Clone Name | rbart30a07 |
---|---|
Clone Library Name | barley_pub |
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 84.0 bits (206), Expect = 2e-16 Identities = 44/79 (55%), Positives = 51/79 (64%) Frame = -2 Query: 519 KEGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDL 340 +EG KLL+YVYWSNGRETE+PSV NKQCPGKN LRYDTFTA+ Sbjct: 402 EEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFTAEA---- 457 Query: 339 LGTKVEFTGVTKATSGVAD 283 G KV TGVTKA++ + Sbjct: 458 -GKKVVITGVTKASTSAVN 475
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 68.9 bits (167), Expect = 8e-12 Identities = 33/74 (44%), Positives = 45/74 (60%) Frame = -2 Query: 519 KEGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDL 340 +EG KLL++V WSNG ETE+P+V NKQC GK+ RYD+F +VG Sbjct: 444 EEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSP 503 Query: 339 LGTKVEFTGVTKAT 298 LG+ V F+ + KA+ Sbjct: 504 LGSSVNFSSLRKAS 517
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 67.8 bits (164), Expect = 2e-11 Identities = 32/73 (43%), Positives = 42/73 (57%) Frame = -2 Query: 516 EGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDLL 337 EG KL++YV WSNG ETE+PSV NKQC GK+ RYD+F +VG L Sbjct: 463 EGVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDSFDIEVGTSSL 522 Query: 336 GTKVEFTGVTKAT 298 G + T + ++T Sbjct: 523 GASITLTSLKRST 535
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 66.6 bits (161), Expect = 4e-11 Identities = 31/74 (41%), Positives = 46/74 (62%) Frame = -2 Query: 519 KEGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDL 340 ++G++LL++V WSNG ET +P++H+KQC GK+ LRYD+F +VG Sbjct: 438 EDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEVGTST 497 Query: 339 LGTKVEFTGVTKAT 298 LG+ V T + KAT Sbjct: 498 LGSSVTVTSLKKAT 511
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 65.1 bits (157), Expect = 1e-10 Identities = 32/73 (43%), Positives = 42/73 (57%) Frame = -2 Query: 516 EGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDLL 337 +G LLKYV+WSNG ETESP+V NKQC GK+ RYD+F ++G L Sbjct: 400 DGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGESPL 459 Query: 336 GTKVEFTGVTKAT 298 G V T + +A+ Sbjct: 460 GAAVTLTFLKRAS 472
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 60.8 bits (146), Expect = 2e-09 Identities = 32/71 (45%), Positives = 40/71 (56%) Frame = -2 Query: 504 LLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDLLGTKV 325 LL++V WSNG ET +PS NKQCPGK+ RYDTF A V + V Sbjct: 430 LLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAADVVEAPVEPVV 489 Query: 324 EFTGVTKATSG 292 FT +T+A+SG Sbjct: 490 TFTSLTRASSG 500
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 58.9 bits (141), Expect = 8e-09 Identities = 32/71 (45%), Positives = 38/71 (53%) Frame = -2 Query: 504 LLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDLLGTKV 325 LL++V WSNG ET +PS NKQCPGK+ RYDTF A V L V Sbjct: 432 LLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAADVEELPLEPVV 491 Query: 324 EFTGVTKATSG 292 FT +T+A G Sbjct: 492 TFTSLTRAADG 502
>YHR1_HCMVA (P09702) Hypothetical protein HHRF1| Length = 156 Score = 31.6 bits (70), Expect = 1.4 Identities = 24/63 (38%), Positives = 29/63 (46%) Frame = -1 Query: 358 QSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR*QRDQRRAATILTPSSRTYVRASL 179 +S RPS G + Q VR R P+ D +R RD R A T P+S R SL Sbjct: 64 RSENRPSVRTG---AQKQPAVRATERFTAPAADSYR--RDVRAAGTSALPASPPRARPSL 118 Query: 178 YLP 170 Y P Sbjct: 119 YSP 121
>BLI4_CAEEL (P51559) Endoprotease bli-4 precursor (EC 3.4.21.-) (Blisterase)| (Blistered cuticle protein 4) Length = 943 Score = 30.8 bits (68), Expect = 2.3 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +3 Query: 45 YYTGQDCQK*TQHTHTYTRAQCCEATEQDACTCMTDSYVHY 167 Y G C+ + H HT T+A+ CE D+ HY Sbjct: 722 YLDGDKCKMCSSHCHTCTKAEVCETCPGSLLLIDVDNMPHY 762
>GP124_HUMAN (Q96PE1) Probable G-protein coupled receptor 124 precursor (Tumor| endothelial marker 5) Length = 1331 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 361 GQSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR 251 G+ P P+ +G + RH NV GRR GHR Sbjct: 1148 GEGEPEPAGTRGNLAHRHPNNVHHGRRAHKSRAKGHR 1184
>BSC1_YEAST (Q12140) Bypass of stop codon protein 1| Length = 328 Score = 29.6 bits (65), Expect = 5.2 Identities = 19/95 (20%), Positives = 26/95 (27%) Frame = -3 Query: 494 TCTGRTGGRPRAPACTTSSAQARTXXXXXXXXXXXXXXXGTTPSRPKSASTFXXXXXXXX 315 TCT + + TTSS + TT S S+ST Sbjct: 156 TCTKASSSSITTSSITTSSTTTSSTTTSSTTTSSSTTSSSTTSSSTTSSSTTSSSTTSSS 215 Query: 314 XXXXXXPVWQTLFKSFTGRPSVTKGSTQGSNDPYT 210 T S T + + +T S T Sbjct: 216 TTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTKTST 250
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 29.6 bits (65), Expect = 5.2 Identities = 19/114 (16%), Positives = 32/114 (28%) Frame = -3 Query: 488 TGRTGGRPRAPACTTSSAQARTXXXXXXXXXXXXXXXGTTPSRPKSASTFXXXXXXXXXX 309 T T P T+S + T P+ ++STF Sbjct: 251 TSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASASSV 310 Query: 308 XXXXPVWQTLFKSFTGRPSVTKGSTQGSNDPYTVITYVRTCLAISTLVVYVRVS 147 T F S T + T + ++ T + + +T Y+ S Sbjct: 311 ISTTATTSTTFASLTTPATSTASTDHTTSSVSTTNAFTTSATTTTTSDTYISSS 364
>CERU_RAT (P13635) Ceruloplasmin precursor (EC 1.16.3.1) (Ferroxidase)| Length = 1059 Score = 29.6 bits (65), Expect = 5.2 Identities = 17/71 (23%), Positives = 31/71 (43%) Frame = +1 Query: 1 TVRQKGESYCRKVRLITLGKIAKSKHNTRTHTRGHNAAKQPNKMHAHA*LTRTYTTKVDI 180 T R++ + + L LG + + + N A +P +HAH T++ T + Sbjct: 785 TFREQVKRRAEEEHLGMLGPLIHADVGAKVKVVFKNMATRPYSIHAHGVKTKSSTVAPTL 844 Query: 181 ARHVRTYVMTV 213 VRTY+ + Sbjct: 845 PGEVRTYIWQI 855
>SWR1_CANGA (Q6FK48) Helicase SWR1 (EC 3.6.1.-)| Length = 1450 Score = 29.3 bits (64), Expect = 6.8 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +1 Query: 253 DGRPVKDLNSVCHTGRCLGDAGELNLGAEKVEADFGREGVVPEEQL 390 DGR + +V G + GEL LG ++ + G++P E+L Sbjct: 1104 DGRTTIEKFAVLTPGAVTSNIGELTLGMDEFVTPNSKSGIIPYEEL 1149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,304,845 Number of Sequences: 219361 Number of extensions: 1377797 Number of successful extensions: 3287 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3284 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)