Clone Name | rbart30b07 |
---|---|
Clone Library Name | barley_pub |
>gb|AF112964.1|AF112964 Triticum aestivum small GTP-binding protein (Sgp) mRNA, complete cds Length = 1136 Score = 264 bits (133), Expect = 2e-67 Identities = 152/157 (96%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 67 tatttaagcaccaaaatgcaactgccacaacatatctgaacatctgcagcagcaacaccc 126 ||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 1108 tatttaagcaccagaatgca-ctgcaacaacatatctgaacatctgcagcagcaacaccc 1050 Query: 127 cactactattcacatttacagaaccaacatatgacaagaaacaagggctaaactgtagtg 186 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1049 cactactattcacatttacagaaccaacatatgacaagaaacaagggctagactgtagtg 990 Query: 187 tagcaagctgggatggcagcaatcgtccacagagcat 223 |||||||||||||||||||||||||||||||| |||| Sbjct: 989 tagcaagctgggatggcagcaatcgtccacagcgcat 953 Score = 222 bits (112), Expect = 6e-55 Identities = 127/132 (96%) Strand = Plus / Minus Query: 248 atggcagccgtctctccacggccaagcatcctatgatgagcagcacgacgtgctgctcac 307 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 atggcggccgtctctccacggccaagcatcctatgatgagcagcacgacgtgctgctcac 856 Query: 308 catcctctcggctggtctctgcgaaagcaccatccctgcctgcgggttctgcgcctgctg 367 |||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 855 catcctctcggccggtctctgtgagagcaccatccccgcctgcgggttctgcgcctgctg 796 Query: 368 ccccgcgagcag 379 |||||||||||| Sbjct: 795 ccccgcgagcag 784
>emb|AJ292320.1|OSA292320 Oryza sativa mRNA for RAB5A protein Length = 969 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 283 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 328 |||||||||| || | ||||||||||||||||| ||||||||||| Sbjct: 787 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 742 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tattcacatttacagaaccaacat 156 |||||||||||||||||| ||||| Sbjct: 948 tattcacatttacagaacgaacat 925
>gb|AY029301.1| Oryza sativa small GTP-binding protein (rab5A) mRNA, complete cds Length = 1125 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 283 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 328 |||||||||| || | ||||||||||||||||| ||||||||||| Sbjct: 787 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 742 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tattcacatttacagaaccaacat 156 |||||||||||||||||| ||||| Sbjct: 948 tattcacatttacagaacgaacat 925
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 283 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 328 |||||||||| || | ||||||||||||||||| ||||||||||| Sbjct: 27061028 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 27060983 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tattcacatttacagaaccaacat 156 |||||||||||||||||| ||||| Sbjct: 27061186 tattcacatttacagaacgaacat 27061163
>dbj|AK061116.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E04, full insert sequence Length = 1043 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 283 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 328 |||||||||| || | ||||||||||||||||| ||||||||||| Sbjct: 788 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 743 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tattcacatttacagaaccaacat 156 |||||||||||||||||| ||||| Sbjct: 946 tattcacatttacagaacgaacat 923
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 283 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 328 |||||||||| || | ||||||||||||||||| ||||||||||| Sbjct: 26986617 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 26986572 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tattcacatttacagaaccaacat 156 |||||||||||||||||| ||||| Sbjct: 26986775 tattcacatttacagaacgaacat 26986752
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 283 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 328 |||||||||| || | ||||||||||||||||| ||||||||||| Sbjct: 95209 atgagcagcatgaagaactgctcaccatcctctcagctggtctctg 95254 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 tattcacatttacagaaccaacat 156 |||||||||||||||||| ||||| Sbjct: 95051 tattcacatttacagaacgaacat 95074
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 ttgaatataaaaaatatataat 40 |||||||||||||||||||||| Sbjct: 15840075 ttgaatataaaaaatatataat 15840054
>dbj|AP005512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012O03 Length = 141860 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 ttgaatataaaaaatatataat 40 |||||||||||||||||||||| Sbjct: 20118 ttgaatataaaaaatatataat 20097
>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0404D10 Length = 155069 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 ttgaatataaaaaatatataat 40 |||||||||||||||||||||| Sbjct: 154531 ttgaatataaaaaatatataat 154510
>dbj|AK066784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078I11, full insert sequence Length = 1032 Score = 44.1 bits (22), Expect = 0.32 Identities = 40/46 (86%) Strand = Plus / Minus Query: 283 atgagcagcacgacgtgctgctcaccatcctctcggctggtctctg 328 |||||||||| || | |||||||||| |||||| ||||||||||| Sbjct: 720 atgagcagcatgaagaactgctcaccaccctctcagctggtctctg 675 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tattcacatttacagaaccaacat 156 |||||||||||||||||| ||||| Sbjct: 878 tattcacatttacagaacgaacat 855
>gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosome 16, complete sequence Length = 193718 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 tgaatataaaaaatatataat 40 ||||||||||||||||||||| Sbjct: 54994 tgaatataaaaaatatataat 55014
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 tctgcgcctgctgccccgcga 375 ||||||||||||||||||||| Sbjct: 2154084 tctgcgcctgctgccccgcga 2154064
>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence Length = 198030 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 actgtagtgtagcaagctggg 198 ||||||||||||||||||||| Sbjct: 32763 actgtagtgtagcaagctggg 32743
>ref|XM_673008.1| Plasmodium berghei strain ANKA hypothetical protein (PB001093.01.0) partial mRNA Length = 1776 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 cattgaatataaaaaatatataatc 41 ||||||||||| ||||||||||||| Sbjct: 999 cattgaatatataaaatatataatc 975
>emb|AL359877.12| Human DNA sequence from clone RP11-179A4 on chromosome 9 Contains part of the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 164008 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 caacatatgacaagaaacaag 171 ||||||||||||||||||||| Sbjct: 85207 caacatatgacaagaaacaag 85187
>ref|XM_782786.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC582848 (LOC582848), mRNA Length = 2754 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 tgaatataaaaaatatataat 40 ||||||||||||||||||||| Sbjct: 2692 tgaatataaaaaatatataat 2672
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 tctgcgcctgctgccccgcga 375 ||||||||||||||||||||| Sbjct: 315712 tctgcgcctgctgccccgcga 315692
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 gctgggatggcagcaatcgtccaca 217 |||| |||||||||||||||||||| Sbjct: 173736 gctgcgatggcagcaatcgtccaca 173760
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttgaatataaaaaatatataa 39 ||||||||||||||||||||| Sbjct: 118494 ttgaatataaaaaatatataa 118514
>gb|AC103602.12| Mus musculus chromosome 1, clone RP24-234P21, complete sequence Length = 158510 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 attcaaaaatatatttaagca 76 ||||||||||||||||||||| Sbjct: 64599 attcaaaaatatatttaagca 64619
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 tctgcgcctgctgccccgcga 375 ||||||||||||||||||||| Sbjct: 2008933 tctgcgcctgctgccccgcga 2008953
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttgaatataaaaaatatataa 39 ||||||||||||||||||||| Sbjct: 22781298 ttgaatataaaaaatatataa 22781318
>ref|XM_226078.3| PREDICTED: Rattus norvegicus similar to hypothetical protein 2610304F09 (predicted) (LOC307527), mRNA Length = 3540 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ctctccacggccaagcatcct 279 ||||||||||||||||||||| Sbjct: 2280 ctctccacggccaagcatcct 2300
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence Length = 174449 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 actgtagtgtagcaagctggg 198 ||||||||||||||||||||| Sbjct: 100222 actgtagtgtagcaagctggg 100202
>emb|AL731646.8| Human DNA sequence from clone RP13-487A15 on chromosome 9, complete sequence Length = 47572 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 caacatatgacaagaaacaag 171 ||||||||||||||||||||| Sbjct: 10272 caacatatgacaagaaacaag 10252
>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete sequence Length = 271546 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tgaatataaaaaatatataa 39 |||||||||||||||||||| Sbjct: 160354 tgaatataaaaaatatataa 160373
>gb|AE014852.2| Plasmodium falciparum 3D7 chromosome 12, section 9 of 9 of the complete sequence Length = 260929 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gaatataaaaaatatataat 40 |||||||||||||||||||| Sbjct: 103377 gaatataaaaaatatataat 103396
>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete sequence Length = 250713 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ataaaaaatatataatcgaa 44 |||||||||||||||||||| Sbjct: 150490 ataaaaaatatataatcgaa 150509
>gb|AC003959.1| Homo sapiens chromosome 5, P1 clone 1029A7 (LBNL H15), complete sequence Length = 83684 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 72142 aatataaaaaatatataatc 72161
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tcattcaaaaatatatttaa 73 |||||||||||||||||||| Sbjct: 2838263 tcattcaaaaatatatttaa 2838244
>gb|AC009905.12| Drosophila melanogaster clone BACR21E16, complete sequence Length = 170662 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 attgaatataaaaaatatat 37 |||||||||||||||||||| Sbjct: 116397 attgaatataaaaaatatat 116378
>gb|AC125322.4| Mus musculus BAC clone RP23-407J24 from chromosome 7, complete sequence Length = 217912 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 actattcacatttacagaac 150 |||||||||||||||||||| Sbjct: 140761 actattcacatttacagaac 140780
>ref|XM_756980.1| Ustilago maydis 521 hypothetical protein (UM05926.1) partial mRNA Length = 999 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cggctggtctctgcgaaagc 335 |||||||||||||||||||| Sbjct: 237 cggctggtctctgcgaaagc 218
>emb|BX927125.18| Zebrafish DNA sequence from clone CH211-122L24 in linkage group 2, complete sequence Length = 165489 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 agaaacaagggctaaactgt 182 |||||||||||||||||||| Sbjct: 166 agaaacaagggctaaactgt 185
>ref|XM_735108.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300772.00.0) partial mRNA Length = 1221 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 attgaatataaaaaatatataatc 41 ||||||||||| |||||||||||| Sbjct: 1001 attgaatataacaaatatataatc 978
>gb|AC004014.2| Homo sapiens BAC clone CTB-22K14 from 7, complete sequence Length = 172241 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gaatataaaaaatatataat 40 |||||||||||||||||||| Sbjct: 26376 gaatataaaaaatatataat 26395
>emb|CR936500.10| Zebrafish DNA sequence from clone DKEY-274N8 in linkage group 3, complete sequence Length = 86479 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gaatataaaaaatatataat 40 |||||||||||||||||||| Sbjct: 6134 gaatataaaaaatatataat 6115
>emb|CR759881.16| Zebrafish DNA sequence from clone CH211-165K16 in linkage group 18, complete sequence Length = 123400 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ttgaatataaaaaatatata 38 |||||||||||||||||||| Sbjct: 82101 ttgaatataaaaaatatata 82082
>gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete sequence Length = 106528 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 42463 aatataaaaaatatataatc 42444
>emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chromosome 1 Contains part of the DISC1 gene for disrupted in schizophrenia 1 and a novel gene, complete sequence Length = 98151 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttgaatataaaaaatatata 38 |||||||||||||||||||| Sbjct: 7293 ttgaatataaaaaatatata 7312
>gb|AY290734.1| Triticum aestivum putative lipase-like mRNA, partial sequence Length = 686 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 cgcctgctgccccgcgagca 378 |||||||||||||||||||| Sbjct: 289 cgcctgctgccccgcgagca 270
>emb|BX855620.10| Zebrafish DNA sequence from clone DKEY-9M4 in linkage group 15, complete sequence Length = 33169 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gaatataaaaaatatataat 40 |||||||||||||||||||| Sbjct: 18414 gaatataaaaaatatataat 18395
>emb|BX927391.6| Zebrafish DNA sequence from clone CH211-213B8 in linkage group 1, complete sequence Length = 146449 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 acaacatatctgaacatctg 112 |||||||||||||||||||| Sbjct: 37774 acaacatatctgaacatctg 37755
>emb|BX294152.1| Pirellula sp. strain 1 complete genome; segment 20/24 Length = 304250 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agcaccaaaatgcaactgcc 92 |||||||||||||||||||| Sbjct: 300570 agcaccaaaatgcaactgcc 300551
>emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3 Length = 67970 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tgaatataaaaaatatataa 39 |||||||||||||||||||| Sbjct: 25049 tgaatataaaaaatatataa 25068
>emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin Length = 294540 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 cattgaatataaaaaatatataat 40 |||||||| ||||||||||||||| Sbjct: 150007 cattgaatttaaaaaatatataat 149984
>emb|AL713721.1|HSM803094 Homo sapiens genomic DNA; cDNA DKFZp667M0716 (from clone DKFZp667M0716) Length = 2553 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 2318 aatataaaaaatatataatc 2337
>gb|AC163891.2| Glomus intraradices clone JGIATSX-5O22, complete sequence Length = 42612 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 gcctgcgggttctgcgcctg 364 |||||||||||||||||||| Sbjct: 27770 gcctgcgggttctgcgcctg 27789
>gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, complete sequence Length = 160042 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 19388 aatataaaaaatatataatc 19407
>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence Length = 169385 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 84351 aatataaaaaatatataatc 84370
>gb|DQ378286.1| Drosophila virilis strain Tucson 15010-1001.10 fosmids 22L1 and 42E12, complete sequence Length = 68774 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 attgaatataaaaaatatat 37 |||||||||||||||||||| Sbjct: 21098 attgaatataaaaaatatat 21117
>gb|AC114284.2| Homo sapiens chromosome 5 clone CTD-2334D19, complete sequence Length = 126480 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttgaatataaaaaatatata 38 |||||||||||||||||||| Sbjct: 92311 ttgaatataaaaaatatata 92330
>gb|L81752.1|HUM15DC95S Homo sapiens (subclone 8_d10 from P1 H15) DNA sequence Length = 4452 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 4374 aatataaaaaatatataatc 4393
>gb|AC015726.8| Homo sapiens chromosome , clone RP11-78O7, complete sequence Length = 134680 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 attgaatataaaaaatatat 37 |||||||||||||||||||| Sbjct: 117653 attgaatataaaaaatatat 117634
>gb|AC156609.8| Mus musculus chromosome 15, clone RP23-56E21, complete sequence Length = 118659 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cattcaaaaatatatttaag 74 |||||||||||||||||||| Sbjct: 73681 cattcaaaaatatatttaag 73662
>gb|AC010121.7|AC010121 Drosophila melanogaster, chromosome 2L, region 36C-36D, BAC clone BACR07M13, complete sequence Length = 172529 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 attgaatataaaaaatatat 37 |||||||||||||||||||| Sbjct: 2750 attgaatataaaaaatatat 2731
>gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chromosome unknown, complete sequence Length = 232130 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 80819 aatataaaaaatatataatc 80838
>gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, complete sequence Length = 177476 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 cattgaatataaaaaatatataat 40 |||||||| ||||||||||||||| Sbjct: 104406 cattgaatttaaaaaatatataat 104429
>emb|BX648423.1|HSM808571 Homo sapiens mRNA; cDNA DKFZp686D10250 (from clone DKFZp686D10250) Length = 3800 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 3528 aatataaaaaatatataatc 3547
>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete sequence Length = 223392 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 ccaaaatgcaactgccacaacata 100 ||||||||||||||||| |||||| Sbjct: 62320 ccaaaatgcaactgccaaaacata 62343
>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15 Length = 83865 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 7784 aatataaaaaatatataatc 7803
>dbj|AK129632.1| Homo sapiens cDNA FLJ26121 fis, clone SYN00535 Length = 2426 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 2208 aatataaaaaatatataatc 2227
>emb|AL450003.2|HS62F24 Homo sapiens chromosome 9 BAC RP11-62F24, complete sequence Length = 160737 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 43606 aatataaaaaatatataatc 43587
>gb|AC154712.2| Mus musculus BAC clone RP24-359J22 from 16, complete sequence Length = 144031 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gaatataaaaaatatataat 40 |||||||||||||||||||| Sbjct: 75244 gaatataaaaaatatataat 75225
>emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 in linkage group 18, complete sequence Length = 183462 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 150394 aatataaaaaatatataatc 150375
>emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 in linkage group 18, complete sequence Length = 150831 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 45940 aatataaaaaatatataatc 45921
>emb|BX571719.3| Zebrafish DNA sequence from clone DKEY-183C2 in linkage group 4, complete sequence Length = 111614 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttgaatataaaaaatatata 38 |||||||||||||||||||| Sbjct: 34885 ttgaatataaaaaatatata 34904
>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the complete sequence Length = 253771 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 attgaatataaaaaatatat 37 |||||||||||||||||||| Sbjct: 6927 attgaatataaaaaatatat 6908
>gb|AC138678.24| Mus musculus chromosome 7, clone RP23-18B20, complete sequence Length = 205257 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatataaaaaatatataatc 41 |||||||||||||||||||| Sbjct: 190452 aatataaaaaatatataatc 190471
>emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in linkage group 17, complete sequence Length = 156881 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 attgaatataaaaaatatat 37 |||||||||||||||||||| Sbjct: 32483 attgaatataaaaaatatat 32502
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tattcacatttacagaaccaacat 156 |||||||||||||||||| ||||| Sbjct: 74 tattcacatttacagaacgaacat 51
>emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 in linkage group 17, complete sequence Length = 154493 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 attgaatataaaaaatatat 37 |||||||||||||||||||| Sbjct: 74538 attgaatataaaaaatatat 74519
>gb|M19173.1|PFARGEB P.falciparum 18S ribosomal RNA not in asexual parasites Length = 2040 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tgaatataaaaaatatataa 39 |||||||||||||||||||| Sbjct: 1153 tgaatataaaaaatatataa 1172
>emb|AL929365.1|PF13PB1 Plasmodium falciparum chromosome 13, unmapped contig Length = 18168 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tgaatataaaaaatatataa 39 |||||||||||||||||||| Sbjct: 7919 tgaatataaaaaatatataa 7900
>dbj|AB022280.1| Oryzias latipes gene for soluble guanylyl cyclase alpha subunit, complete cds Length = 16504 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aaaaatatatttaagcacca 79 |||||||||||||||||||| Sbjct: 10730 aaaaatatatttaagcacca 10749
>emb|AL772361.5| Mouse DNA sequence from clone RP23-136C22 on chromosome 2, complete sequence Length = 128685 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atatatttaagcaccaaaat 83 |||||||||||||||||||| Sbjct: 47261 atatatttaagcaccaaaat 47242 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,693,664 Number of Sequences: 3902068 Number of extensions: 4693664 Number of successful extensions: 128985 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128368 Number of HSP's gapped (non-prelim): 616 length of query: 380 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 358 effective length of database: 17,147,199,772 effective search space: 6138697518376 effective search space used: 6138697518376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)