEFIDAV 231 A +HG S V ++ +LNT +F+D + Sbjct: 416 AGCIHGLSNVKLNEHFLNTSDFLDTI 441
>IDHP_PIG (P33198) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) (Fragment) Length = 421 Score = 106 bits (265), Expect = 3e-23 Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 1/86 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R HQKG TSTN IASIFAWTRGL HR KLD N L+ FAQ LE+ CV TVESG MTKDL Sbjct: 325 REHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDL 384 Query: 305 ALLVHGSSKVTRSD-YLNTEEFIDAV 231 A +HG S V ++ +LNT +F+D + Sbjct: 385 AGCIHGLSNVKLNEHFLNTSDFLDTI 410
>IDHP_HUMAN (P48735) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 452 Score = 106 bits (264), Expect = 4e-23 Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 1/86 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R HQKG TSTN IASIFAWTRGL HR KLD N L+ FAQ LE+ CV TVESG MTKDL Sbjct: 356 REHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESGAMTKDL 415 Query: 305 ALLVHGSSKVTRSD-YLNTEEFIDAV 231 A +HG S V ++ +LNT +F+D + Sbjct: 416 AGCIHGLSNVKLNEHFLNTTDFLDTI 441
>IDH_MYCTU (P65097) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 99.4 bits (246), Expect = 5e-21 Identities = 50/86 (58%), Positives = 61/86 (70%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R +Q G TSTN IASIFAWTRGL HR KLD +++FA KLE + TVESGKMTKDL Sbjct: 320 RQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDL 379 Query: 305 ALLVHGSSKVTRSDYLNTEEFIDAVA 228 A+L+ D+LN+EEF+DA+A Sbjct: 380 AILIG-----PEQDWLNSEEFLDAIA 400
>IDH_MYCBO (P65098) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 409 Score = 99.4 bits (246), Expect = 5e-21 Identities = 50/86 (58%), Positives = 61/86 (70%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R +Q G TSTN IASIFAWTRGL HR KLD +++FA KLE + TVESGKMTKDL Sbjct: 320 RQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDL 379 Query: 305 ALLVHGSSKVTRSDYLNTEEFIDAVA 228 A+L+ D+LN+EEF+DA+A Sbjct: 380 AILIG-----PEQDWLNSEEFLDAIA 400
>IDH1_CANTR (O13285) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (CtIDP1) Length = 430 Score = 96.7 bits (239), Expect = 3e-20 Identities = 53/87 (60%), Positives = 64/87 (73%), Gaps = 1/87 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGK-MTKD 309 R HQ+G ETSTNSIASIFAWTRGLA R KLD+ +++FA KLE+A + TVE + MTKD Sbjct: 342 RQHQQGKETSTNSIASIFAWTRGLAQRGKLDETPDVVDFASKLEQATIDTVEVDRIMTKD 401 Query: 308 LALLVHGSSKVTRSDYLNTEEFIDAVA 228 LAL + K RS Y+ T EF+DAVA Sbjct: 402 LALAM---GKTDRSAYVTTTEFLDAVA 425
>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (ICD-M) Length = 523 Score = 95.9 bits (237), Expect = 5e-20 Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R HQKG TST IASIFAWTRGL HR KLD N L+ FAQ E+ CV TVE G MTKDL Sbjct: 428 REHQKGRPTSTKGIASIFAWTRGLEHRGKLDGNQDLIRFAQTREKVCVQTVE-GAMTKDL 486 Query: 305 ALLVHGSSKVTRSD-YLNTEEFIDAV 231 A +HG S V ++ +LNT +F+D + Sbjct: 487 AGCIHGLSNVKLNEHFLNTTDFLDTI 512
>IDHP_SCHPO (O14254) Probable isocitrate dehydrogenase [NADP], mitochondrial| precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 418 Score = 94.7 bits (234), Expect = 1e-19 Identities = 51/84 (60%), Positives = 61/84 (72%) Frame = -1 Query: 473 KGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDLALLV 294 KG +TSTNSIASIFAWTRGLAHR +LD N RL++FA LE ACV VE G MTKDL LL Sbjct: 331 KGKKTSTNSIASIFAWTRGLAHRGRLDGNERLVKFANALEHACVRCVEKGIMTKDLYLL- 389 Query: 293 HGSSKVTRSDYLNTEEFIDAVAAE 222 + + Y++T EF+DAV +E Sbjct: 390 ----SKSPNGYVDTFEFLDAVKSE 409
>IDHC_YEAST (P41939) Isocitrate dehydrogenase [NADP] cytoplasmic (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 412 Score = 94.0 bits (232), Expect = 2e-19 Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 1/86 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTV-ESGKMTKD 309 R HQ+G ETSTNSIASIFAWTRG+ R KLD+ +++F Q LE A V TV E G MTKD Sbjct: 317 RQHQQGKETSTNSIASIFAWTRGIIQRGKLDNTPDVVKFGQILESATVNTVQEDGIMTKD 376 Query: 308 LALLVHGSSKVTRSDYLNTEEFIDAV 231 LAL++ K RS Y+ TEEFIDAV Sbjct: 377 LALIL---GKSERSAYVTTEEFIDAV 399
>IDH2_CANTR (O13294) Isocitrate dehydrogenase [NADP] peroxisomal (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (PS-NADP-IDH) (CtIDP2) Length = 410 Score = 94.0 bits (232), Expect = 2e-19 Identities = 51/87 (58%), Positives = 61/87 (70%), Gaps = 1/87 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGK-MTKD 309 R HQ+G ETSTNSIASI+AWTRGL R KLDD +++FA++LE+A + TV MTKD Sbjct: 318 RQHQQGKETSTNSIASIYAWTRGLIQRGKLDDTPEVVKFAEELEKAVIETVSKDNIMTKD 377 Query: 308 LALLVHGSSKVTRSDYLNTEEFIDAVA 228 LAL K RS Y+ TEEFID VA Sbjct: 378 LALT---QGKTDRSSYVTTEEFIDGVA 401
>IDHH_YEAST (P53982) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 420 Score = 92.8 bits (229), Expect = 4e-19 Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVE-SGKMTKD 309 R HQ+G ETSTNSIASIFAWTR + R KLD+ +++F LE+A + TV+ GKMTKD Sbjct: 317 RKHQRGEETSTNSIASIFAWTRAIIQRGKLDNTDDVIKFGNLLEKATLDTVQVGGKMTKD 376 Query: 308 LALLVHGSSKVTRSDYLNTEEFIDAVA 228 LAL++ K RS Y+ TEEFID VA Sbjct: 377 LALML---GKTNRSSYVTTEEFIDEVA 400
>IDH_SPHYA (P50215) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)| (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 406 Score = 87.4 bits (215), Expect = 2e-17 Identities = 43/85 (50%), Positives = 58/85 (68%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTVESGKMTKDL 306 R HQ+G TSTN IASIFAWT+GL+ R K DD +++FA+ LE+ C+ TVE G MTKDL Sbjct: 315 RQHQQGKATSTNPIASIFAWTQGLSFRGKFDDTPDVVKFAETLEQVCIKTVEGGAMTKDL 374 Query: 305 ALLVHGSSKVTRSDYLNTEEFIDAV 231 ALL+ ++ TE+F +A+ Sbjct: 375 ALLIGPDQA-----WMTTEQFFEAI 394
>IDHP_YEAST (P21954) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 428 Score = 84.7 bits (208), Expect = 1e-16 Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 1/86 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTV-ESGKMTKD 309 R +QKG ETSTNSIASIFAW+RGL R +LD+ L +FA LE A + TV + G MTKD Sbjct: 334 RKYQKGEETSTNSIASIFAWSRGLLKRGELDNTPALCKFANILESATLNTVQQDGIMTKD 393 Query: 308 LALLVHGSSKVTRSDYLNTEEFIDAV 231 LAL + RS Y+ TEEF+DAV Sbjct: 394 LALACGNNE---RSAYVTTEEFLDAV 416
>IDHP_ASPNG (P79089) Isocitrate dehydrogenase [NADP], mitochondrial precursor| (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) Length = 498 Score = 82.0 bits (201), Expect = 8e-16 Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = -1 Query: 485 RVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNARLLEFAQKLEEACVGTV-ESGKMTKD 309 R HQKG ETSTN IASIFAWTRGL R KLD+ ++ FA++LE AC+ V + G MTKD Sbjct: 404 REHQKGRETSTNPIASIFAWTRGLIQRGKLDETPDVVTFAEELERACIEVVNDEGIMTKD 463 Query: 308 LALLVHGSSKVTRSDYLNTEEFIDAV 231 LAL + R ++ T E++ AV Sbjct: 464 LAL---ACGRKEREAWVTTREYMAAV 486
>IDH3A_RAT (Q99NA5) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) Length = 366 Score = 28.9 bits (63), Expect = 7.6 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -1 Query: 380 LLEFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNTEE 246 L + A K+E AC T++ GK +TKDL G+SK SD+ TEE Sbjct: 320 LFDHAAKIEAACFATIKDGKSLTKDLG----GNSKC--SDF--TEE 357
>IDH3A_BOVIN (P41563) Isocitrate dehydrogenase [NAD] subunit alpha,| mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH) (Isocitrate dehydrogenase subunits 3/4) Length = 366 Score = 28.9 bits (63), Expect = 7.6 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -1 Query: 380 LLEFAQKLEEACVGTVESGK-MTKDLALLVHGSSKVTRSDYLNTEE 246 L + A K+E AC T++ GK +TKDL G+SK SD+ TEE Sbjct: 320 LFDHAAKIETACFATIKDGKSLTKDLG----GNSKC--SDF--TEE 357
>VCAM1_RAT (P29534) Vascular cell adhesion protein 1 precursor (V-CAM 1)| Length = 739 Score = 28.5 bits (62), Expect = 9.9 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Frame = -1 Query: 428 WTRGLAHRA--KLDDNARLLEFAQKLEEA----CVGTVESGKMTKDLALLVHGSSK 279 W+R L + L N L A K+E++ C G E+G K + L++ GSSK Sbjct: 546 WSRQLKNGELQPLSQNTTLSFMATKMEDSGIYVCEGINEAGISKKSVELIIQGSSK 601 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,829,818 Number of Sequences: 219361 Number of extensions: 1075179 Number of successful extensions: 2736 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2679 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2722 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
