ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene ... 84 2e-16
2CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor ... 69 8e-12
3CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (... 68 2e-11
4C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor... 67 4e-11
5C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene ... 65 1e-10
6C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene ... 61 2e-09
7C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene ... 59 8e-09
8YHR1_HCMVA (P09702) Hypothetical protein HHRF1 32 1.4
9BLI4_CAEEL (P51559) Endoprotease bli-4 precursor (EC 3.4.21.-) (... 31 2.3
10GP124_HUMAN (Q96PE1) Probable G-protein coupled receptor 124 pre... 31 2.3
11BSC1_YEAST (Q12140) Bypass of stop codon protein 1 30 5.2
12DAN4_YEAST (P47179) Cell wall protein DAN4 precursor 30 5.2
13CERU_RAT (P13635) Ceruloplasmin precursor (EC 1.16.3.1) (Ferroxi... 30 5.2
14SWR1_CANGA (Q6FK48) Helicase SWR1 (EC 3.6.1.-) 29 6.8

>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase|
           2) (Hydroperoxide dehydrase 2)
          Length = 478

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 44/79 (55%), Positives = 51/79 (64%)
 Frame = -2

Query: 519 KEGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDL 340
           +EG KLL+YVYWSNGRETE+PSV NKQCPGKN              LRYDTFTA+     
Sbjct: 402 EEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFTAEA---- 457

Query: 339 LGTKVEFTGVTKATSGVAD 283
            G KV  TGVTKA++   +
Sbjct: 458 -GKKVVITGVTKASTSAVN 475



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>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 518

 Score = 68.9 bits (167), Expect = 8e-12
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = -2

Query: 519 KEGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDL 340
           +EG KLL++V WSNG ETE+P+V NKQC GK+               RYD+F  +VG   
Sbjct: 444 EEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSP 503

Query: 339 LGTKVEFTGVTKAT 298
           LG+ V F+ + KA+
Sbjct: 504 LGSSVNFSSLRKAS 517



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>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 536

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 32/73 (43%), Positives = 42/73 (57%)
 Frame = -2

Query: 516 EGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDLL 337
           EG KL++YV WSNG ETE+PSV NKQC GK+               RYD+F  +VG   L
Sbjct: 463 EGVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDSFDIEVGTSSL 522

Query: 336 GTKVEFTGVTKAT 298
           G  +  T + ++T
Sbjct: 523 GASITLTSLKRST 535



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>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase 1) (Hydroperoxide dehydrase 1)
          Length = 512

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = -2

Query: 519 KEGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDL 340
           ++G++LL++V WSNG ET +P++H+KQC GK+              LRYD+F  +VG   
Sbjct: 438 EDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEVGTST 497

Query: 339 LGTKVEFTGVTKAT 298
           LG+ V  T + KAT
Sbjct: 498 LGSSVTVTSLKKAT 511



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>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)|
           (Rubber particle protein) (RPP)
          Length = 473

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 32/73 (43%), Positives = 42/73 (57%)
 Frame = -2

Query: 516 EGSKLLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDLL 337
           +G  LLKYV+WSNG ETESP+V NKQC GK+               RYD+F  ++G   L
Sbjct: 400 DGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGESPL 459

Query: 336 GTKVEFTGVTKAT 298
           G  V  T + +A+
Sbjct: 460 GAAVTLTFLKRAS 472



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>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase|
           3) (Hydroperoxide dehydrase 3)
          Length = 500

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 32/71 (45%), Positives = 40/71 (56%)
 Frame = -2

Query: 504 LLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDLLGTKV 325
           LL++V WSNG ET +PS  NKQCPGK+               RYDTF A V    +   V
Sbjct: 430 LLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAADVVEAPVEPVV 489

Query: 324 EFTGVTKATSG 292
            FT +T+A+SG
Sbjct: 490 TFTSLTRASSG 500



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>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase|
           4) (Hydroperoxide dehydrase 4)
          Length = 510

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 32/71 (45%), Positives = 38/71 (53%)
 Frame = -2

Query: 504 LLKYVYWSNGRETESPSVHNKQCPGKNXXXXXXXXXXXXXXLRYDTFTAKVGLDLLGTKV 325
           LL++V WSNG ET +PS  NKQCPGK+               RYDTF A V    L   V
Sbjct: 432 LLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAADVEELPLEPVV 491

Query: 324 EFTGVTKATSG 292
            FT +T+A  G
Sbjct: 492 TFTSLTRAADG 502



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>YHR1_HCMVA (P09702) Hypothetical protein HHRF1|
          Length = 156

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 24/63 (38%), Positives = 29/63 (46%)
 Frame = -1

Query: 358 QSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR*QRDQRRAATILTPSSRTYVRASL 179
           +S  RPS   G    + Q  VR   R   P+ D +R  RD R A T   P+S    R SL
Sbjct: 64  RSENRPSVRTG---AQKQPAVRATERFTAPAADSYR--RDVRAAGTSALPASPPRARPSL 118

Query: 178 YLP 170
           Y P
Sbjct: 119 YSP 121



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>BLI4_CAEEL (P51559) Endoprotease bli-4 precursor (EC 3.4.21.-) (Blisterase)|
           (Blistered cuticle protein 4)
          Length = 943

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 45  YYTGQDCQK*TQHTHTYTRAQCCEATEQDACTCMTDSYVHY 167
           Y  G  C+  + H HT T+A+ CE           D+  HY
Sbjct: 722 YLDGDKCKMCSSHCHTCTKAEVCETCPGSLLLIDVDNMPHY 762



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>GP124_HUMAN (Q96PE1) Probable G-protein coupled receptor 124 precursor (Tumor|
            endothelial marker 5)
          Length = 1331

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 361  GQSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR 251
            G+  P P+  +G +  RH  NV  GRR       GHR
Sbjct: 1148 GEGEPEPAGTRGNLAHRHPNNVHHGRRAHKSRAKGHR 1184



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>BSC1_YEAST (Q12140) Bypass of stop codon protein 1|
          Length = 328

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 19/95 (20%), Positives = 26/95 (27%)
 Frame = -3

Query: 494 TCTGRTGGRPRAPACTTSSAQARTXXXXXXXXXXXXXXXGTTPSRPKSASTFXXXXXXXX 315
           TCT  +       + TTSS    +                TT S   S+ST         
Sbjct: 156 TCTKASSSSITTSSITTSSTTTSSTTTSSTTTSSSTTSSSTTSSSTTSSSTTSSSTTSSS 215

Query: 314 XXXXXXPVWQTLFKSFTGRPSVTKGSTQGSNDPYT 210
                     T   S T   + +  +T  S    T
Sbjct: 216 TTSSSTTSSSTTSSSTTSSSTTSSSTTSSSTKTST 250



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>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 19/114 (16%), Positives = 32/114 (28%)
 Frame = -3

Query: 488 TGRTGGRPRAPACTTSSAQARTXXXXXXXXXXXXXXXGTTPSRPKSASTFXXXXXXXXXX 309
           T  T   P      T+S  +                  T P+   ++STF          
Sbjct: 251 TSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASASSV 310

Query: 308 XXXXPVWQTLFKSFTGRPSVTKGSTQGSNDPYTVITYVRTCLAISTLVVYVRVS 147
                   T F S T   + T  +   ++   T   +  +    +T   Y+  S
Sbjct: 311 ISTTATTSTTFASLTTPATSTASTDHTTSSVSTTNAFTTSATTTTTSDTYISSS 364



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>CERU_RAT (P13635) Ceruloplasmin precursor (EC 1.16.3.1) (Ferroxidase)|
          Length = 1059

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 17/71 (23%), Positives = 31/71 (43%)
 Frame = +1

Query: 1   TVRQKGESYCRKVRLITLGKIAKSKHNTRTHTRGHNAAKQPNKMHAHA*LTRTYTTKVDI 180
           T R++ +    +  L  LG +  +    +      N A +P  +HAH   T++ T    +
Sbjct: 785 TFREQVKRRAEEEHLGMLGPLIHADVGAKVKVVFKNMATRPYSIHAHGVKTKSSTVAPTL 844

Query: 181 ARHVRTYVMTV 213
              VRTY+  +
Sbjct: 845 PGEVRTYIWQI 855



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>SWR1_CANGA (Q6FK48) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1450

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 253  DGRPVKDLNSVCHTGRCLGDAGELNLGAEKVEADFGREGVVPEEQL 390
            DGR   +  +V   G    + GEL LG ++      + G++P E+L
Sbjct: 1104 DGRTTIEKFAVLTPGAVTSNIGELTLGMDEFVTPNSKSGIIPYEEL 1149


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,304,845
Number of Sequences: 219361
Number of extensions: 1377797
Number of successful extensions: 3287
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3284
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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