ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart30a07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ250864.1|HVU250864 Hordeum vulgare mRNA for allene oxide synthase (aos gene) Length = 1819 Score = 1015 bits (512), Expect = 0.0 Identities = 519/520 (99%), Gaps = 1/520 (0%) Strand = Plus / Minus Query: 1 accgtacgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1819 accgtacgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaag 1760 Query: 61 attgccaaaagtaaacacaacacacgcacacatacacgagggcacaatgctgcgaagcaa 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1759 attgccaaaagtaaacacaacacacgcacacatacacgagggcacaatgctgcgaag-aa 1701 Query: 121 ccgaacaagatgcatgcacatgcatgactgactcgtacgtacactactaaggtagatata 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1700 ccgaacaagatgcatgcacatgcatgactgactcgtacgtacactactaaggtagatata 1641 Query: 181 gcgaggcacgtacgtacgtacgtgatgacggtgtaaggatcgttgctgccctgcgttgat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640 gcgaggcacgtacgtacgtacgtgatgacggtgtaaggatcgttgctgccctgcgttgat 1581 Query: 241 ccctttgtcaccgatggccgtccggtgaaggatttaaacagcgtctgccacaccggacgt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1580 ccctttgtcaccgatggccgtccggtgaaggatttaaacagcgtctgccacaccggacgt 1521 Query: 301 tgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggccgactttggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1520 tgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggccgactttggc 1461 Query: 361 cgtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1460 cgtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgac 1401 Query: 421 caggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgtt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1400 caggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgtt 1341 Query: 481 cgaccagtacacgtacttcagcagcttgctcccctccttc 520 |||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 cgaccagtacacgtacttcagcagcttgctcccctccttc 1301
>gb|BT009396.1| Triticum aestivum clone wlm96.pk039.g16:fis, full insert mRNA sequence Length = 1870 Score = 339 bits (171), Expect = 5e-90 Identities = 213/227 (93%) Strand = Plus / Minus Query: 292 accggacgttgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggcc 351 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1540 accggacgtggccttggtgacgccggtgaactcaaccttggtgccgagcaggtcgacccc 1481 Query: 352 gactttggccgtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgac 411 ||| | ||| ||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 1480 gacgtcggcggtgaaggtgtcgtaccggaggaacagctccaccaccaggagcctgcccac 1421 Query: 412 gagcacgaccaggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctc 471 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1420 gagcacgaccaggttcttgcctgggcactgcttgttgtccacgctggggctctcggtctc 1361 Query: 472 ccgcccgttcgaccagtacacgtacttcagcagcttgctcccctcct 518 ||||||||| |||||||||||||||| ||||||||| || ||||||| Sbjct: 1360 ccgcccgttggaccagtacacgtactgcagcagcttccttccctcct 1314 Score = 93.7 bits (47), Expect = 5e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 1 accgtacgccaaaagggggaatcttattgtagaaaagtccggcttattacactgggcaag 60 |||||||||||| || | |||||||||| || ||||||||||||||||||||||||||| Sbjct: 1829 accgtacgccaagagtgagaatcttattacaggaaagtccggcttattacactgggcaag 1770 Query: 61 attgccaaaagtaaa 75 ||||| ||||||||| Sbjct: 1769 attgcgaaaagtaaa 1755 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 107 atgctgcgaagcaaccgaacaagatgcatgca 138 |||| ||||||||||||||||||||||||||| Sbjct: 1718 atgcagcgaagcaaccgaacaagatgcatgca 1687 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 176 atatagcgaggcacgtacgtacgt 199 |||||||||||||||||||||||| Sbjct: 1665 atatagcgaggcacgtacgtacgt 1642
>gb|AY196004.1| Triticum aestivum allene oxide synthase (TaAOS) mRNA, complete cds Length = 1779 Score = 293 bits (148), Expect = 3e-76 Identities = 203/220 (92%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 292 accggacgttgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggcc 351 ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct: 1472 accggacgtggccttggtgacgccggtgaactcaaccttggtgcccagcaggtcgacccc 1413 Query: 352 gactttggccgtgaaggtgtcgtaccgg-aggaacagctccaccaccaggagccggccga 410 ||| | ||| |||||||||||||||||| ||||||||||||||||||||||||| ||| | Sbjct: 1412 gacgtcggcggtgaaggtgtcgtaccgggaggaacagctccaccaccaggagcctgccca 1353 Query: 411 cgagcacgaccaggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtct 470 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 1352 cgagcacgaccaggttcttgcctgggcactgcttgttgtccacgctggggctctcggttt 1293 Query: 471 cccgcccgttcgaccagtacacgtacttcagcagcttgct 510 ||| |||||| ||||||||| |||||| |||||||||||| Sbjct: 1292 ccctcccgttggaccagtacgcgtactgcagcagcttgct 1253 Score = 109 bits (55), Expect = 9e-21 Identities = 104/120 (86%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 19 gaatcttattgtagaaaagtccggcttattacactgggcaagattgccaaaagtaaacac 78 |||||||||| || ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1746 gaatcttattacaggaaagtacggcttattacactgggcaagattgcgaaaagtaa---- 1691 Query: 79 aacacacgcacacatacacgagggcacaatgctgcgaagcaaccgaacaagatgcatgca 138 ||||| | ||||||||||| ||||||| |||| |||||||||||| ||||| |||||||| Sbjct: 1690 aacacgcacacacatacacaagggcaccatgcagcgaagcaaccggacaaggtgcatgca 1631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 176 atatagcgaggcacgtacgtacgtacgtgatgacgg 211 |||||||||||||||||||||||| |||| |||||| Sbjct: 1606 atatagcgaggcacgtacgtacgtgcgtgctgacgg 1571
>emb|AJ251304.1|HVU251304 Hordeum vulgare mRNA for allene oxide synthase (aos2 gene) Length = 1722 Score = 258 bits (130), Expect = 2e-65 Identities = 202/226 (89%) Strand = Plus / Minus Query: 292 accggacgttgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggcc 351 |||||| || ||||||||||| |||||||| |||||||||| |||||| ||||||| ||| Sbjct: 1467 accggatgtggccttggtgacaccggtgaattcaaccttggggccgagcaggtcgacgcc 1408 Query: 352 gactttggccgtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgac 411 ||| | ||| || |||||||||||||||||||||| || || |||||||||| |||||| Sbjct: 1407 gacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgac 1348 Query: 412 gagcacgaccaggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctc 471 |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 1347 gagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctcggtctc 1288 Query: 472 ccgcccgttcgaccagtacacgtacttcagcagcttgctcccctcc 517 || ||| || |||||||||||||||| |||||||||||| |||||| Sbjct: 1287 cctcccattggaccagtacacgtactgcagcagcttgcttccctcc 1242
>ref|NM_187610.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 1361 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 1302 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 1301 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 1242 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 1241 gaccagtacacgtattgcagcagcttcctcccctcct 1205
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 6578480 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 6578421 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 6578420 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 6578361 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 6578360 gaccagtacacgtattgcagcagcttcctcccctcct 6578324 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 364 gaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccag 423 ||||| |||||| |||||||| ||||| || | ||||| || ||||||||||||| | Sbjct: 31461381 gaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaa 31461440 Query: 424 gttcttgcctgggcactgcttgttgtgca 452 || |||||| | ||||||||||| ||||| Sbjct: 31461441 gtccttgccggcgcactgcttgtcgtgca 31461469
>gb|AY062258.1| Oryza sativa (japonica cultivar-group) dev-stage seedling allene oxide synthase (AOS) gene, complete cds Length = 2465 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 1756 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 1697 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 1696 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 1637 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 1636 gaccagtacacgtattgcagcagcttcctcccctcct 1600
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 121242 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 121183 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 121182 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 121123 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 121122 gaccagtacacgtattgcagcagcttcctcccctcct 121086
>gb|AY310358.1| Oryza sativa (japonica cultivar-group) allene oxide synthase mRNA, complete cds Length = 1775 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 1478 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 1419 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 1418 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 1359 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 1358 gaccagtacacgtattgcagcagcttcctcccctcct 1322
>gb|DQ428532.1| Sorghum propinquum locus PRC1203 genomic sequence Length = 518 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||||| |||||||||||| ||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgctgccctcct 168
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 6577693 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 6577634 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 6577633 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 6577574 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 6577573 gaccagtacacgtattgcagcagcttcctcccctcct 6577537 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 364 gaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccag 423 ||||| |||||| |||||||| ||||| || | ||||| || ||||||||||||| | Sbjct: 31551897 gaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaa 31551956 Query: 424 gttcttgcctgggcactgcttgttgtgca 452 || |||||| | ||||||||||| ||||| Sbjct: 31551957 gtccttgccggcgcactgcttgtcgtgca 31551985
>gb|AY055775.1| Oryza sativa allene oxide synthase (AOS) mRNA, complete cds Length = 1809 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 1487 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 1428 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 1427 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 1368 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 1367 gaccagtacacgtattgcagcagcttcctcccctcct 1331
>dbj|AK066138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K11, full insert sequence Length = 1974 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 1624 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 1565 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 1564 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 1505 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 1504 gaccagtacacgtattgcagcagcttcctcccctcct 1468
>dbj|AK061758.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A10, full insert sequence Length = 1843 Score = 153 bits (77), Expect = 7e-34 Identities = 137/157 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 ||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||| Sbjct: 1501 gtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagcaccacc 1442 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 ||||||||||| |||||||||||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct: 1441 aggttcttgccggggcactgcttgttgtcaacgctagggttctccgtctctcgcccattc 1382 Query: 482 gaccagtacacgtacttcagcagcttgctcccctcct 518 |||||||||||||| | ||||||||| |||||||||| Sbjct: 1381 gaccagtacacgtattgcagcagcttcctcccctcct 1345
>gb|DQ428531.1| Sorghum bicolor voucher PI585454 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428530.1| Sorghum bicolor voucher PI267539 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428529.1| Sorghum bicolor voucher PI267408 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428528.1| Sorghum bicolor voucher PI221607 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428527.1| Sorghum bicolor voucher PI152702 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428525.1| Sorghum bicolor voucher NSL87902 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428524.1| Sorghum bicolor voucher NSL87666 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428523.1| Sorghum bicolor voucher NSL77217 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428522.1| Sorghum bicolor voucher NSL77034 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428519.1| Sorghum bicolor voucher NSL55243 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428518.1| Sorghum bicolor voucher NSL51365 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428516.1| Sorghum bicolor voucher NSL51030a locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428515.1| Sorghum bicolor voucher NSL50875 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428514.1| Sorghum bicolor voucher BTx623 locus PRC1203 genomic sequence Length = 518 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||||||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|AY488135.1| Zea mays allene oxide synthase (aos) mRNA, complete cds Length = 1768 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Minus Query: 349 gccgactttggccgtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggcc 408 |||||| | ||| ||||| |||||||| |||||||| ||||| || | ||||||| ||| Sbjct: 1488 gccgacctcggcggtgaatgtgtcgtagcggaggaagagctcgacgaggaggagcctgcc 1429 Query: 409 gacgagcacgaccaggttcttgcctgggcactgcttgttgtgcacgctggggctctcggt 468 ||| ||||| || | |||||| || |||||||||||||||| ||||||||| ||||||| Sbjct: 1428 gaccagcaccacgaagttcttcccggggcactgcttgttgtcgacgctggggttctcggt 1369 Query: 469 ctcccgcccgttcgaccagtacacgtacttcagcagcttgctcccctcct 518 ||| || ||||| |||||||||||||||| |||||||||||| ||||||| Sbjct: 1368 ctcacggccgttggaccagtacacgtactgcagcagcttgctgccctcct 1319
>gb|AY104188.1| Zea mays PCO060855 mRNA sequence Length = 1768 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Minus Query: 349 gccgactttggccgtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggcc 408 |||||| | ||| ||||| |||||||| |||||||| ||||| || | ||||||| ||| Sbjct: 1488 gccgacctcggcggtgaatgtgtcgtagcggaggaagagctcgacgaggaggagcctgcc 1429 Query: 409 gacgagcacgaccaggttcttgcctgggcactgcttgttgtgcacgctggggctctcggt 468 ||| ||||| || | |||||| || |||||||||||||||| ||||||||| ||||||| Sbjct: 1428 gaccagcaccacgaagttcttcccggggcactgcttgttgtcgacgctggggttctcggt 1369 Query: 469 ctcccgcccgttcgaccagtacacgtacttcagcagcttgctcccctcct 518 ||| || ||||| |||||||||||||||| |||||||||||| ||||||| Sbjct: 1368 ctcacggccgttggaccagtacacgtactgcagcagcttgctgccctcct 1319
>gb|DQ428526.1| Sorghum bicolor voucher NSL92371 locus PRC1203 genomic sequence Length = 518 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||| ||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggacgaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428521.1| Sorghum bicolor voucher NSL56174 locus PRC1203 genomic sequence Length = 518 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||| ||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggacgaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428520.1| Sorghum bicolor voucher NSL56003 locus PRC1203 genomic sequence Length = 518 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||| ||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggacgaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>gb|DQ428517.1| Sorghum bicolor voucher NSL51030b locus PRC1203 genomic sequence Length = 518 Score = 137 bits (69), Expect = 4e-29 Identities = 129/149 (86%) Strand = Plus / Minus Query: 362 gtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgacc 421 |||||||||||||| |||| ||| ||||| || | | ||||| |||||||||||| || Sbjct: 324 gtgaaggtgtcgtaacggacgaagagctcgacgaggaagagcctgccgacgagcaccaca 265 Query: 422 aggttcttgcctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttc 481 | ||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||| Sbjct: 264 aagttcttgccggggcactgcttgttgtcgacgctggggttctcggtctcgcgtccgttg 205 Query: 482 gaccagtacacgtacttcagcagcttgct 510 |||||||||||||||| |||||||||||| Sbjct: 204 gaccagtacacgtactgcagcagcttgct 176
>ref|XM_463821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1742 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 465 cggtctcccgcccgttcgaccagtacacgtacttcagcagc 505 |||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 1362 cggtctccggcccgttggaccagtacacgtactgcagcagc 1322
>gb|AY340220.1| Oryza sativa (japonica cultivar-group) hydroperoxide lyase (HPL1) gene, complete cds Length = 1731 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 465 cggtctcccgcccgttcgaccagtacacgtacttcagcagc 505 |||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 1375 cggtctccggcccgttggaccagtacacgtactgcagcagc 1335
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 465 cggtctcccgcccgttcgaccagtacacgtacttcagcagc 505 |||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 555940 cggtctccggcccgttggaccagtacacgtactgcagcagc 555900 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 379 gaggaacagctccaccaccaggagccgg 406 ||||| ||||||||||||||| |||||| Sbjct: 19475227 gaggagcagctccaccaccagcagccgg 19475254 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 368 gtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccaggttc 427 ||||||||||| ||||||||||| |||||| ||||| || || ||| |||| || | Sbjct: 6628978 gtgtcgtaccgccggaacagctccgccaccatcagccgccccaccgccaccaccatgtcc 6628919 Query: 428 ttgcctgggcactgcttgtt 447 || || |||||||||||||| Sbjct: 6628918 ttcccggggcactgcttgtt 6628899
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 465 cggtctcccgcccgttcgaccagtacacgtacttcagcagc 505 |||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 33993 cggtctccggcccgttggaccagtacacgtactgcagcagc 33953
>dbj|AK105694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C08, full insert sequence Length = 1742 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 465 cggtctcccgcccgttcgaccagtacacgtacttcagcagc 505 |||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 1362 cggtctccggcccgttggaccagtacacgtactgcagcagc 1322
>dbj|AK100012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140G07, full insert sequence Length = 1646 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 465 cggtctcccgcccgttcgaccagtacacgtacttcagcagc 505 |||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 1305 cggtctccggcccgttggaccagtacacgtactgcagcagc 1265
>ref|XM_469909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1682 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 364 gaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccag 423 ||||| |||||| |||||||| ||||| || | ||||| || ||||||||||||| | Sbjct: 1467 gaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaa 1408 Query: 424 gttcttgcctgggcactgcttgttgtgca 452 || |||||| | ||||||||||| ||||| Sbjct: 1407 gtccttgccggcgcactgcttgtcgtgca 1379
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 364 gaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccag 423 ||||| |||||| |||||||| ||||| || | ||||| || ||||||||||||| | Sbjct: 131215 gaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaa 131156 Query: 424 gttcttgcctgggcactgcttgttgtgca 452 || |||||| | ||||||||||| ||||| Sbjct: 131155 gtccttgccggcgcactgcttgtcgtgca 131127
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 364 gaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccag 423 ||||| |||||| |||||||| ||||| || | ||||| || ||||||||||||| | Sbjct: 34419 gaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaa 34360 Query: 424 gttcttgcctgggcactgcttgttgtgca 452 || |||||| | ||||||||||| ||||| Sbjct: 34359 gtccttgccggcgcactgcttgtcgtgca 34331
>dbj|AB116527.1| Oryza sativa (japonica cultivar-group) aos mRNA for allene oxide synthase, complete cds Length = 1918 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 364 gaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccag 423 ||||| |||||| |||||||| ||||| || | ||||| || ||||||||||||| | Sbjct: 1590 gaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaa 1531 Query: 424 gttcttgcctgggcactgcttgttgtgca 452 || |||||| | ||||||||||| ||||| Sbjct: 1530 gtccttgccggcgcactgcttgtcgtgca 1502
>emb|AJ318870.1|HVU318870 Hordeum vulgare mRNA for fatty acid hydroperoxide lyase (13-hpl gene) Length = 1673 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 465 cggtctcccgcccgttcgaccagtacacgtacttcagcagc 505 |||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 1339 cggtctccggcccgttggaccagtacacgtaccgcagcagc 1299
>dbj|AK068620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K19, full insert sequence Length = 1997 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 364 gaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccag 423 ||||| |||||| |||||||| ||||| || | ||||| || ||||||||||||| | Sbjct: 1684 gaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaa 1625 Query: 424 gttcttgcctgggcactgcttgttgtgca 452 || |||||| | ||||||||||| ||||| Sbjct: 1624 gtccttgccggcgcactgcttgtcgtgca 1596
>dbj|AK066137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054B10, full insert sequence Length = 3951 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 364 gaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccag 423 ||||| |||||| |||||||| ||||| || | ||||| || ||||||||||||| | Sbjct: 1788 gaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaa 1847 Query: 424 gttcttgcctgggcactgcttgttgtgca 452 || |||||| | ||||||||||| ||||| Sbjct: 1848 gtccttgccggcgcactgcttgtcgtgca 1876
>gb|AC022346.4| Drosophila melanogaster clone BACR22I24, complete sequence Length = 181052 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 75 acacaacacacgcacacatacac 97 ||||||||||||||||||||||| Sbjct: 104684 acacaacacacgcacacatacac 104662
>gb|AC104148.5| Drosophila melanogaster X BAC RP98-34O3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181395 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 80 acacacgcacacatacacgaggg 102 ||||||||||||||||||||||| Sbjct: 68544 acacacgcacacatacacgaggg 68522
>gb|AC022343.2|AC022343 Drosophila melanogaster, chromosome X, region 12E-12F, BAC clone BACR33F13, complete sequence Length = 164853 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 acacaacacacgcacacatacac 97 ||||||||||||||||||||||| Sbjct: 161072 acacaacacacgcacacatacac 161094
>gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 of 74 of the complete sequence Length = 299868 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 acacaacacacgcacacatacac 97 ||||||||||||||||||||||| Sbjct: 103225 acacaacacacgcacacatacac 103247
>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete sequence Length = 309053 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 80 acacacgcacacatacacgaggg 102 ||||||||||||||||||||||| Sbjct: 221237 acacacgcacacatacacgaggg 221215
>emb|AL138971.1|DMBR43E12 Drosophila melanogaster BAC clone BACR43E12 Length = 102621 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 80 acacacgcacacatacacgaggg 102 ||||||||||||||||||||||| Sbjct: 51435 acacacgcacacatacacgaggg 51413
>gb|DQ177691.1| Uncultured bacterium clone 3223 putative membrane-bound nitrate reductase (narG) gene, partial cds Length = 641 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 ggccgtgaaggtgtcgtaccgg 379 |||||||||||||||||||||| Sbjct: 147 ggccgtgaaggtgtcgtaccgg 126
>emb|BX957359.10| Zebrafish DNA sequence from clone DKEY-234E8 in linkage group 7, complete sequence Length = 180396 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 72 taaacacaacacacgcacacatacac 97 |||||||||||||| ||||||||||| Sbjct: 99571 taaacacaacacacacacacatacac 99596
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 324 caaccttggtgccgagaaggtcgaggccga 353 |||||||||| ||| ||||||||||||||| Sbjct: 1481400 caaccttggtcccgggaaggtcgaggccga 1481371
>gb|AC120982.2| Homo sapiens chromosome 19 clone LLNLR-289A1, complete sequence Length = 32173 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 75 acacaacacacgcacacataca 96 |||||||||||||||||||||| Sbjct: 21490 acacaacacacgcacacataca 21511
>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence Length = 194261 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 aaacacaacacacgcacacatacac 97 ||||||||||||| ||||||||||| Sbjct: 158060 aaacacaacacacacacacatacac 158036
>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence Length = 208907 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 aaacacaacacacgcacacat 93 ||||||||||||||||||||| Sbjct: 150304 aaacacaacacacgcacacat 150324
>emb|CR974459.7| Mouse DNA sequence from clone RP23-179P23 on chromosome X, complete sequence Length = 226435 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 aaacacaacacacgcacacatacac 97 ||||||||||||| ||||||||||| Sbjct: 13201 aaacacaacacacacacacatacac 13177
>gb|AC127563.4| Mus musculus BAC clone RP24-283E13 from chromosome 10, complete sequence Length = 150502 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 aaacacaacacacgcacacatacac 97 ||||||||||||| ||||||||||| Sbjct: 59535 aaacacaacacacacacacatacac 59511
>gb|AC123934.2| Mus musculus BAC clone RP23-354D22 from chromosome 17, complete sequence Length = 207817 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 aaacacaacacacgcacacatacac 97 ||||||||||||| ||||||||||| Sbjct: 162059 aaacacaacacacacacacatacac 162083
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence Length = 193830 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 acacacgcacacatacacgagggca 104 |||||||||||||||||| |||||| Sbjct: 74496 acacacgcacacatacacaagggca 74472
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 aaacacaacacacgcacacatacac 97 ||||||||||||| ||||||||||| Sbjct: 22724 aaacacaacacacacacacatacac 22748
>gb|AF499544.1| Wilsonia pusilla isolate 76 mitochondrial control region, partial sequence Length = 343 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 gaggcacgtacgtacgtacgt 203 ||||||||||||||||||||| Sbjct: 57 gaggcacgtacgtacgtacgt 77
>gb|AF499538.1| Wilsonia pusilla isolate 70 mitochondrial control region, partial sequence Length = 343 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 gaggcacgtacgtacgtacgt 203 ||||||||||||||||||||| Sbjct: 57 gaggcacgtacgtacgtacgt 77
>emb|BX842636.1| Neurospora crassa DNA linkage group I cosmid contig 7C14 Length = 68050 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 cgtacactactaaggtagata 178 ||||||||||||||||||||| Sbjct: 24283 cgtacactactaaggtagata 24303
>emb|CR628363.12| Mouse DNA sequence from clone RP23-329B21 on chromosome X, complete sequence Length = 196122 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 aaacacaacacacgcacacatacac 97 ||||||||||||| ||||||||||| Sbjct: 18467 aaacacaacacacacacacatacac 18443
>emb|BX005206.15| Mouse DNA sequence from clone RP23-384P3 on chromosome X, complete sequence Length = 202812 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 aaacacaacacacgcacacatacac 97 ||||||||||||| ||||||||||| Sbjct: 63131 aaacacaacacacacacacatacac 63107
>gb|AE005710.1| Caulobacter crescentus CB15 section 36 of 359 of the complete genome Length = 11283 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 gccgagaaggtcgaggccgac 354 ||||||||||||||||||||| Sbjct: 5932 gccgagaaggtcgaggccgac 5912
>dbj|AB035859.1| Coturnix coturnix japonica DNA, microsatellite GUJ0049 sequence Length = 243 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 aaacacaacacacgcacacatacac 97 |||||||||||||||||||| |||| Sbjct: 130 aaacacaacacacgcacacacacac 154
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence Length = 198695 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 acacacgcacacatacacgagggca 104 |||||||||||||||||| |||||| Sbjct: 120282 acacacgcacacatacacaagggca 120306
>dbj|AK159060.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530047H15 product:hypothetical protein, full insert sequence Length = 4837 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 acacacgcacacatacacgagggca 104 |||||||||||||||||| |||||| Sbjct: 496 acacacgcacacatacacaagggca 472
>gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, complete sequence Length = 208509 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 acacacgcacacatacacgagggca 104 |||||| |||||||||||||||||| Sbjct: 175831 acacacacacacatacacgagggca 175807
>gb|AC097004.3| Papio anubis clone RP41-290N16, complete sequence Length = 166987 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 aacacaacacacgcacacatacacg 98 |||||||||| |||||||||||||| Sbjct: 148735 aacacaacacgcgcacacatacacg 148759
>gb|AF172724.1|AF172724 Caulobacter crescentus structural maintenance of chromosomes protein homolog Smc (smc) gene, complete cds Length = 3701 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 gccgagaaggtcgaggccgac 354 ||||||||||||||||||||| Sbjct: 2245 gccgagaaggtcgaggccgac 2265
>emb|BX572080.18| Zebrafish DNA sequence from clone DKEY-22N17 in linkage group 13, complete sequence Length = 224120 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 acacacgcacacatacacgag 100 ||||||||||||||||||||| Sbjct: 206971 acacacgcacacatacacgag 206951
>gb|AC102262.9| Mus musculus chromosome 15, clone RP24-216B4, complete sequence Length = 191626 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 acacacgcacacatacacgagggca 104 |||||| |||||||||||||||||| Sbjct: 140059 acacacacacacatacacgagggca 140083
>emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, complete sequence Length = 171830 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 acacacgcacacatacacgag 100 ||||||||||||||||||||| Sbjct: 140933 acacacgcacacatacacgag 140953
>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence Length = 191241 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 aaacacaacacacgcacacatacac 97 ||||||||||||| ||||||||||| Sbjct: 62147 aaacacaacacacacacacatacac 62171
>gb|U00428.1|U00428 Linum usitatissimum allene oxide synthase mRNA complete cds Length = 2038 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Minus Query: 431 cctgggcactgcttgttgtgcacgctggggctctcggtctcccgcccgttcgaccagtac 490 |||| |||||||||||| |||||| || |||| |||||| ||||||||||||| | Sbjct: 1720 cctgcgcactgcttgttcgccacgctcggcgtctccgtctccggcccgttcgaccacatc 1661 Query: 491 acgtacttcagcagctt 507 ||||||| || |||||| Sbjct: 1660 acgtactccatcagctt 1644
>gb|AY780525.1| Bacillus sp. MB24 transposon TnARS1, complete sequence Length = 13790 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aagcaaccgaacaagatgca 134 |||||||||||||||||||| Sbjct: 4548 aagcaaccgaacaagatgca 4567
>ref|XM_466076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 673 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gaggaacagctccaccaccaggagccgg 406 ||||| ||||||||||||||| |||||| Sbjct: 372 gaggagcagctccaccaccagcagccgg 345
>ref|XM_464670.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1721 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 368 gtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccaggttc 427 ||||||||||| ||||||||||| |||||| ||||| || || ||| |||| || | Sbjct: 1496 gtgtcgtaccgccggaacagctccgccaccatcagccgccccaccgccaccaccatgtcc 1437 Query: 428 ttgcctgggcactgcttgtt 447 || || |||||||||||||| Sbjct: 1436 ttcccggggcactgcttgtt 1417
>gb|AY022493.1| Oryza sativa microsatellite MRG4818 containing (AGT)X12, genomic sequence Length = 236 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gcacgtacgtacgtacgtga 205 |||||||||||||||||||| Sbjct: 213 gcacgtacgtacgtacgtga 194
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gcacgtacgtacgtacgtga 205 |||||||||||||||||||| Sbjct: 13654 gcacgtacgtacgtacgtga 13673
>ref|XM_429617.1| PREDICTED: Gallus gallus LOC419005 (LOC419005), mRNA Length = 1983 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 cgctggggctctcggtctcccgcc 476 |||||||||||||||| ||||||| Sbjct: 238 cgctggggctctcggtttcccgcc 215
>gb|AC122060.3| Mus musculus BAC clone RP24-468P4 from chromosome 12, complete sequence Length = 170916 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 caacacacgcacacatacac 97 |||||||||||||||||||| Sbjct: 117 caacacacgcacacatacac 98
>gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, complete sequence Length = 159753 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 |||||||||||| ||||||||||| Sbjct: 7081 aacacaacacacacacacatacac 7058
>gb|AC118645.13| Mus musculus chromosome 15, clone RP24-114E9, complete sequence Length = 172076 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 83908 aacacaacacacgcacacacacac 83931
>gb|AC113244.19| Mus musculus chromosome 19, clone RP23-172E2, complete sequence Length = 224351 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 aacacaacacacgcacacatacac 97 |||||||||||| ||||||||||| Sbjct: 26137 aacacaacacacacacacatacac 26160
>emb|AJ427928.1|ABI427928 Adalia bipunctata microsatellite DNA, clone Ab5 Length = 126 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 83 aacacaacacacgcacacacacac 60
>gb|AC133091.3| Mus musculus BAC clone RP23-394D15 from chromosome 8, complete sequence Length = 221035 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ttgccaaaagtaaacacaac 81 |||||||||||||||||||| Sbjct: 147001 ttgccaaaagtaaacacaac 146982
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence Length = 188243 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 caacacacgcacacatacac 97 |||||||||||||||||||| Sbjct: 5678 caacacacgcacacatacac 5697
>gb|AC124176.3| Mus musculus BAC clone RP23-184D18 from 7, complete sequence Length = 180922 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 63 tgccaaaagtaaacaca-acacacgcacacatacac 97 ||||||||||||||||| |||||| |||||| |||| Sbjct: 12154 tgccaaaagtaaacacacacacacacacacacacac 12189
>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence Length = 183991 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 2289 aacacaacacacgcacacacacac 2266
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence Length = 119355 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 32998 aacacaacacacgcacacacacac 33021
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence Length = 128352 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 120658 aacacaacacacgcacacacacac 120635
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence Length = 145905 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 12879 aacacaacacacgcacacacacac 12902
>gb|AC135161.11| Medicago truncatula clone mth2-30k24, complete sequence Length = 88701 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 6406 aacacaacacacgcacacacacac 6383
>emb|Z94056.1|HS436M11 Human DNA sequence from clone RP3-436M11 on chromosome Xp22.11-22.2, complete sequence Length = 134403 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 66 caaaagtaaacacaacacacgcacacatacac 97 |||||| | |||| |||||||||||||||||| Sbjct: 87453 caaaagaatacaccacacacgcacacatacac 87422
>emb|AL513349.11| Human DNA sequence from clone RP11-566G9 on chromosome 1 Contains part of the NEGR1 gene for neuronal growth regulator 1, complete sequence Length = 149587 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ttgccaaaagtaaacacaac 81 |||||||||||||||||||| Sbjct: 115371 ttgccaaaagtaaacacaac 115352
>emb|AL445685.18| Human DNA sequence from clone RP11-91A18 on chromosome 1 Contains the 5' end of the RAB3B gene for RAB3B member RAS oncogene family, a 40s ribosomal protein S26 (RPS26) pseudogene, the gene for endoplasmic reticulum thioredoxin superfamily member 18 kDa (TLP19), three novel genes, the 5' end of the gene for a novel protein similar to RNA polymerase B transcription factor 3 (MGC23908) and a CpG island, complete sequence Length = 142790 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 |||||||||||| ||||||||||| Sbjct: 80627 aacacaacacacacacacatacac 80604
>gb|AC084243.7| Homo sapiens chromosome 11, clone CTD-3224I3, complete sequence Length = 154201 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 aagatgcatgcacatgcatg 146 |||||||||||||||||||| Sbjct: 2136 aagatgcatgcacatgcatg 2117
>gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cancer institute Human BAC Library) complete sequence Length = 146175 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 |||||||||||| ||||||||||| Sbjct: 128194 aacacaacacacacacacatacac 128171
>gb|AC154620.2| Mus musculus BAC clone RP23-323M20 from chromosome 13, complete sequence Length = 193801 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cacacatacacgagggcacaatgc 110 |||||||||| ||||||||||||| Sbjct: 155246 cacacatacaggagggcacaatgc 155269
>gb|AC162467.6| Mus musculus 10 BAC RP24-528H20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172752 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 |||||||||||| ||||||||||| Sbjct: 38593 aacacaacacacacacacatacac 38570
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15, complete sequence Length = 130618 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 acgtacgtacgtacgtgatg 207 |||||||||||||||||||| Sbjct: 119570 acgtacgtacgtacgtgatg 119589
>emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5, COMPLETE SEQUENCE Length = 199033 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 57867 aacacaacacacgcacacacacac 57890 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 43743 aacacaacacacgcacacacacac 43766
>emb|CR450696.6| Zebrafish DNA sequence from clone CH211-147K9 in linkage group 25, complete sequence Length = 187055 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 taaacacaacacacgcacac 91 |||||||||||||||||||| Sbjct: 60071 taaacacaacacacgcacac 60052
>emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 in linkage group 17, complete sequence Length = 161999 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aacacacgcacacatacacg 98 |||||||||||||||||||| Sbjct: 153412 aacacacgcacacatacacg 153393
>emb|BX294444.7| Zebrafish DNA sequence from clone CH211-281E15 in linkage group 14, complete sequence Length = 169694 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 agtaaacacaacacacgcacacatacac 97 |||||||||||||||| |||||| |||| Sbjct: 155608 agtaaacacaacacacacacacacacac 155581
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gccgagaaggtcgaggccga 353 |||||||||||||||||||| Sbjct: 4240169 gccgagaaggtcgaggccga 4240188
>emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in linkage group 23, complete sequence Length = 74936 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 aaacacaacacacgcacaca 92 |||||||||||||||||||| Sbjct: 39618 aaacacaacacacgcacaca 39599
>gb|AC013549.9| Homo sapiens chromosome 11, clone RP11-47J17, complete sequence Length = 163180 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 aaacacaacacacgcacacataca 96 ||||||||||||| |||||||||| Sbjct: 111135 aaacacaacacacacacacataca 111158
>gb|AC023946.5| Homo sapiens chromosome 11, clone RP11-567I13, complete sequence Length = 187380 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 aagatgcatgcacatgcatg 146 |||||||||||||||||||| Sbjct: 178893 aagatgcatgcacatgcatg 178874
>gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, complete sequence Length = 180650 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 70 agtaaacacaacacacgcacacatacac 97 |||| ||||||||||| ||||||||||| Sbjct: 72971 agtacacacaacacacacacacatacac 72998
>gb|AC100843.2| Homo sapiens chromosome 18, clone RP11-640A1, complete sequence Length = 180160 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 acaacacacgcacacatacacgag 100 |||||||||||||||| ||||||| Sbjct: 34958 acaacacacgcacacacacacgag 34935
>gb|DQ020086.1| Heliconius melpomene clone Hm16 microsatellite sequence Length = 269 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 acacaacacacgcacacatacacg 98 ||||||||||| |||||||||||| Sbjct: 119 acacaacacacacacacatacacg 96
>gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's Hospital Oakland Research Institute) complete sequence Length = 215780 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 agtaaacacaacacacgcacacatacac 97 ||||| ||||||||||||||||| |||| Sbjct: 101300 agtaatcacaacacacgcacacaaacac 101273
>emb|BX255941.9| Zebrafish DNA sequence from clone BUSM1-182C22 in linkage group 23, complete sequence Length = 107132 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 aaacacaacacacgcacaca 92 |||||||||||||||||||| Sbjct: 45043 aaacacaacacacgcacaca 45024
>gb|AF298900.1|AF298900 Homo sapiens clone 390j15 chromosome 18 map 18q21, complete sequence Length = 180000 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 acaacacacgcacacatacacgag 100 |||||||||||||||| ||||||| Sbjct: 166575 acaacacacgcacacacacacgag 166598
>gb|AC009061.10|AC009061 Homo sapiens chromosome 16 clone RP11-297D21, complete sequence Length = 200618 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 aacacaacacacgcacacatacac 97 |||||||||||| ||||||||||| Sbjct: 42154 aacacaacacacacacacatacac 42177
>gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190387 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 |||||||||||| ||||||||||| Sbjct: 77774 aacacaacacacacacacatacac 77751
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 acgtacgtacgtacgtgatg 207 |||||||||||||||||||| Sbjct: 3653278 acgtacgtacgtacgtgatg 3653297
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gcacgtacgtacgtacgtga 205 |||||||||||||||||||| Sbjct: 29529152 gcacgtacgtacgtacgtga 29529171
>gb|AC137590.2| Homo sapiens 12 BAC RP13-820C6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128729 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 aacacaacacacgcacacatacac 97 ||||||||||||||||||| |||| Sbjct: 36559 aacacaacacacgcacacacacac 36536
>gb|AC154558.2| Mus musculus BAC clone RP23-240G18 from chromosome 13, complete sequence Length = 186758 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cacacatacacgagggcacaatgc 110 |||||||||| ||||||||||||| Sbjct: 161348 cacacatacaggagggcacaatgc 161325
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 379 gaggaacagctccaccaccaggagccgg 406 ||||| ||||||||||||||| |||||| Sbjct: 92754 gaggagcagctccaccaccagcagccgg 92781
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 368 gtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccaggttc 427 ||||||||||| ||||||||||| |||||| ||||| || || ||| |||| || | Sbjct: 63353 gtgtcgtaccgccggaacagctccgccaccatcagccgccccaccgccaccaccatgtcc 63294 Query: 428 ttgcctgggcactgcttgtt 447 || || |||||||||||||| Sbjct: 63293 ttcccggggcactgcttgtt 63274
>dbj|AK120980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A15, full insert sequence Length = 672 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 gaggaacagctccaccaccaggagccgg 406 ||||| ||||||||||||||| |||||| Sbjct: 371 gaggagcagctccaccaccagcagccgg 344
>dbj|AK107161.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-F02, full insert sequence Length = 1721 Score = 40.1 bits (20), Expect = 7.0 Identities = 65/80 (81%) Strand = Plus / Minus Query: 368 gtgtcgtaccggaggaacagctccaccaccaggagccggccgacgagcacgaccaggttc 427 ||||||||||| ||||||||||| |||||| ||||| || || ||| |||| || | Sbjct: 1496 gtgtcgtaccgccggaacagctccgccaccatcagccgccccaccgccaccaccatgtcc 1437 Query: 428 ttgcctgggcactgcttgtt 447 || || |||||||||||||| Sbjct: 1436 ttcccggggcactgcttgtt 1417
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gccgagaaggtcgaggccga 353 |||||||||||||||||||| Sbjct: 3673435 gccgagaaggtcgaggccga 3673454
>gb|AC151051.2| Mus musculus BAC clone RP24-333M6 from 7, complete sequence Length = 196288 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 63 tgccaaaagtaaacaca-acacacgcacacatacac 97 ||||||||||||||||| |||||| |||||| |||| Sbjct: 167863 tgccaaaagtaaacacacacacacacacacacacac 167898
>gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, complete sequence Length = 219234 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 caacacacgcacacatacac 97 |||||||||||||||||||| Sbjct: 182046 caacacacgcacacatacac 182027
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence Length = 198621 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 acacaacacacgcacacatacacg 98 |||||||||| ||||||||||||| Sbjct: 32968 acacaacacatgcacacatacacg 32945
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete sequence Length = 218753 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 caacacacgcacacatacac 97 |||||||||||||||||||| Sbjct: 217293 caacacacgcacacatacac 217274
>emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 map Xq28, complete sequence Length = 145822 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 66 caaaagtaaacacaacacacgcacacatacac 97 |||||| | |||| |||||||||||||||||| Sbjct: 30697 caaaagaatacactacacacgcacacatacac 30728
>gb|AF398400.1| Beauveria bassiana isolate Bsp 590 small subunit ribosomal RNA gene, partial sequence Length = 462 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ggcacgtacgtacgtacgtg 204 |||||||||||||||||||| Sbjct: 170 ggcacgtacgtacgtacgtg 189
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gcacgtacgtacgtacgtga 205 |||||||||||||||||||| Sbjct: 113422 gcacgtacgtacgtacgtga 113441
>emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on chromosome X, complete sequence Length = 175689 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 acaacacacgcacacataca 96 |||||||||||||||||||| Sbjct: 95655 acaacacacgcacacataca 95636 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,630,917 Number of Sequences: 3902068 Number of extensions: 3630917 Number of successful extensions: 201131 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 200008 Number of HSP's gapped (non-prelim): 1110 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
