Clone Name | rbart30a12 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 70.5 bits (171), Expect = 1e-12 Identities = 30/51 (58%), Positives = 39/51 (76%) Frame = -3 Query: 341 YLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189 Y+GL A ++ +VHPKN+YYGV V QK NYGG+M+W+RY K+TNYSS Sbjct: 248 YVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 52.8 bits (125), Expect = 2e-07 Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 2/59 (3%) Frame = -3 Query: 341 YLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSSYAIQWA 171 YLGL A+ K V K LYY ++ VQKA NYGG+M+W+R+ K+T Y WA Sbjct: 246 YLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 48.1 bits (113), Expect = 5e-06 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%) Frame = -3 Query: 341 YLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYS 192 Y+GL AS EQ ++ K+LYY ++Q V+ NYGG+ +++RY K+ NY+ Sbjct: 237 YIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 43.5 bits (101), Expect = 1e-04 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189 +LGLPA+ + G YV P L ++ ++K+ YGGVM+W ++ + YSS Sbjct: 241 FLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189 +LGLPA+ + G Y+ P L ++ ++K+ YGGVM+W ++ + YSS Sbjct: 244 FLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 40.8 bits (94), Expect = 8e-04 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189 ++GLPAS G ++ L ++ V++++ YGGVM+W +Y ++ YSS Sbjct: 243 FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSSYAI 180 +LG+PAS G ++ L V+ ++ ++ YGGVM+W+R+ ++ YS I Sbjct: 240 FLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Frame = -3 Query: 341 YLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189 +LG+PAS+ G + L V+ ++ + YGGVM+W+R+ ++ YS+ Sbjct: 234 FLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 37.0 bits (84), Expect = 0.012 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189 Y+GLPA++ G Y+ + L V+ ++ ++ YGGVM+W R + YSS Sbjct: 236 YIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 35.4 bits (80), Expect = 0.035 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = -3 Query: 341 YLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWER 219 Y+GLPA+ + G++ L V+ ++ ++NYGGVM+W + Sbjct: 234 YMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSK 277
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 34.7 bits (78), Expect = 0.060 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTNYSS 189 +LGLPAS G ++ L V+ ++ +A YGGVM+W + A + YSS Sbjct: 237 FLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSK--AYDSGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 32.0 bits (71), Expect = 0.39 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERY 216 +LGLPA++ G ++ L V+ ++ + YGGVM+W ++ Sbjct: 235 FLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKF 278
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 32.0 bits (71), Expect = 0.39 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Frame = -3 Query: 341 YLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEAKRTNYSSYAIQW 174 +L LPAS+ GY+ P L V+ + Y G+ +W R K T YS+ I++ Sbjct: 248 FLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEA 210 +LGLP S G Y+ +L I + ++++GG+ +W+ +A Sbjct: 245 FLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWDASQA 290
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal| with SEC13 protein 1) Length = 929 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%) Frame = -2 Query: 180 PMGLTLRRSDRHR--------VDLLYPSVYXXXXXXCLLPLQ*ISIASVKLCA 46 PMG +RSD + VD L PS+Y LLPL + + V L A Sbjct: 257 PMGPNGQRSDLNEKSELLHGTVDFLVPSIYNAIQEKELLPLHYVFLIDVSLLA 309
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -2 Query: 303 RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187 RSS P RR GGA GG RG G L+ A ++ L Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064
>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor| 1) Length = 909 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTN 198 HP LY + V+ +GG +VW+ + K TN Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867
>GLYG2_SOYBN (P04405) Glycinin G2 precursor [Contains: Glycinin A2 subunit;| Glycinin B1a subunit] Length = 485 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/60 (33%), Positives = 30/60 (50%) Frame = -1 Query: 334 GCRRQSRRSVTFIQRTFITASYRWCRRRPTMAGSWSGNVTRPSGQITAVTPSNGLDPPSL 155 GC+RQS+RS I T T R R + + S ++ P Q ++T + LD P+L Sbjct: 290 GCQRQSKRSRNGIDETICT-----MRLRQNIGQNSSPDIYNP--QAGSITTATSLDFPAL 342
>LDLR2_XENLA (Q99088) Low-density lipoprotein receptor 2 precursor (LDL receptor| 2) Length = 892 Score = 27.3 bits (59), Expect = 9.6 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = -3 Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEAKRTN 198 HP LY + ++ ++GG ++W+ + K TN Sbjct: 817 HPTALYIVLPILILCLVSFGGFLLWKNWRLKNTN 850
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEA 210 GYV L V + K ++YGGV VW+ +A Sbjct: 265 GYVPMSTLQTIVPSLASKYSSYGGVSVWDASQA 297 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,134,194 Number of Sequences: 219361 Number of extensions: 870428 Number of successful extensions: 2715 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2647 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2715 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)