ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 70 1e-12
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 53 2e-07
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 48 5e-06
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 44 1e-04
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 42 3e-04
6CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 41 8e-04
7CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.009
8CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.009
9CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 37 0.012
10CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 35 0.035
11CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 35 0.060
12CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 32 0.39
13CONB_CANEN (P49347) Concanavalin B precursor (Con B) 32 0.39
14CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Solub... 30 1.1
15HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.... 30 1.5
16SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protei... 29 3.3
17MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 28 4.3
18LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precurso... 28 4.3
19GLYG2_SOYBN (P04405) Glycinin G2 precursor [Contains: Glycinin A... 28 4.3
20LDLR2_XENLA (Q99088) Low-density lipoprotein receptor 2 precurso... 27 9.6
21CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14) 27 9.6

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = -3

Query: 341 YLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189
           Y+GL A ++   +VHPKN+YYGV  V QK  NYGG+M+W+RY  K+TNYSS
Sbjct: 248 YVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
 Frame = -3

Query: 341 YLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSSYAIQWA 171
           YLGL A+    K   V  K LYY ++  VQKA NYGG+M+W+R+  K+T Y      WA
Sbjct: 246 YLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = -3

Query: 341 YLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYS 192
           Y+GL AS EQ   ++  K+LYY ++Q V+   NYGG+ +++RY  K+ NY+
Sbjct: 237 YIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189
           +LGLPA+ +  G  YV P  L   ++  ++K+  YGGVM+W ++   +  YSS
Sbjct: 241 FLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189
           +LGLPA+ +  G  Y+ P  L   ++  ++K+  YGGVM+W ++   +  YSS
Sbjct: 244 FLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189
           ++GLPAS    G  ++    L   ++ V++++  YGGVM+W +Y   ++ YSS
Sbjct: 243 FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSSYAI 180
           +LG+PAS    G  ++    L   V+  ++ ++ YGGVM+W+R+   ++ YS   I
Sbjct: 240 FLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = -3

Query: 341 YLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189
           +LG+PAS+      G +    L   V+  ++ +  YGGVM+W+R+   ++ YS+
Sbjct: 234 FLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189
           Y+GLPA++   G  Y+  + L   V+  ++ ++ YGGVM+W R    +  YSS
Sbjct: 236 YIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 35.4 bits (80), Expect = 0.035
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = -3

Query: 341 YLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWER 219
           Y+GLPA+ +     G++    L   V+  ++ ++NYGGVM+W +
Sbjct: 234 YMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSK 277



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 34.7 bits (78), Expect = 0.060
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189
           +LGLPAS    G  ++    L   V+  ++ +A YGGVM+W +  A  + YSS
Sbjct: 237 FLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSK--AYDSGYSS 287



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERY 216
           +LGLPA++   G  ++    L   V+ ++  +  YGGVM+W ++
Sbjct: 235 FLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKF 278



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = -3

Query: 341 YLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEAKRTNYSSYAIQW 174
           +L LPAS+      GY+ P  L   V+  +      Y G+ +W R   K T YS+  I++
Sbjct: 248 FLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307



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>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall|
           protein 2)
          Length = 562

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEA 210
           +LGLP S    G  Y+   +L    I  +  ++++GG+ +W+  +A
Sbjct: 245 FLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWDASQA 290



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>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 350

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252
           A  +++GYVHP   YYG +  VQ A
Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126



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>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal|
           with SEC13 protein 1)
          Length = 929

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
 Frame = -2

Query: 180 PMGLTLRRSDRHR--------VDLLYPSVYXXXXXXCLLPLQ*ISIASVKLCA 46
           PMG   +RSD +         VD L PS+Y       LLPL  + +  V L A
Sbjct: 257 PMGPNGQRSDLNEKSELLHGTVDFLVPSIYNAIQEKELLPLHYVFLIDVSLLA 309



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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -2

Query: 303  RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187
            RSS  P  RR  GGA GG   RG G   L+  A  ++ L
Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064



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>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor|
           1)
          Length = 909

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTN 198
           HP  LY  +  V+     +GG +VW+ +  K TN
Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867



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>GLYG2_SOYBN (P04405) Glycinin G2 precursor [Contains: Glycinin A2 subunit;|
           Glycinin B1a subunit]
          Length = 485

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -1

Query: 334 GCRRQSRRSVTFIQRTFITASYRWCRRRPTMAGSWSGNVTRPSGQITAVTPSNGLDPPSL 155
           GC+RQS+RS   I  T  T      R R  +  + S ++  P  Q  ++T +  LD P+L
Sbjct: 290 GCQRQSKRSRNGIDETICT-----MRLRQNIGQNSSPDIYNP--QAGSITTATSLDFPAL 342



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>LDLR2_XENLA (Q99088) Low-density lipoprotein receptor 2 precursor (LDL receptor|
           2)
          Length = 892

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTN 198
           HP  LY  +  ++    ++GG ++W+ +  K TN
Sbjct: 817 HPTALYIVLPILILCLVSFGGFLLWKNWRLKNTN 850



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>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 542

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEA 210
           GYV    L   V  +  K ++YGGV VW+  +A
Sbjct: 265 GYVPMSTLQTIVPSLASKYSSYGGVSVWDASQA 297


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,134,194
Number of Sequences: 219361
Number of extensions: 870428
Number of successful extensions: 2715
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2715
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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