ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) ... 88 3e-14
2emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) ... 88 3e-14
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
4dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
5dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
6dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 g... 88 3e-14
7dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
8dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic ac... 88 3e-14
9gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2... 54 4e-04
10gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1... 54 4e-04
11gb|DQ078769.1| Zea mays clone Zmcoi6.12 cold-inducible unknown mRNA 54 4e-04
12gb|AY108052.1| Zea mays PCO079165 mRNA sequence 54 4e-04
13dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
14dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
15dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
16dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
17emb|X94105.1|CROYE C.rubrum mRNA for putative old yellow enzyme-... 44 0.40
18gb|AC009257.3|AC009257 Drosophila melanogaster, chromosome 2R, r... 44 0.40
19gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 44 0.40
20dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.40
21gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 44 0.40
22emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 ... 42 1.6
23emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 i... 42 1.6
24gb|AC156551.5| Mus musculus chromosome 8, clone RP23-348E18, com... 42 1.6
25dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
26dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
27emb|AL929444.6| Human DNA sequence from clone RP11-359B3 on chro... 40 6.3
28emb|AL160171.27| Human DNA sequence from clone RP11-256E16 on ch... 40 6.3
29emb|AL139330.17| Human DNA sequence from clone RP11-266C7 on chr... 40 6.3
30emb|AL121584.24|HSBA388K2 Human DNA sequence from clone RP11-388... 40 6.3
31emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA s... 40 6.3
32emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chrom... 40 6.3
33gb|AC123298.4| Rattus norvegicus BAC CH230-352N4 (Children's Ho... 40 6.3
34gb|AC115393.5| Rattus norvegicus BAC CH230-103E13 (Children's H... 40 6.3
35dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.3
36gb|AC068556.10| Homo sapiens chromosome 10 clone RP11-415G6, com... 40 6.3
37gb|AC068060.5| Homo sapiens chromosome 10 clone RP11-359B3, comp... 40 6.3
38gb|S75487.1| adh3a=alcohol dehydrogenase ADH, adh3b=alcohol dehy... 40 6.3
39emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m... 40 6.3
40emb|X63853.1|SCMATLOC S.cerevisiae MAT locus genes BUD5, mat-alp... 40 6.3
41emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chro... 40 6.3
42emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chro... 40 6.3
43gb|M60486.1|YSCTSM1A S.cerevisiae TSM1 gene, complete cds 40 6.3 
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for
           oxo-phytodienoic acid reductase (opda2 gene)
          Length = 1248

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                       
Query: 292 ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
           |||||||| |||| ||| ||||| || |||||||| |||||| | || || ||||| |||
Sbjct: 878 ttagccaagaagagcctcccataggcgacgagatcggcatagccatcagccaccaccttg 819

                                                       
Query: 352 ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
           || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 818 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 775
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>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid
            reductase (opda gene)
          Length = 1343

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 292  ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
            |||||||| |||| ||| ||||| || |||||||| |||||| | || || ||||| |||
Sbjct: 1034 ttagccaagaagagcctcccataggcgacgagatcggcatagccatcagccaccaccttg 975

                                                        
Query: 352  ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
            || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 974  ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 931
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                           
Query: 292     ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
               |||||||| |||| ||| ||||| || |||||||| |||||| | || || ||||| |||
Sbjct: 5929285 ttagccaagaagagcctcccataggcgacgagatcggcatagccatcagccaccaccttg 5929344

                                                           
Query: 352     ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
               || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 5929345 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 5929388



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                           
Query: 292     ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
               |||||||| |||| ||| || || || |||||||| |||||| | || || ||||| |||
Sbjct: 5924022 ttagccaagaagagcctcccgtaggcgacgagatcggcatagccatcagccaccaccttg 5924081

                                                           
Query: 352     ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
               || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 5924082 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 5924125



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 122/152 (80%)
 Strand = Plus / Plus

                                                                           
Query: 244     tacttgtttaaggctgaattgagctcgaatctcttaggaaaatctggattagccaaaaag 303
               ||||||||||| | || ||| |||||||| ||| | || || || || || ||||| |||
Sbjct: 5910480 tacttgtttaacggtgcattaagctcgaacctccttggcaagtcggggttggccaagaag 5910539

                                                                           
Query: 304     atccttccataagcaacgagatcagcatagtcgtcggcaaccactttgttgccttcctct 363
               | ||| ||||| || ||||| || |||||| | ||  | ||||| ||||| |||||||| 
Sbjct: 5910540 agcctcccataggcgacgaggtcggcatagccatcatccaccaccttgttcccttcctcc 5910599

                                               
Query: 364     cggtcataccctccagcagcaatgaaagtgcc 395
               |||||||||||||| |  ||||||||||||||
Sbjct: 5910600 cggtcataccctccggaggcaatgaaagtgcc 5910631



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                           
Query: 349     ttgttgccttcctctcggtcataccctccagcagcaatgaaagtgccgtcaaatgctttt 408
               |||||||||||||| ||||||||||| || || || ||||| ||||| |  || ||||| 
Sbjct: 5895802 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 5895861

                                   
Query: 409     ctgaagggcaggagcccgtg 428
               ||||| ||||| || |||||
Sbjct: 5895862 ctgaatggcagcaggccgtg 5895881



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                           
Query: 319     acgagatcagcatagtcgtcggcaaccactttgttgccttcctctcggtcataccctcca 378
               ||||| ||||||||  | ||||| | ||| ||||| |||||||| || || || ||||| 
Sbjct: 5905989 acgaggtcagcatatccatcggctatcaccttgtttccttcctcccgatcgtatcctccg 5906048

                                
Query: 379     gcagcaatgaaagtgcc 395
               ||||| |||||||||||
Sbjct: 5906049 gcagcgatgaaagtgcc 5906065
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>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                         
Query: 292   ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
             |||||||| |||| ||| ||||| || |||||||| |||||| | || || ||||| |||
Sbjct: 50937 ttagccaagaagagcctcccataggcgacgagatcggcatagccatcagccaccaccttg 50996

                                                         
Query: 352   ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
             || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 50997 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 51040



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                         
Query: 292   ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
             |||||||| |||| ||| || || || |||||||| |||||| | || || ||||| |||
Sbjct: 45674 ttagccaagaagagcctcccgtaggcgacgagatcggcatagccatcagccaccaccttg 45733

                                                         
Query: 352   ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
             || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 45734 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 45777



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 122/152 (80%)
 Strand = Plus / Plus

                                                                         
Query: 244   tacttgtttaaggctgaattgagctcgaatctcttaggaaaatctggattagccaaaaag 303
             ||||||||||| | || ||| |||||||| ||| | || || || || || ||||| |||
Sbjct: 32132 tacttgtttaacggtgcattaagctcgaacctccttggcaagtcggggttggccaagaag 32191

                                                                         
Query: 304   atccttccataagcaacgagatcagcatagtcgtcggcaaccactttgttgccttcctct 363
             | ||| ||||| || ||||| || |||||| | ||  | ||||| ||||| |||||||| 
Sbjct: 32192 agcctcccataggcgacgaggtcggcatagccatcatccaccaccttgttcccttcctcc 32251

                                             
Query: 364   cggtcataccctccagcagcaatgaaagtgcc 395
             |||||||||||||| |  ||||||||||||||
Sbjct: 32252 cggtcataccctccggaggcaatgaaagtgcc 32283



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                         
Query: 349   ttgttgccttcctctcggtcataccctccagcagcaatgaaagtgccgtcaaatgctttt 408
             |||||||||||||| ||||||||||| || || || ||||| ||||| |  || ||||| 
Sbjct: 17454 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 17513

                                 
Query: 409   ctgaagggcaggagcccgtg 428
             ||||| ||||| || |||||
Sbjct: 17514 ctgaatggcagcaggccgtg 17533



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 319   acgagatcagcatagtcgtcggcaaccactttgttgccttcctctcggtcataccctcca 378
             ||||| ||||||||  | ||||| | ||| ||||| |||||||| || || || ||||| 
Sbjct: 27641 acgaggtcagcatatccatcggctatcaccttgtttccttcctcccgatcgtatcctccg 27700

                              
Query: 379   gcagcaatgaaagtgcc 395
             ||||| |||||||||||
Sbjct: 27701 gcagcgatgaaagtgcc 27717
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0537F07
          Length = 147724

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                          
Query: 292    ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
              |||||||| |||| ||| ||||| || |||||||| |||||| | || || ||||| |||
Sbjct: 130060 ttagccaagaagagcctcccataggcgacgagatcggcatagccatcagccaccaccttg 130119

                                                          
Query: 352    ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
              || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 130120 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 130163



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                          
Query: 292    ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
              |||||||| |||| ||| || || || |||||||| |||||| | || || ||||| |||
Sbjct: 124797 ttagccaagaagagcctcccgtaggcgacgagatcggcatagccatcagccaccaccttg 124856

                                                          
Query: 352    ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
              || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 124857 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 124900



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 122/152 (80%)
 Strand = Plus / Plus

                                                                          
Query: 244    tacttgtttaaggctgaattgagctcgaatctcttaggaaaatctggattagccaaaaag 303
              ||||||||||| | || ||| |||||||| ||| | || || || || || ||||| |||
Sbjct: 111255 tacttgtttaacggtgcattaagctcgaacctccttggcaagtcggggttggccaagaag 111314

                                                                          
Query: 304    atccttccataagcaacgagatcagcatagtcgtcggcaaccactttgttgccttcctct 363
              | ||| ||||| || ||||| || |||||| | ||  | ||||| ||||| |||||||| 
Sbjct: 111315 agcctcccataggcgacgaggtcggcatagccatcatccaccaccttgttcccttcctcc 111374

                                              
Query: 364    cggtcataccctccagcagcaatgaaagtgcc 395
              |||||||||||||| |  ||||||||||||||
Sbjct: 111375 cggtcataccctccggaggcaatgaaagtgcc 111406



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                         
Query: 349   ttgttgccttcctctcggtcataccctccagcagcaatgaaagtgccgtcaaatgctttt 408
             |||||||||||||| ||||||||||| || || || ||||| ||||| |  || ||||| 
Sbjct: 96577 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 96636

                                 
Query: 409   ctgaagggcaggagcccgtg 428
             ||||| ||||| || |||||
Sbjct: 96637 ctgaatggcagcaggccgtg 96656



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                          
Query: 319    acgagatcagcatagtcgtcggcaaccactttgttgccttcctctcggtcataccctcca 378
              ||||| ||||||||  | ||||| | ||| ||||| |||||||| || || || ||||| 
Sbjct: 106764 acgaggtcagcatatccatcggctatcaccttgtttccttcctcccgatcgtatcctccg 106823

                               
Query: 379    gcagcaatgaaagtgcc 395
              ||||| |||||||||||
Sbjct: 106824 gcagcgatgaaagtgcc 106840
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>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1  gene for
            12-oxo-phytodienoic acid reductase, complete cds
          Length = 2492

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 292  ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
            |||||||| |||| ||| ||||| || |||||||| |||||| | || || ||||| |||
Sbjct: 2167 ttagccaagaagagcctcccataggcgacgagatcggcatagccatcagccaccaccttg 2108

                                                        
Query: 352  ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
            || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 2107 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 2064
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>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full
            insert sequence
          Length = 1520

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 292  ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
            |||||||| |||| ||| ||||| || |||||||| |||||| | || || ||||| |||
Sbjct: 1219 ttagccaagaagagcctcccataggcgacgagatcggcatagccatcagccaccaccttg 1160

                                                        
Query: 352  ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
            || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 1159 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 1116
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>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase,
            complete cds
          Length = 1384

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 292  ttagccaaaaagatccttccataagcaacgagatcagcatagtcgtcggcaaccactttg 351
            |||||||| |||| ||| ||||| || |||||||| |||||| | || || ||||| |||
Sbjct: 1072 ttagccaagaagagcctcccataggcgacgagatcggcatagccatcagccaccaccttg 1013

                                                        
Query: 352  ttgccttcctctcggtcataccctccagcagcaatgaaagtgcc 395
            || |||||||| ||||||||||| |||||||| |||||||||||
Sbjct: 1012 ttcccttcctcccggtcatacccgccagcagcgatgaaagtgcc 969
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>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds
          Length = 1409

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 193  taatttgtgtagccaacgataggatcttgcgtataaaaagtgttgcggtcgtacttgtt 251
            |||| |||||||||||| |||||||||||||| || || |||  ||||||||| |||||
Sbjct: 1173 taatctgtgtagccaacaataggatcttgcgtgtagaaggtggagcggtcgtatttgtt 1115
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>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds
          Length = 1465

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 193  taatttgtgtagccaacgataggatcttgcgtataaaaagtgttgcggtcgtacttgtt 251
            |||| |||||||||||| |||||||||||||| || || |||  ||||||||| |||||
Sbjct: 1185 taatctgtgtagccaacaataggatcttgcgtgtagaaggtggagcggtcgtatttgtt 1127
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>gb|DQ078769.1| Zea mays clone Zmcoi6.12 cold-inducible unknown mRNA
          Length = 336

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 193 taatttgtgtagccaacgataggatcttgcgtataaaaagtgttgcggtcgtacttgtt 251
           |||| |||||||||||| |||||||||||||| || || |||  ||||||||| |||||
Sbjct: 180 taatctgtgtagccaacaataggatcttgcgtgtagaaggtggagcggtcgtatttgtt 122
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>gb|AY108052.1| Zea mays PCO079165 mRNA sequence
          Length = 1489

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 193  taatttgtgtagccaacgataggatcttgcgtataaaaagtgttgcggtcgtacttgtt 251
            |||| |||||||||||| |||||||||||||| || || |||  ||||||||| |||||
Sbjct: 1209 taatctgtgtagccaacaataggatcttgcgtgtagaaggtggagcggtcgtatttgtt 1151
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>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full
            insert sequence
          Length = 1281

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                        
Query: 349  ttgttgccttcctctcggtcataccctccagcagcaatgaaagtgccgtcaaatgctttt 408
            |||||||||||||| ||||||||||| || || || ||||| ||||| |  || ||||| 
Sbjct: 1017 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 958

                                
Query: 409  ctgaagggcaggagcccgtg 428
            ||||| ||||| || |||||
Sbjct: 957  ctgaatggcagcaggccgtg 938
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>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full
            insert sequence
          Length = 1281

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                        
Query: 349  ttgttgccttcctctcggtcataccctccagcagcaatgaaagtgccgtcaaatgctttt 408
            |||||||||||||| ||||||||||| || || || ||||| ||||| |  || ||||| 
Sbjct: 1017 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 958

                                
Query: 409  ctgaagggcaggagcccgtg 428
            ||||| ||||| || |||||
Sbjct: 957  ctgaatggcagcaggccgtg 938
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>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full
            insert sequence
          Length = 1422

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                        
Query: 349  ttgttgccttcctctcggtcataccctccagcagcaatgaaagtgccgtcaaatgctttt 408
            |||||||||||||| ||||||||||| || || || ||||| ||||| |  || ||||| 
Sbjct: 1012 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 953

                                
Query: 409  ctgaagggcaggagcccgtg 428
            ||||| ||||| || |||||
Sbjct: 952  ctgaatggcagcaggccgtg 933
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>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full
            insert sequence
          Length = 1434

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                        
Query: 349  ttgttgccttcctctcggtcataccctccagcagcaatgaaagtgccgtcaaatgctttt 408
            |||||||||||||| ||||||||||| || || || ||||| ||||| |  || ||||| 
Sbjct: 1017 ttgttgccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttc 958

                                
Query: 409  ctgaagggcaggagcccgtg 428
            ||||| ||||| || |||||
Sbjct: 957  ctgaatggcagcaggccgtg 938
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>emb|X94105.1|CROYE C.rubrum mRNA for putative old yellow enzyme-NADPH dehydrogenase
          Length = 485

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 367 tcataccctccagcagcaatgaaagt 392
           ||||| ||||||||||||||||||||
Sbjct: 101 tcataacctccagcagcaatgaaagt 76



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 283 aaatctggattagccaaaaa 302
           ||||||||||||||||||||
Sbjct: 185 aaatctggattagccaaaaa 166
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>gb|AC009257.3|AC009257 Drosophila melanogaster, chromosome 2R, region 59D-59E, BAC clone
              BACR25I01, complete sequence
          Length = 218565

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 46     agtaaattattgggggaaatga 67
              ||||||||||||||||||||||
Sbjct: 146257 agtaaattattgggggaaatga 146236
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>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
            BACR48M01, complete sequence
          Length = 188272

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 46   agtaaattattgggggaaatga 67
            ||||||||||||||||||||||
Sbjct: 1563 agtaaattattgggggaaatga 1542
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>dbj|AB005242.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQK4
          Length = 82001

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 97    ctaaagaaaaatcattacatgttata 122
             |||||||||||||||| |||||||||
Sbjct: 18201 ctaaagaaaaatcatttcatgttata 18176
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
             sequence
          Length = 598988

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 46    agtaaattattgggggaaatga 67
             ||||||||||||||||||||||
Sbjct: 35103 agtaaattattgggggaaatga 35082
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>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3,
              complete sequence
          Length = 194437

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 98     taaagaaaaatcattacatgttatataaa 126
              ||||| ||||| |||||||||||||||||
Sbjct: 168527 taaagtaaaataattacatgttatataaa 168499
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>emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 in linkage group 3,
              complete sequence
          Length = 198900

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 98     taaagaaaaatcattacatgttatataaa 126
              ||||| ||||| |||||||||||||||||
Sbjct: 145069 taaagtaaaataattacatgttatataaa 145097
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>gb|AC156551.5| Mus musculus chromosome 8, clone RP23-348E18, complete sequence
          Length = 207944

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    aaatgatacaatgcaaatacc 82
             |||||||||||||||||||||
Sbjct: 95899 aaatgatacaatgcaaatacc 95919
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>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full
            insert sequence
          Length = 1311

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 319  acgagatcagcatagtcgtcggcaaccactttgttgccttcctctcggtcataccctcca 378
            ||||| ||||||||  | ||||| | ||| ||||| |||||||| || || || ||||| 
Sbjct: 1050 acgaggtcagcatatccatcggctatcaccttgtttccttcctcccgatcgtatcctccg 991

                             
Query: 379  gcagcaatgaaagtgcc 395
            ||||| |||||||||||
Sbjct: 990  gcagcgatgaaagtgcc 974
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>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full
            insert sequence
          Length = 1295

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 319  acgagatcagcatagtcgtcggcaaccactttgttgccttcctctcggtcataccctcca 378
            ||||| ||||||||  | ||||| | ||| ||||| |||||||| || || || ||||| 
Sbjct: 1033 acgaggtcagcatatccatcggctatcaccttgtttccttcctcccgatcgtatcctccg 974

                             
Query: 379  gcagcaatgaaagtgcc 395
            ||||| |||||||||||
Sbjct: 973  gcagcgatgaaagtgcc 957
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>emb|AL929444.6| Human DNA sequence from clone RP11-359B3 on chromosome 10 Contains a
             ribosomal protein S27 (metallopanstimulin 1) (MPS1, MPS-1)
             (RPS27) pseudogene, complete sequence
          Length = 50865

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    gacatactaaagaaaaatcattac 114
             ||||||||||| ||||||||||||
Sbjct: 47985 gacatactaaaaaaaaatcattac 47962
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>emb|AL160171.27| Human DNA sequence from clone RP11-256E16 on chromosome 1 Contains a
              novel gene, a novel gene (FLJ30525), the 5' end of a novel
              gene (FLJ10330) and a CpG island, complete sequence
          Length = 161273

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    gccaaaaagatccttccata 314
              ||||||||||||||||||||
Sbjct: 118414 gccaaaaagatccttccata 118395
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>emb|AL139330.17| Human DNA sequence from clone RP11-266C7 on chromosome 6q25.2-26
             Contains the SYNJ2 gene for synaptojanin 2 (inositol
             phosphate 5'-phosphatase 2, INPP5H) (contains FLJ23714 and
             DKFZp761E1512), a novel gene and the 3' end of the SNX9
             gene for sorting nexin 9 (SH3 and PX domain-containing
             protein (SH3PX1, SDP1), FLJ22984). Contains two CpG
             islands, complete sequence
          Length = 160974

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    gggaaatgatacaatgcaaa 78
             ||||||||||||||||||||
Sbjct: 41456 gggaaatgatacaatgcaaa 41475
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>emb|AL121584.24|HSBA388K2 Human DNA sequence from clone RP11-388K2 on chromosome 20 Contains part
             of the gene for a novel protein (LOC284776) and a putative
             novel gene, complete sequence
          Length = 145415

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ccttaaaacatatctcggcatatt 24
             |||||||||||||||| |||||||
Sbjct: 41073 ccttaaaacatatctctgcatatt 41050
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>emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA sequence
          Length = 316613

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      ccttaaaacatatctcggcatatt 24
              |||| |||||||||||||||||||
Sbjct: 201713 cctttaaacatatctcggcatatt 201736
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>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5
          Length = 281723

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    gaaaaatcattacatgttat 121
              ||||||||||||||||||||
Sbjct: 111936 gaaaaatcattacatgttat 111917
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>gb|AC123298.4| Rattus norvegicus  BAC CH230-352N4 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 175621

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     attgggggaaatgatacaat 73
              ||||||||||||||||||||
Sbjct: 143042 attgggggaaatgatacaat 143061
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>gb|AC115393.5| Rattus norvegicus  BAC CH230-103E13 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 243316

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    attgggggaaatgatacaat 73
             ||||||||||||||||||||
Sbjct: 30128 attgggggaaatgatacaat 30147
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 385     atgaaagtgccgtcaaatgc 404
               ||||||||||||||||||||
Sbjct: 3414981 atgaaagtgccgtcaaatgc 3414962
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>gb|AC068556.10| Homo sapiens chromosome 10 clone RP11-415G6, complete sequence
          Length = 182913

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    gacatactaaagaaaaatcattac 114
             ||||||||||| ||||||||||||
Sbjct: 99375 gacatactaaaaaaaaatcattac 99398
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>gb|AC068060.5| Homo sapiens chromosome 10 clone RP11-359B3, complete sequence
          Length = 182912

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    gacatactaaagaaaaatcattac 114
             ||||||||||| ||||||||||||
Sbjct: 83533 gacatactaaaaaaaaatcattac 83510
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>gb|S75487.1| adh3a=alcohol dehydrogenase ADH, adh3b=alcohol dehydrogenase  ADH
            [Lycopersicon esculentum=tomatoes, cv. red cherry,
            Genomic, 6282 nt]
          Length = 6282

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 111  ttacatgttatataaaccaaccaagtca 138
            |||||||||||| ||| |||||||||||
Sbjct: 5123 ttacatgttataaaaatcaaccaagtca 5150
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>emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m15, COMPLETE SEQUENCE
          Length = 141614

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 264   gagctcgaatctcttaggaaaatctggattag 295
             |||| |||||||||| || |||||||||||||
Sbjct: 70816 gagcgcgaatctctttggtaaatctggattag 70847
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>emb|X63853.1|SCMATLOC S.cerevisiae MAT locus genes BUD5, mat-alpha1, mat-alpha2, YCR724 and
            YCR725
          Length = 9818

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    ccttaaaacatatctcggcatatt 24
            |||| |||||||||||||||||||
Sbjct: 4620 cctttaaacatatctcggcatatt 4643
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>emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chromosome 3, complete
             sequence
          Length = 186605

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    tgcatagacatactaaagaa 104
             ||||||||||||||||||||
Sbjct: 56806 tgcatagacatactaaagaa 56825
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>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete
              sequence
          Length = 205436

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ggaaatgatacaatgcaaat 79
              ||||||||||||||||||||
Sbjct: 180416 ggaaatgatacaatgcaaat 180435
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>gb|M60486.1|YSCTSM1A S.cerevisiae TSM1 gene, complete cds
          Length = 4731

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    ccttaaaacatatctcggcatatt 24
            |||| |||||||||||||||||||
Sbjct: 3952 cctttaaacatatctcggcatatt 3929


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,943,104
Number of Sequences: 3902068
Number of extensions: 3943104
Number of successful extensions: 71650
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71540
Number of HSP's gapped (non-prelim): 110
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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