ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 60 4e-09
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 52 1e-06
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 40 0.003
4GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX) ... 33 0.47
5TGT_SYNEL (Q8CWM7) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)... 32 0.81
6TRPA_MYCTU (P66980) Tryptophan synthase alpha chain (EC 4.2.1.20) 31 1.4
7TRPA_MYCBO (P66981) Tryptophan synthase alpha chain (EC 4.2.1.20) 31 1.4
8NLTP_HUMAN (P22307) Nonspecific lipid-transfer protein, mitochon... 31 1.8
9NLTP_CHICK (Q07598) Nonspecific lipid-transfer protein, mitochon... 31 1.8
10BSN_MOUSE (O88737) Bassoon protein 30 3.1
11NLTP_RABIT (O62742) Nonspecific lipid-transfer protein, mitochon... 30 3.1
12NLTP_MOUSE (P32020) Nonspecific lipid-transfer protein, mitochon... 30 3.1
13NLTP_BOVIN (P07857) Nonspecific lipid-transfer protein, mitochon... 30 3.1
14AUR1_YEAST (P36107) Aureobasidin A resistance protein 30 4.0
15BSN_RAT (O88778) Bassoon protein 30 4.0
16COMD4_HUMAN (Q9H0A8) COMM domain-containing protein 4 29 5.2
17COMD4_BOVIN (Q5E9V6) COMM domain-containing protein 4 29 5.2
18TSN10_HUMAN (Q9H1Z9) Tetraspanin-10 (Tspan-10) (Oculospanin) 29 5.2
19TRPA_MYCPA (Q740P2) Tryptophan synthase alpha chain (EC 4.2.1.20) 29 5.2
20PIWI_BRARE (Q8UVX0) Piwi-like protein 1 29 6.8
21TSN10_MOUSE (Q8VCF5) Tetraspanin-10 (Tspan-10) (Oculospanin) 28 8.9
22NAS3_ORYSA (Q9FXW5) Nicotianamine synthase 3 (EC 2.5.1.43) (S-ad... 28 8.9
23NLTP_RAT (P11915) Nonspecific lipid-transfer protein, mitochondr... 28 8.9

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
 Frame = -1

Query: 448 NEPARYGFSASSGLHVCCGAGGPYNYNMTAACG---------LPGVSACDNPATHINWDG 296
           +EP ++GF     L  CCG GG YN+++TA CG            V +C  P+  +NWDG
Sbjct: 291 SEPEKHGFEFP--LITCCGYGGKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDG 348

Query: 295 IHLTESA----YRLIATGWLLGPLRTPAPIFKAMSGSLDLKTSSSI 170
            H TE+A    +  I+TG    P   P P+  A   +  L+T +S+
Sbjct: 349 AHYTEAANEYFFDQISTGAFSDP---PVPLNMACHKTESLRTLASV 391



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -1

Query: 433 YGFSASSGLHVCCGAGGPYNYNMTAACGLPGV---------SACDNPATHINWDGIHLTE 281
           +GF  S  L  CCG GG YNYN    CG+  +           CD P   + WDG+H T+
Sbjct: 294 HGFKGS--LVSCCGHGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQ 351

Query: 280 SAYRLI 263
           +A + I
Sbjct: 352 AANKFI 357



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 463 VIEFLNEPARYGFSASSGLHVCCGAGGPYNYNMTAACGLPGVSACDNPATHINWDGIHLT 284
           + + L  PA YGF  +     CC  G     +  A C       C N ++++ WDG+H T
Sbjct: 459 ISQMLETPAAYGFEETK--KPCCKTG---LLSAGALCKKSTSKICPNTSSYLFWDGVHPT 513

Query: 283 ESAYRLI 263
           + AY+ I
Sbjct: 514 QRAYKTI 520



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>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)|
           (Endo-1,4-beta-glucanase) (Cellulase) (Fragment)
          Length = 224

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -1

Query: 316 THINWDGIHLTESAYRLIATGWLLGPLRTPAPIFKAMSGSLDLKTSSS 173
           T I+WDG+HL+E  Y  IA  W     +    I KA++G      S S
Sbjct: 112 TDISWDGLHLSEIGYTKIANIW----YKYTIDILKALAGQTQPTPSPS 155



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>TGT_SYNEL (Q8CWM7) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)|
           (tRNA-guanine transglycosylase) (Guanine insertion
           enzyme)
          Length = 378

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -3

Query: 299 WHPPHGVCI*AHRHRLALGALTHTRAYFQGHVRISGSQDIFINLINQHLQP 147
           +H PHG    A    + +G L + +     H++ +G+Q I  N  + HLQP
Sbjct: 20  FHTPHGTV--ATPRFMPVGTLANVKTLTPEHLKAAGAQMILANTYHLHLQP 68



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>TRPA_MYCTU (P66980) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 270

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +2

Query: 266 EPICRLREVDAIPVDVRGGVIARAHARQPASRSHVVVIGPTCATAHVE 409
           E + R++ V  IPV V  GV +RA A Q A  +  V++G    TA  E
Sbjct: 201 ELVGRVKAVSDIPVGVGLGVRSRAQAAQIAQYADGVIVGSALVTALTE 248



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>TRPA_MYCBO (P66981) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 270

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +2

Query: 266 EPICRLREVDAIPVDVRGGVIARAHARQPASRSHVVVIGPTCATAHVE 409
           E + R++ V  IPV V  GV +RA A Q A  +  V++G    TA  E
Sbjct: 201 ELVGRVKAVSDIPVGVGLGVRSRAQAAQIAQYADGVIVGSALVTALTE 248



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>NLTP_HUMAN (P22307) Nonspecific lipid-transfer protein, mitochondrial|
           precursor (EC 2.3.1.176) (Propanoyl-CoA
           C-acyltransferase) (NSL-TP) (Sterol carrier protein 2)
           (SCP-2) (Sterol carrier protein X) (SCP-X) (SCP-chi)
           (SCPX)
          Length = 547

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 254 LALGALTHTRAYFQGHVRISGSQDIFINLINQHLQPNGCNL 132
           L  G +    A+FQG ++I+G+  + + L N  LQP    L
Sbjct: 507 LMTGKMNPQSAFFQGKLKITGNMGLAMKLQNLQLQPGNAKL 547



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>NLTP_CHICK (Q07598) Nonspecific lipid-transfer protein, mitochondrial|
           precursor (EC 2.3.1.176) (Propanoyl-CoA
           C-acyltransferase) (NSL-TP) (Sterol carrier protein 2)
           (SCP-2) (Sterol carrier protein X) (SCP-X) (SCP-chi)
           (SCPX) (Fragment)
          Length = 547

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 254 LALGALTHTRAYFQGHVRISGSQDIFINLINQHLQPNGCNL 132
           L  G +    A+FQG ++ISG+  + + L N  LQP    L
Sbjct: 507 LMTGKMNPQTAFFQGKLKISGNMGMAMKLQNLQLQPGKAKL 547



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>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -1

Query: 394 GAGGPYNYNMTAACGLPGVSACD-NPATHINWDGIHLTESAYRLIATGWLL-GPLRTPAP 221
           G+ GP NYN   AC L   + C  NP  H+    +  TE       T  LL G L  PAP
Sbjct: 473 GSRGPANYNTCTACKLQVCNLCGFNPTPHL----VEKTEWLCLNCQTKRLLEGSLGEPAP 528

Query: 220 I 218
           +
Sbjct: 529 L 529



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>NLTP_RABIT (O62742) Nonspecific lipid-transfer protein, mitochondrial|
           precursor (EC 2.3.1.176) (Propanoyl-CoA
           C-acyltransferase) (NSL-TP) (Sterol carrier protein 2)
           (SCP-2) (Sterol carrier protein X) (SCP-X) (SCP-chi)
           (SCPX)
          Length = 547

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 254 LALGALTHTRAYFQGHVRISGSQDIFINLINQHLQPNGCNL 132
           L  G +    A+FQG ++I+G+  + + L N  LQP    L
Sbjct: 507 LMTGKMNPQSAFFQGKLKITGNMGLAMKLQNLQLQPGKAKL 547



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>NLTP_MOUSE (P32020) Nonspecific lipid-transfer protein, mitochondrial|
           precursor (EC 2.3.1.176) (Propanoyl-CoA
           C-acyltransferase) (NSL-TP) (Sterol carrier protein 2)
           (SCP-2) (Sterol carrier protein X) (SCP-X) (SCP-chi)
           (SCPX)
          Length = 547

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 254 LALGALTHTRAYFQGHVRISGSQDIFINLINQHLQPNGCNL 132
           L  G +    A+FQG ++I+G+  + + L N  LQP    L
Sbjct: 507 LMTGKMNPQSAFFQGKLKIAGNMGLAMKLQNLQLQPGKAKL 547



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>NLTP_BOVIN (P07857) Nonspecific lipid-transfer protein, mitochondrial|
           precursor (EC 2.3.1.176) (Propanoyl-CoA
           C-acyltransferase) (NSL-TP) (Sterol carrier protein 2)
           (SCP-2) (Sterol carrier protein X) (SCP-X) (SCP-chi)
           (SCPX)
          Length = 543

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 254 LALGALTHTRAYFQGHVRISGSQDIFINLINQHLQPNGCNL 132
           L  G +    A+FQG ++I+G+  + + L N  LQP    L
Sbjct: 503 LMTGKMNPQTAFFQGKLKINGNMGLAMKLQNLQLQPGKAKL 543



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>AUR1_YEAST (P36107) Aureobasidin A resistance protein|
          Length = 401

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -1

Query: 142 AATSTLHVCYLFYKQAPHFLAKVCLRLWLSLCDTH 38
           A    L  CY F K  P F+A VC   W ++  TH
Sbjct: 259 ATMEALFFCYCFPKLKPLFIAYVCWLWWSTMYLTH 293



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>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -1

Query: 394 GAGGPYNYNMTAACGLPGVSACD-NPATHINWDGIHLTESAYRLIATGWLL-GPLRTPAP 221
           G+ GP NYN   AC L   + C  NP  H+    +  TE       T  LL G L  PAP
Sbjct: 471 GSRGPANYNTCTACKLRVCTLCGFNPTPHL----VEKTEWLCLNCQTKRLLEGSLGEPAP 526

Query: 220 I 218
           +
Sbjct: 527 L 527



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>COMD4_HUMAN (Q9H0A8) COMM domain-containing protein 4|
          Length = 199

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 165 YKIDEDVLRS-RDPDMALKIGAGVRKGPKSQPVAMSLYADSVRWMPSQL 308
           Y +   +L+S  +P + L++      G  +QPVAMSL AD  + + ++L
Sbjct: 140 YTLSSSLLQSVEEPMVHLRLEVAAAPGTPAQPVAMSLSADKFQVLLAEL 188



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>COMD4_BOVIN (Q5E9V6) COMM domain-containing protein 4|
          Length = 199

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
 Frame = +3

Query: 126 RVEVAAVRLKMLI-------YKIDEDVLRS-RDPDMALKIGAGVRKGPKSQPVAMSLYAD 281
           R+   ++R+  L+       Y +   +LR+  +P + L++      G  +QPVAMSL AD
Sbjct: 120 RLRACSLRVNRLVXVGWRVDYTLSSSLLRTVEEPLVHLRLEVAASPGAPAQPVAMSLSAD 179

Query: 282 SVRWMPSQL 308
             + + + L
Sbjct: 180 KFQVLLADL 188



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>TSN10_HUMAN (Q9H1Z9) Tetraspanin-10 (Tspan-10) (Oculospanin)|
          Length = 355

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -1

Query: 466 PVIEFLNEPARYGFSASSGLHVCCGAGG--PYNYNMTAACGLPGVSACDNPAT 314
           P + FL +  + G         CCGA     +  N+   C  PGV AC  PA+
Sbjct: 197 PDLRFLLDQVQLGLR-------CCGAASYQDWQQNLYFNCSSPGVQACSLPAS 242



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>TRPA_MYCPA (Q740P2) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 271

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 266 EPICRLREVDAIPVDVRGGVIARAHARQPASRSHVVVIGPTCATA 400
           E + R+RE+  IPV V  GV +R  A Q    +  V++G    +A
Sbjct: 200 ELVSRVREISDIPVGVGLGVRSREQAAQIGGYADGVIVGSALVSA 244



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>PIWI_BRARE (Q8UVX0) Piwi-like protein 1|
          Length = 858

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -2

Query: 225 RLFSRPCQDLWISRHLHQSYKSTSSTERLQPLLCMYATCSINKLHTF 85
           RL SRP   +W     H  YK    + RL+  L      ++ K HTF
Sbjct: 118 RLLSRP---MWALYQYHVDYKPPMESRRLRSALLFQHEETLGKAHTF 161



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>TSN10_MOUSE (Q8VCF5) Tetraspanin-10 (Tspan-10) (Oculospanin)|
          Length = 331

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -1

Query: 466 PVIEFLNEPARYGFSASSGLHVCCGAGG--PYNYNMTAACGLPGVSACDNPAT 314
           P + FL +  + G         CCGA     +  N+   C  PGV AC  PA+
Sbjct: 195 PDLHFLLDQVQLGLQ-------CCGAVSYQDWQQNLYFNCSSPGVQACSLPAS 240



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>NAS3_ORYSA (Q9FXW5) Nicotianamine synthase 3 (EC 2.5.1.43)|
           (S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-
           adenosyl-methionine 3-amino-3-carboxypropyltransferase
           3) (OsNAS3)
          Length = 343

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = -2

Query: 282 SLHIGSSPPV-------GSWGPYAHPRLFSRPCQDLWISRHLHQSYKSTSSTERL 139
           S+ I   PPV       G    + H  + SRPCQ   +    HQ  +  S+ E+L
Sbjct: 286 SVIIARKPPVAAPALEGGDAHAHGHGAVVSRPCQRCEMEARAHQKMEDMSAMEKL 340



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>NLTP_RAT (P11915) Nonspecific lipid-transfer protein, mitochondrial|
           precursor (EC 2.3.1.176) (Propanoyl-CoA
           C-acyltransferase) (NSL-TP) (Sterol carrier protein 2)
           (SCP-2) (Sterol carrier protein X) (SCP-X) (SCP-chi)
           (SCPX)
          Length = 547

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 254 LALGALTHTRAYFQGHVRISGSQDIFINLINQHLQPNGCNL 132
           L  G +    A+FQG ++I+G+  + + L +  LQP+   L
Sbjct: 507 LMTGKMNPQSAFFQGKLKIAGNMGLAMKLQSLQLQPDKAKL 547


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,920,945
Number of Sequences: 219361
Number of extensions: 1508479
Number of successful extensions: 4060
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4057
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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