>LAR_DESUN (Q84V83) Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin|
           reductase)
          Length = 382

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 292 CCSS*DAWPWRDGCHPQK 239
           CC+S  +WP+ D CHP +
Sbjct: 160 CCNSIASWPYYDNCHPSQ 177

>EFGL_MYCTU (O07170) Elongation factor G-like protein|
          Length = 714

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = +3

Query: 111 CSSNTPLLFTFTEPTYDKKQGLNCSVASWDGSNRPQ-----SIHFFSSFWGWQPSLHGQA 275
           C ++ PLL    + T D   G    V  + G+ RP      S HF S F G   + H   
Sbjct: 309 CDNDAPLLAEVVKTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGGTSNTHPDH 368

Query: 276 SYDEQHDVL 302
             DE+  VL
Sbjct: 369 DEDERIGVL 377

>AXUD1_HUMAN (Q96S65) Axin-1 up-regulated gene 1 protein (TGF-beta-induced|
           apoptosis protein 3) (TAIP-3) (URAX1 protein)
          Length = 589

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = -3

Query: 261 ETAAIPRRKKKNGCSVDDCCHPSLLHYSLALVSCHMLVL*M*IVVGCCCCR--CSDMLWQ 88
           E  A+ + ++  GC  D  C P     SLA + C M          C CCR  C + + +
Sbjct: 226 ELQALRQSREDCGCHCDRICDPETCSCSLAGIKCQM----DHTAFPCGCCREGCENPMGR 281

Query: 87  LHF 79
           + F
Sbjct: 282 VEF 284

>YDHH_ECOLI (P77570) Hypothetical UPF0075 protein ydhH|
          Length = 369

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 277 DAWPWRDGCHPQKEEKKWMLCGRLLPSQLATLQFSPCF 164
           DAW WR    P  ++ +W   G+++   L  +   P F
Sbjct: 196 DAWIWRQAGKPYDKDAEWARAGKVILPLLQNMLSDPYF 233

>L_PI3H4 (P12577) Large structural protein (Protein L) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2233

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/79 (24%), Positives = 33/79 (41%)
 Frame = +3

Query: 12   PTIEYKKYIIEAQRSFKNIFKHQNATATTYLNICSSNTPLLFTFTEPTYDKKQGLNCSVA 191
            PT++Y +      +SF +   +   TA  YL I   + P +    +P  D+    N    
Sbjct: 1652 PTLKYVQISGLLIKSFPSTVTYVRKTAIKYLRIRGISPPEVIDDWDPIEDENMLDNIVKT 1711

Query: 192  SWDGSNRPQSIHFFSSFWG 248
              D  N+    +  ++FWG
Sbjct: 1712 INDNCNKDNKGNKINNFWG 1730

>SSG1B_HORVU (Q8LL05) Granule-bound starch synthase 1b, chloroplast precursor|
           (EC 2.4.1.242) (Granule-bound starch synthase Ib)
           (Fragment)
          Length = 565

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 45  AQRSFKNIFKHQNATATTYLNICSSNTPLLFTFTE 149
           A+R   N   H+N++ T+   +CS+  P++F  TE
Sbjct: 12  AKRRATNYETHRNSSRTSSPIVCSTGMPIIFVATE 46

>RAB5_TOBAC (P29687) Ras-related protein Rab5|
          Length = 200

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -2

Query: 367 QQAQNPQAGMVLSQRPAERMVSSTSCCS 284
           Q AQNP AGMVL  +PA+    + SCC+
Sbjct: 175 QPAQNP-AGMVLEDKPAQGS-QAASCCT 200

>RNPB_PHYPO (P81477) Ribonuclease Phyb (EC 3.1.27.-) (RNase Phyb)|
          Length = 180

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 234 SSFWGWQPSLHGQASYDEQHDVLLTILS 317
           +SFW  + S HG  S   +HD   T+LS
Sbjct: 69  ASFWSHEWSKHGTCSGYAEHDFFATVLS 96

>YC03_KLEPN (Q48449) Hypothetical 55.8 kDa protein in cps region (ORF3)|
          Length = 504

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 135 FTFTEPTYDKKQGLNCSVASWDGSNRPQSIHFFSSFW 245
           FTFT P    + G +  +  W G  RPQS   FSSFW
Sbjct: 268 FTFT-PFQSLELGAS-RIMQWGGEGRPQS---FSSFW 299

>PTSS1_CRIGR (Q00576) Phosphatidylserine synthase 1 (EC 2.7.8.-) (PtdSer|
           synthase 1) (PSS-1) (Serine-exchange enzyme I)
          Length = 471

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 174 LNCSVASWDGSNRPQSIHFFSSFWGW 251
           +NC V +W+       I  F  FWGW
Sbjct: 151 VNCHVITWERIVSHFDIFAFGHFWGW 176

>PTSS1_MOUSE (Q99LH2) Phosphatidylserine synthase 1 (EC 2.7.8.-) (PtdSer|
           synthase 1) (PSS-1) (Serine-exchange enzyme I)
          Length = 473

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 174 LNCSVASWDGSNRPQSIHFFSSFWGW 251
           +NC V +W+       I  F  FWGW
Sbjct: 151 VNCHVITWERIVSHFDIFAFGHFWGW 176

>PTSS1_HUMAN (P48651) Phosphatidylserine synthase 1 (EC 2.7.8.-) (PtdSer|
           synthase 1) (PSS-1) (Serine-exchange enzyme I)
          Length = 473

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 174 LNCSVASWDGSNRPQSIHFFSSFWGW 251
           +NC V +W+       I  F  FWGW
Sbjct: 151 VNCHVITWERIISHFDIFAFGHFWGW 176

>LUXS_LISMF (Q720D3) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2|
           production protein luxS) (AI-2 synthesis protein)
          Length = 155

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 246 GWQPSLHGQASYDEQHDVLLTILSAGLCESTIPACGFCACCPASS 380
           G+  S    + YD+  +++ T L+  L  + +PAC    C  A+S
Sbjct: 85  GFYVSFINHSDYDDALEIIATTLTDVLAATEVPACNEVQCGWAAS 129

>LUXS_LISIN (Q92C64) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2|
           production protein luxS) (AI-2 synthesis protein)
          Length = 155

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 246 GWQPSLHGQASYDEQHDVLLTILSAGLCESTIPACGFCACCPASS 380
           G+  S      YD+  ++L T L+  L   ++PAC    C  A+S
Sbjct: 85  GFYMSFINHNDYDDALEILATTLTDVLAADSVPACNEVQCGWAAS 129

>KUP2_LACLA (Q9CHU4) Probable potassium transport system protein kup 2|
          Length = 671

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +2

Query: 32  IYNRSAKVIQKYI*APKCNCHNISEHLQQ----QHPTTIHIYRTNI 157
           I+N+S K++ KYI        NI+E+  Q    +H  +  +Y+TN+
Sbjct: 444 IWNKSHKIVMKYI-----KSLNINEYKNQLNALRHDESYDLYQTNV 484


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,569,528
Number of Sequences: 219361
Number of extensions: 1117114
Number of successful extensions: 3046
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3042
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)