ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC153623.8| Mus musculus 6 BAC RP23-459F14 (Roswell Park Canc... 44 0.12
2gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, compl... 42 0.48
3gb|AC115483.2| Drosophila melanogaster clone BACR20D18, complete... 40 1.9
4gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genom... 40 1.9
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 1.9
6ref|XM_646586.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 1.9
7emb|AL512592.14| Human DNA sequence from clone RP11-35D6 on chro... 40 1.9
8ref|XM_776886.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 1.9
9emb|CR354539.13| Zebrafish DNA sequence from clone CH211-250O1 i... 40 1.9
10gb|AC105021.6| Homo sapiens chromosome 17, clone CTD-2033D24, co... 40 1.9
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
12gb|AC009837.13| Homo sapiens chromosome 17, clone RP11-550K23, c... 40 1.9
13dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.9
14gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49... 40 1.9
15emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chr... 40 1.9
16dbj|AP004373.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 1.9
17ref|NM_114533.2| Arabidopsis thaliana UDP-glycosyltransferase/ t... 38 7.4
18ref|NM_114534.3| Arabidopsis thaliana UDP-glycosyltransferase/ t... 38 7.4
19gb|AC159250.2| Mus musculus BAC clone RP24-196J19 from chromosom... 38 7.4
20gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence 38 7.4
21gb|AC096672.14| Trypanosoma brucei chromosome 4 clone RPCI93-24M... 38 7.4
22gb|AC166156.4| Mus musculus BAC clone RP24-274H19 from chromosom... 38 7.4
23gb|AC119893.9| Mus musculus chromosome 1, clone RP24-225A6, comp... 38 7.4
24gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosom... 38 7.4
25emb|CR812847.5| Zebrafish DNA sequence from clone DKEY-9I15 in l... 38 7.4
26emb|CR956355.2| Pan troglodytes chromosome X BAC RP43-051D20, co... 38 7.4
27ref|XM_674453.1| Plasmodium berghei strain ANKA hypothetical pro... 38 7.4
28emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chr... 38 7.4
29emb|AL445439.9| Human DNA sequence from clone RP11-357P24 on chr... 38 7.4
30emb|AL358944.12| Human DNA sequence from clone RP4-562D20 on chr... 38 7.4
31gb|AF533976.1| Oreochromis niloticus unknown sequence 38 7.4
32gb|BT000356.1| Arabidopsis thaliana glucosyltransferase-like pro... 38 7.4
33gb|AY117336.1| Arabidopsis thaliana putative glucosyltransferase... 38 7.4
34gb|AY080716.1| Arabidopsis thaliana putative glucosyltransferase... 38 7.4
35emb|AL596166.1| Listeria innocua Clip11262 complete genome, segm... 38 7.4
36emb|CR759811.8| Zebrafish DNA sequence from clone CH211-190M18 i... 38 7.4
37emb|CR391919.5| Zebrafish DNA sequence from clone DKEY-174K18 in... 38 7.4
38gb|AY120731.1| Arabidopsis thaliana glucosyltransferase-like pro... 38 7.4
39gb|AC073174.5| Homo sapiens chromosome 10 clone RP11-319F12, com... 38 7.4
40dbj|AB076248.1| Mus musculus DNA, BAC clone:No.251,465 38 7.4
41gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, com... 38 7.4
42gb|AY048297.1| Arabidopsis thaliana AT3g46660/F12A12_180 mRNA, c... 38 7.4
43gb|AC156948.10| Mus musculus 10 BAC RP24-347D15 (Roswell Park Ca... 38 7.4
44emb|BX649624.8| Mouse DNA sequence from clone RP23-263M8 on chro... 38 7.4
45emb|BX823420.1|CNS0A7QM Arabidopsis thaliana Full-length cDNA Co... 38 7.4
46emb|BX823179.1|CNS0A76C Arabidopsis thaliana Full-length cDNA Co... 38 7.4
47gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, comple... 38 7.4
48gb|AY084880.1| Arabidopsis thaliana clone 120105 mRNA, complete ... 38 7.4
49gb|BT002638.1| Arabidopsis thaliana At3g46660/F12A12_180 gene, c... 38 7.4
50dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 38 7.4
51emb|BX649364.3| Human DNA sequence from clone RP5-997I15 on chro... 38 7.4
52emb|BX640519.2| Human DNA sequence from clone RP11-157L8 on chro... 38 7.4
53emb|AL671630.10| Mouse DNA sequence from clone RP23-327E13 on ch... 38 7.4
54dbj|AK117305.1| Arabidopsis thaliana mRNA for unknown protein, c... 38 7.4
55tpe|BN000065.1|HSA000065 TPA: TPA_inf: Homo sapiens SMP1 gene, R... 38 7.4
56emb|AL935195.14| Zebrafish DNA sequence from clone CH211-277C7 i... 38 7.4
57gb|AY846874.1| Mus musculus macoilin short isoform mRNA, complet... 38 7.4
58gb|AY846873.1| Mus musculus macoilin long isoform mRNA, complete... 38 7.4
59emb|BX000453.8| Zebrafish DNA sequence from clone DKEY-157G7 in ... 38 7.4
60emb|BX293548.5| Mouse DNA sequence from clone RP23-417K1 on chro... 38 7.4
61emb|AL031284.9|HS469D22 Human DNA sequence from clone RP3-469D22... 38 7.4
62emb|AL133314.1|ATF12A12 Arabidopsis thaliana DNA chromosome 3, B... 38 7.4
63emb|CT030206.8| Mouse DNA sequence from clone RP23-100I15 on chr... 38 7.4
64emb|AL611963.24| Mouse DNA sequence from clone RP23-79J18 on chr... 38 7.4
65emb|AL669911.16| Mouse DNA sequence from clone RP23-65G8 on chro... 38 7.4
66gb|AC159813.2| Mus musculus BAC clone RP23-386L9 from chromosome... 38 7.4 
>gb|AC153623.8| Mus musculus 6 BAC RP23-459F14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205825

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 33     ttgtttccgaaaaataaacatt 54
              ||||||||||||||||||||||
Sbjct: 119861 ttgtttccgaaaaataaacatt 119840
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>gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, complete sequence
          Length = 174162

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 24    gttatttctttgtttccgaaaaata 48
             ||||||||||||||||| |||||||
Sbjct: 54178 gttatttctttgtttcctaaaaata 54154
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>gb|AC115483.2| Drosophila melanogaster clone BACR20D18, complete sequence
          Length = 158241

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     cgaaaaataaacattacagtatat 63
              |||||||||||||||||| |||||
Sbjct: 139453 cgaaaaataaacattacaatatat 139476
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>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete
             sequence
          Length = 141582

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 77    atttttacccttttctcacggcacaaaggcagcaaacagctaca 120
             |||||||||| |||||||| || ||||||||| |||||| ||||
Sbjct: 99535 atttttaccc-tttctcacagctcaaaggcagaaaacagttaca 99493
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Plus

                                                            
Query: 77       atttttacccttttctcacggcacaaaggcagcaaacagctaca 120
                ||||||||||| ||||||| || ||||||||| |||||| ||||
Sbjct: 32780006 atttttaccct-ttctcacagctcaaaggcagaaaacagttaca 32780048
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>ref|XM_646586.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (152.t00006)
           partial mRNA
          Length = 1329

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 19  ccattgttatttctttgttt 38
           ||||||||||||||||||||
Sbjct: 343 ccattgttatttctttgttt 362
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>emb|AL512592.14| Human DNA sequence from clone RP11-35D6 on chromosome 6 Contains part
             of a novel gene (FLJ00197), complete sequence
          Length = 60858

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 42    aaaaataaacattacagtatatac 65
             ||||||||| ||||||||||||||
Sbjct: 39287 aaaaataaaaattacagtatatac 39310
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>ref|XM_776886.1| PREDICTED: Strongylocentrotus purpuratus similar to Lon protease
           homolog, mitochondrial precursor (Lon protease-like
           protein) (LONP) (LONHs) (LOC576598), mRNA
          Length = 2241

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 acagctacaaattccagtat 131
           ||||||||||||||||||||
Sbjct: 914 acagctacaaattccagtat 895
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>emb|CR354539.13| Zebrafish DNA sequence from clone CH211-250O1 in linkage group 13,
              complete sequence
          Length = 145294

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     aataaacattacagtatata 64
              ||||||||||||||||||||
Sbjct: 115300 aataaacattacagtatata 115281
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>gb|AC105021.6| Homo sapiens chromosome 17, clone CTD-2033D24, complete sequence
          Length = 143552

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   cagcaaacagctacaaattccagt 129
             |||||||||||||||||| |||||
Sbjct: 98610 cagcaaacagctacaaataccagt 98587
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Plus

                                                            
Query: 77       atttttacccttttctcacggcacaaaggcagcaaacagctaca 120
                |||||||||| |||||||| || ||||||||| |||||| ||||
Sbjct: 32870516 atttttaccc-tttctcacagctcaaaggcagaaaacagttaca 32870558
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>gb|AC009837.13| Homo sapiens chromosome 17, clone RP11-550K23, complete sequence
          Length = 168509

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 106  cagcaaacagctacaaattccagt 129
            |||||||||||||||||| |||||
Sbjct: 1522 cagcaaacagctacaaataccagt 1499
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>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full
            insert sequence
          Length = 1408

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                        
Query: 77   atttttacccttttctcacggcacaaaggcagcaaacagctaca 120
            |||||||||| |||||||| || ||||||||| |||||| ||||
Sbjct: 1356 atttttaccc-tttctcacagctcaaaggcagaaaacagttaca 1314
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>gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49 of 83 of the complete
              sequence
          Length = 271118

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     cgaaaaataaacattacagtatat 63
              |||||||||||||||||| |||||
Sbjct: 195750 cgaaaaataaacattacaatatat 195727
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>emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chromosome 4, complete
             sequence
          Length = 114436

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    aatccattgttatttctttg 35
             ||||||||||||||||||||
Sbjct: 15428 aatccattgttatttctttg 15447
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>dbj|AP004373.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L13, complete
            sequences
          Length = 96727

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   caatccattgttatttcttt 34
            ||||||||||||||||||||
Sbjct: 6551 caatccattgttatttcttt 6532
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>ref|NM_114533.2| Arabidopsis thaliana UDP-glycosyltransferase/ transferase,
            transferring glycosyl groups AT3G46660 mRNA, complete cds
          Length = 1824

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 111  aacagctacaaattccagt 129
            |||||||||||||||||||
Sbjct: 1000 aacagctacaaattccagt 1018
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>ref|NM_114534.3| Arabidopsis thaliana UDP-glycosyltransferase/ transferase,
           transferring glycosyl groups AT3G46670 mRNA, complete
           cds
          Length = 1732

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 844 aacagctacaaattccagt 862
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>gb|AC159250.2| Mus musculus BAC clone RP24-196J19 from chromosome 12, complete
             sequence
          Length = 193510

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    ataaacattacagtatata 64
             |||||||||||||||||||
Sbjct: 97769 ataaacattacagtatata 97787
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>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 97      gcacaaaggcagcaaacagctac 119
               ||||||||||||| |||||||||
Sbjct: 1572989 gcacaaaggcagccaacagctac 1572967
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>gb|AC096672.14| Trypanosoma brucei chromosome 4 clone RPCI93-24M18, complete sequence
          Length = 158627

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 97     gcacaaaggcagcaaacagctac 119
              ||||||||||||| |||||||||
Sbjct: 141184 gcacaaaggcagccaacagctac 141162
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>gb|AC166156.4| Mus musculus BAC clone RP24-274H19 from chromosome 3, complete sequence
          Length = 176294

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 110    aaacagctacaaattccag 128
              |||||||||||||||||||
Sbjct: 141334 aaacagctacaaattccag 141352
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>gb|AC119893.9| Mus musculus chromosome 1, clone RP24-225A6, complete sequence
          Length = 179453

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   acagctacaaattccagta 130
             |||||||||||||||||||
Sbjct: 75959 acagctacaaattccagta 75977
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>gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosome 3, complete sequence
          Length = 230133

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 110    aaacagctacaaattccag 128
              |||||||||||||||||||
Sbjct: 225395 aaacagctacaaattccag 225413
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>emb|CR812847.5| Zebrafish DNA sequence from clone DKEY-9I15 in linkage group 14,
             complete sequence
          Length = 230522

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    tttctcacggcacaaaggc 106
             |||||||||||||||||||
Sbjct: 12885 tttctcacggcacaaaggc 12903
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>emb|CR956355.2| Pan troglodytes chromosome X BAC RP43-051D20, complete sequence
          Length = 185393

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 15    caatccattgttatttctttgtt 37
             |||||||| ||||||||||||||
Sbjct: 74645 caatccatggttatttctttgtt 74667
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>ref|XM_674453.1| Plasmodium berghei strain ANKA hypothetical protein (PB000791.03.0)
            partial mRNA
          Length = 11355

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 24   gttatttctttgtttccgaaaaa 46
            ||||||||| |||||||||||||
Sbjct: 7502 gttatttctatgtttccgaaaaa 7524
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>emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chromosome 13 Contains
            the 5' end of a novel gene (contains KIAA0564 and
            FLJ21779) possible ortholog of RIKEN cDNA 1300010F03
            gene, a lysyl-tRNA synthetase (KARS) pseudogene, a
            ribosomal protein S28 (RPS28) pseudogene and 2 CpG
            islands, complete sequence
          Length = 163511

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 42   aaaaataaacattacagta 60
            |||||||||||||||||||
Sbjct: 3038 aaaaataaacattacagta 3020
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>emb|AL445439.9| Human DNA sequence from clone RP11-357P24 on chromosome 6 Contains the
             5' end of the LAMA2 gene for laminin, alpha 2 (merosin,
             congenital muscular dystrophy) (LAMM) and a mesoderm
             specific transcript homolog (mouse) (MEST) (PEG1)
             pseudogene, complete sequence
          Length = 167025

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    cattgttatttctttgttt 38
             |||||||||||||||||||
Sbjct: 36979 cattgttatttctttgttt 36997
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>emb|AL358944.12| Human DNA sequence from clone RP4-562D20 on chromosome 11 Contains the
             FSHB gene for follicle stimulating hormone beta
             polypeptide, ESTs, STSs and GSSs, complete sequence
          Length = 115865

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 87    ttttctcacggcacaaagg 105
             |||||||||||||||||||
Sbjct: 96173 ttttctcacggcacaaagg 96155
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>gb|AF533976.1| Oreochromis niloticus unknown sequence
          Length = 99935

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    gaaaaataaacattacagt 59
             |||||||||||||||||||
Sbjct: 95128 gaaaaataaacattacagt 95146
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>gb|BT000356.1| Arabidopsis thaliana glucosyltransferase-like protein (At3g46660)
           mRNA, complete cds
          Length = 1411

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 695 aacagctacaaattccagt 713
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>gb|AY117336.1| Arabidopsis thaliana putative glucosyltransferase (At3g46670) mRNA,
           complete cds
          Length = 1387

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 674 aacagctacaaattccagt 692
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>gb|AY080716.1| Arabidopsis thaliana putative glucosyltransferase (At3g46670) mRNA,
           complete cds
          Length = 1689

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 843 aacagctacaaattccagt 861
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>emb|AL596166.1| Listeria innocua Clip11262 complete genome, segment 4/12
          Length = 260050

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    atttctttgtttccgaaaa 45
             |||||||||||||||||||
Sbjct: 63607 atttctttgtttccgaaaa 63589
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>emb|CR759811.8| Zebrafish DNA sequence from clone CH211-190M18 in linkage group 13,
             complete sequence
          Length = 132853

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    ttgttatttctttgtttcc 40
             |||||||||||||||||||
Sbjct: 60357 ttgttatttctttgtttcc 60375
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>emb|CR391919.5| Zebrafish DNA sequence from clone DKEY-174K18 in linkage group 1,
             complete sequence
          Length = 179764

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    ccattgttatttctttgtt 37
             |||||||||||||||||||
Sbjct: 77504 ccattgttatttctttgtt 77522
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>gb|AY120731.1| Arabidopsis thaliana glucosyltransferase-like protein (At3g46660)
           mRNA, complete cds
          Length = 1562

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 737 aacagctacaaattccagt 755
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>gb|AC073174.5| Homo sapiens chromosome 10 clone RP11-319F12, complete sequence
          Length = 161551

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 106    cagcaaacagctacaaatt 124
              |||||||||||||||||||
Sbjct: 144005 cagcaaacagctacaaatt 144023
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>dbj|AB076248.1| Mus musculus DNA, BAC clone:No.251,465
          Length = 158570

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 21    attgttatttctttgtttccgaa 43
             ||||| |||||||||||||||||
Sbjct: 93584 attgtcatttctttgtttccgaa 93562
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>gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, complete sequence
          Length = 212598

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 111   aacagctacaaattccagt 129
             |||||||||||||||||||
Sbjct: 82803 aacagctacaaattccagt 82821
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>gb|AY048297.1| Arabidopsis thaliana AT3g46660/F12A12_180 mRNA, complete cds
          Length = 1572

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 838 aacagctacaaattccagt 856
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>gb|AC156948.10| Mus musculus 10 BAC RP24-347D15 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 181617

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    gaaaaataaacattacagt 59
             |||||||||||||||||||
Sbjct: 73651 gaaaaataaacattacagt 73633
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>emb|BX649624.8| Mouse DNA sequence from clone RP23-263M8 on chromosome X, complete
             sequence
          Length = 167883

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    cattgttatttctttgttt 38
             |||||||||||||||||||
Sbjct: 26784 cattgttatttctttgttt 26802
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>emb|BX823420.1|CNS0A7QM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS37ZD02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 918

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 191 aacagctacaaattccagt 209
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>emb|BX823179.1|CNS0A76C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB95ZF09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1638

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 749 aacagctacaaattccagt 767
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>gb|AC019055.6| Homo sapiens BAC clone RP11-111P18 from 2, complete sequence
          Length = 176383

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     cattgttatttctttgttt 38
              |||||||||||||||||||
Sbjct: 164954 cattgttatttctttgttt 164972
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>gb|AY084880.1| Arabidopsis thaliana clone 120105 mRNA, complete sequence
          Length = 1596

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 763 aacagctacaaattccagt 781
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>gb|BT002638.1| Arabidopsis thaliana At3g46660/F12A12_180 gene, complete cds
          Length = 1377

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 695 aacagctacaaattccagt 713
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     tcacggcacaaaggcagca 110
              |||||||||||||||||||
Sbjct: 512636 tcacggcacaaaggcagca 512654
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>emb|BX649364.3| Human DNA sequence from clone RP5-997I15 on chromosome 1, complete
            sequence
          Length = 124581

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 21   attgttatttctttgtttccgaa 43
            ||||| |||||||||||||||||
Sbjct: 8900 attgtcatttctttgtttccgaa 8878
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>emb|BX640519.2| Human DNA sequence from clone RP11-157L8 on chromosome 1, complete
              sequence
          Length = 186829

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 21     attgttatttctttgtttccgaa 43
              ||||| |||||||||||||||||
Sbjct: 128440 attgtcatttctttgtttccgaa 128462
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>emb|AL671630.10| Mouse DNA sequence from clone RP23-327E13 on chromosome X, complete
              sequence
          Length = 173634

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     cattgttatttctttgttt 38
              |||||||||||||||||||
Sbjct: 117504 cattgttatttctttgttt 117522
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>dbj|AK117305.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone:
           RAFL16-86-M01
          Length = 2026

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 111 aacagctacaaattccagt 129
           |||||||||||||||||||
Sbjct: 947 aacagctacaaattccagt 929
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>tpe|BN000065.1|HSA000065 TPA: TPA_inf: Homo sapiens SMP1 gene, RHD gene and RHCE gene
          Length = 315242

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 21     attgttatttctttgtttccgaa 43
              ||||| |||||||||||||||||
Sbjct: 292010 attgtcatttctttgtttccgaa 292032
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>emb|AL935195.14| Zebrafish DNA sequence from clone CH211-277C7 in linkage group 14,
            complete sequence
          Length = 194053

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 88   tttctcacggcacaaaggc 106
            |||||||||||||||||||
Sbjct: 8218 tttctcacggcacaaaggc 8200
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>gb|AY846874.1| Mus musculus macoilin short isoform mRNA, complete cds
          Length = 2491

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 21 attgttatttctttgtttccgaa 43
          ||||| |||||||||||||||||
Sbjct: 30 attgtcatttctttgtttccgaa 52
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>gb|AY846873.1| Mus musculus macoilin long isoform mRNA, complete cds
          Length = 3844

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 21 attgttatttctttgtttccgaa 43
          ||||| |||||||||||||||||
Sbjct: 30 attgtcatttctttgtttccgaa 52
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>emb|BX000453.8| Zebrafish DNA sequence from clone DKEY-157G7 in linkage group 7,
             complete sequence
          Length = 163585

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    cattgttatttctttgttt 38
             |||||||||||||||||||
Sbjct: 88579 cattgttatttctttgttt 88597
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>emb|BX293548.5| Mouse DNA sequence from clone RP23-417K1 on chromosome 2, complete
              sequence
          Length = 195079

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 17     atccattgttatttctttgtttc 39
              ||||| |||||||||||||||||
Sbjct: 163595 atccaatgttatttctttgtttc 163573
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>emb|AL031284.9|HS469D22 Human DNA sequence from clone RP3-469D22 on chromosome 1p35.1-36.13,
             complete sequence
          Length = 84811

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 21    attgttatttctttgtttccgaa 43
             ||||| |||||||||||||||||
Sbjct: 61579 attgtcatttctttgtttccgaa 61601
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>emb|AL133314.1|ATF12A12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12A12
          Length = 100815

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   aacagctacaaattccagt 129
             |||||||||||||||||||
Sbjct: 92579 aacagctacaaattccagt 92561



 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   aacagctacaaattccagt 129
             |||||||||||||||||||
Sbjct: 89190 aacagctacaaattccagt 89172
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>emb|CT030206.8| Mouse DNA sequence from clone RP23-100I15 on chromosome 12, complete
              sequence
          Length = 201135

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     ataaacattacagtatata 64
              |||||||||||||||||||
Sbjct: 175169 ataaacattacagtatata 175151
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>emb|AL611963.24| Mouse DNA sequence from clone RP23-79J18 on chromosome 4, complete
             sequence
          Length = 222196

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 21    attgttatttctttgtttccgaa 43
             ||||| |||||||||||||||||
Sbjct: 13881 attgtcatttctttgtttccgaa 13859
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>emb|AL669911.16| Mouse DNA sequence from clone RP23-65G8 on chromosome 11, complete
              sequence
          Length = 205030

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 109    caaacagctacaaattcca 127
              |||||||||||||||||||
Sbjct: 148035 caaacagctacaaattcca 148017
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>gb|AC159813.2| Mus musculus BAC clone RP23-386L9 from chromosome 12, complete sequence
          Length = 213561

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 109   caaacagctacaaattcca 127
             |||||||||||||||||||
Sbjct: 61752 caaacagctacaaattcca 61734


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,628,513
Number of Sequences: 3902068
Number of extensions: 1628513
Number of successful extensions: 129783
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 129597
Number of HSP's gapped (non-prelim): 263
length of query: 155
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 133
effective length of database: 17,147,199,772
effective search space: 2280577569676
effective search space used: 2280577569676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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