ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart30a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 60 3e-09
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 50 2e-06
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 45 7e-05
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 37 0.033
5HAL9_YEAST (Q12180) Halotolerance protein 9 31 1.4
6MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domai... 31 1.8
7MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domai... 31 1.8
8GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX) ... 30 4.0

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
 Frame = -2

Query: 466 YDMVQNPSKYGFNAVFEACCGSGGGKYNYANSARCGMQGAA---------ACASPADHLS 314
           Y +   P K+GF      CCG GG KYN++ +A CG    A         +CA P+  ++
Sbjct: 287 YSLFSEPEKHGFEFPLITCCGYGG-KYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVN 345

Query: 313 WDGIHLTEAAYKHITDGWLNGPYCSPAI 230
           WDG H TEAA ++  D    G +  P +
Sbjct: 346 WDGAHYTEAANEYFFDQISTGAFSDPPV 373



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
 Frame = -2

Query: 466 YDMVQNPSKYGFNAVFEACCGSGGGKYNYANSARCGMQGAAA---------CASPADHLS 314
           +++  +   +GF     +CCG GG KYNY     CGM+             C  P   + 
Sbjct: 285 HELFVHAQGHGFKGSLVSCCGHGG-KYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVV 343

Query: 313 WDGIHLTEAAYKHITD 266
           WDG+H T+AA K I D
Sbjct: 344 WDGVHFTQAANKFIFD 359



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = -2

Query: 460 MVQNPSKYGFNAVFEACCGSGGGKYNYANSARCGMQGAAACASPADHLSWDGIHLTEAAY 281
           M++ P+ YGF    + CC +G      +  A C    +  C + + +L WDG+H T+ AY
Sbjct: 462 MLETPAAYGFEETKKPCCKTG----LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAY 517

Query: 280 KHI 272
           K I
Sbjct: 518 KTI 520



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = -2

Query: 460 MVQNPSKYGFNAVFEACCGSGGGKYNYANSARCGMQGAAACASPADHLSWDGIHLTEAAY 281
           M+++P  YGF  + + CC  G  K        C  +     ++ + +L WDG+H ++ AY
Sbjct: 379 MLESPEDYGFEEIKKPCCKIGLTK----GGVFCKERTLKNMSNASSYLFWDGLHPSQRAY 434

Query: 280 K 278
           +
Sbjct: 435 E 435



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>HAL9_YEAST (Q12180) Halotolerance protein 9|
          Length = 1030

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -2

Query: 133 YLKEKRKFVSVSYIWYGGAEIIIYTLPKKKKPEATLE 23
           Y  + +KF+ +S   +  +EII+Y+LP KK+ +  LE
Sbjct: 333 YATQMKKFMDLSSPAFFSSEIILYSLPPKKQAKRLLE 369



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>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
            domain-containing protein 4) (Multiple EGF-like domain
            protein 4)
          Length = 2386

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 21/64 (32%), Positives = 27/64 (42%)
 Frame = -2

Query: 421  FEACCGSGGGKYNYANSARCGMQGAAACASPADHLSWDGIHLTEAAYKHITDGWLNGPYC 242
            +EA   S  G      SARCG  G  +C  P + +  DG     A       GW  GP+C
Sbjct: 929  WEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVPQDG--AAGAGLCRCPQGWA-GPHC 985

Query: 241  SPAI 230
              A+
Sbjct: 986  RMAL 989



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>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like|
            domain-containing protein 4) (Multiple EGF-like domain
            protein 4)
          Length = 2330

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 21/64 (32%), Positives = 27/64 (42%)
 Frame = -2

Query: 421  FEACCGSGGGKYNYANSARCGMQGAAACASPADHLSWDGIHLTEAAYKHITDGWLNGPYC 242
            +EA   S  G      SARCG  G  +C  P + +  DG     A       GW  GP+C
Sbjct: 929  WEANGSSSWGFNASVGSARCGSGGPGSCPVPQECVPQDG--AAGAGLCRCPQGWA-GPHC 985

Query: 241  SPAI 230
              A+
Sbjct: 986  RMAL 989



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>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)|
           (Endo-1,4-beta-glucanase) (Cellulase) (Fragment)
          Length = 224

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 319 LSWDGIHLTEAAYKHITDGW 260
           +SWDG+HL+E  Y  I + W
Sbjct: 114 ISWDGLHLSEIGYTKIANIW 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,831,097
Number of Sequences: 219361
Number of extensions: 918392
Number of successful extensions: 2414
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2408
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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