ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart29h12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
2dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
3dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
4dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
5gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8... 56 1e-04
6dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
7gb|AY108381.1| Zea mays PCO088244 mRNA sequence 56 1e-04
8gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ... 56 1e-04
9ref|XM_648008.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 46 0.098
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
11dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
12dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
13dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.098
14dbj|AK073836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
15dbj|AK067218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
16gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ... 44 0.39
17ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.5
18ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.5
19gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds 42 1.5
20emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate ... 42 1.5
21gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, com... 42 1.5
22gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28... 42 1.5
23gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete s... 42 1.5
24gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate re... 42 1.5
25dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a prot... 42 1.5
26emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chro... 42 1.5
27gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7... 40 6.0
28gb|AC165353.4| Mus musculus BAC clone RP23-167C2 from chromosome... 40 6.0
29gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 6.0
30ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant... 40 6.0
31gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosom... 40 6.0
32gb|AF098985.2| Caenorhabditis elegans cosmid C08G5, complete seq... 40 6.0
33emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chr... 40 6.0
34emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821 40 6.0
35dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.0
36gb|AE005923.1| Caulobacter crescentus CB15 section 249 of 359 of... 40 6.0
37gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence 40 6.0
38ref|NM_061403.1| Caenorhabditis elegans C08G5.6 (C08G5.6) mRNA, ... 40 6.0
39emb|BX934911.1| Gallus gallus finished cDNA, clone ChEST150h3 40 6.0
40gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana... 40 6.0
41emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on ch... 40 6.0
42gb|AF099188.1|AF099188 Caulobacter crescentus cell division prot... 40 6.0
43gb|AY106967.1| Zea mays PCO088243 mRNA sequence 40 6.0
44gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase ... 40 6.0
45gb|AC161251.3| Mus musculus BAC clone RP24-174C13 from chromosom... 40 6.0
46gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complet... 40 6.0
47emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chro... 40 6.0 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                            
Query: 171      cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 230
                ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 15167404 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 15167463

                                                             
Query: 231      ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 275
                 ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 15167464 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 15167508
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>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                          
Query: 171    cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 230
              ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 139370 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 139429

                                                           
Query: 231    ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 275
               ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 139430 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 139474
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>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0493G01
          Length = 167587

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 171   cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 230
             ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 20777 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 20836

                                                          
Query: 231   ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 275
              ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 20837 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 20881
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>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full
            insert sequence
          Length = 2710

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                        
Query: 171  cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 230
            ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 2453 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 2394

                                                         
Query: 231  ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 275
             ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 2393 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 2349
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>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete cds
          Length = 1529

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 85   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 132
            ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 1269 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 1222
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>dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H07, full
            insert sequence
          Length = 1360

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 85   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 132
            ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 1150 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 1103



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 412 gccatgtggaggccgagcgcgtgcgggtcggagtcg 447
           |||||||||  | ||||||||| |||||||||||||
Sbjct: 802 gccatgtgggcggcgagcgcgtccgggtcggagtcg 767
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>gb|AY108381.1| Zea mays PCO088244 mRNA sequence
          Length = 694

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 85  aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 132
           ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 434 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 387
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>gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0043H01, from
             chromosome 4, complete sequence
          Length = 15426

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 85    aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 132
             ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 12779 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 12826



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 412   gccatgtggaggccgagcgcgtgcgggtcggagtcg 447
             |||||||||  | ||||||||| |||||||||||||
Sbjct: 13127 gccatgtgggcggcgagcgcgtccgggtcggagtcg 13162
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>ref|XM_648008.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (94.t00028)
            partial mRNA
          Length = 1644

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 35   caatatatggatcaatcattatttatg 61
            ||||||||| |||||||||||||||||
Sbjct: 1264 caatatatgaatcaatcattatttatg 1290
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                           
Query: 162     gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 221
               |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 5889728 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 5889787

                                                                  
Query: 222     gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 272
               |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 5889788 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 5889838
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>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 162   gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 221
             |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 11380 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 11439

                                                                
Query: 222   gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 272
             |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 11440 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 11490
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 162   gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 221
             |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 90503 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 90562

                                                                
Query: 222   gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 272
             |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 90563 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 90613
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>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full
            insert sequence
          Length = 1517

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 89/111 (80%)
 Strand = Plus / Minus

                                                                        
Query: 162  gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 221
            |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 1180 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 1121

                                                               
Query: 222  gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 272
            |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 1120 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 1070
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>dbj|AK073836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H04, full
            insert sequence
          Length = 2314

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 171  cctcttcggcaggtcagggtttgccaggaa 200
            |||| ||||||||||||| |||||||||||
Sbjct: 1981 cctcctcggcaggtcaggatttgccaggaa 1952
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>dbj|AK067218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098J23, full
            insert sequence
          Length = 2420

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 171  cctcttcggcaggtcagggtttgccaggaa 200
            |||| ||||||||||||| |||||||||||
Sbjct: 2087 cctcctcggcaggtcaggatttgccaggaa 2058
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>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
            chromosome 4, complete sequence
          Length = 90825

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 171  cctcttcggcaggtcagggtttgccaggaa 200
            |||| ||||||||||||| |||||||||||
Sbjct: 3632 cctcctcggcaggtcaggatttgccaggaa 3661
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>ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.2 mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 88   gggtagtcggtgtaaccgacgacgggatc 116
            ||||| ||||||||||||||||| |||||
Sbjct: 1242 gggtaatcggtgtaaccgacgactggatc 1214
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>ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.1 mRNA, complete cds
          Length = 1451

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 88   gggtagtcggtgtaaccgacgacgggatc 116
            ||||| ||||||||||||||||| |||||
Sbjct: 1233 gggtaatcggtgtaaccgacgactggatc 1205
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>gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 88   gggtagtcggtgtaaccgacgacgggatc 116
            ||||| ||||||||||||||||| |||||
Sbjct: 1097 gggtaatcggtgtaaccgacgactggatc 1069
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>emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate reductase
          Length = 1311

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 88   gggtagtcggtgtaaccgacgacgggatc 116
            ||||| ||||||||||||||||| |||||
Sbjct: 1162 gggtaatcggtgtaaccgacgactggatc 1134
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>gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, complete cds
          Length = 1252

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 88   gggtagtcggtgtaaccgacgacgggatc 116
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
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>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete
             sequence
          Length = 87684

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 88    gggtagtcggtgtaaccgacgacgggatc 116
             ||||| ||||||||||||||||| |||||
Sbjct: 15021 gggtaatcggtgtaaccgacgactggatc 14993
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>gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete sequence
          Length = 1280

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 88   gggtagtcggtgtaaccgacgacgggatc 116
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
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>gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate reductase OPR1 and
            12-oxophytodienoate reductase OPR2 genes, complete cds
          Length = 7079

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 88   gggtagtcggtgtaaccgacgacgggatc 116
            ||||| ||||||||||||||||| |||||
Sbjct: 4615 gggtaatcggtgtaaccgacgactggatc 4587
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>dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a protein, complete cds
          Length = 1454

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 81   aagaaacgggtagtcggtgtaaccgacgacggg 113
            |||||| |||||||||||||| ||||| |||||
Sbjct: 1139 aagaaatgggtagtcggtgtagccgacaacggg 1107
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>emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chromosome 15, complete
             sequence
          Length = 149807

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   caggtcagggtttgccaggaa 200
             |||||||||||||||||||||
Sbjct: 70558 caggtcagggtttgccaggaa 70578
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>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 90   gtagtcggtgtaaccgacgacggg 113
            |||||| |||||||||||||||||
Sbjct: 1400 gtagtccgtgtaaccgacgacggg 1377
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>gb|AC165353.4| Mus musculus BAC clone RP23-167C2 from chromosome 3, complete sequence
          Length = 198393

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aagaaaaggttccatttgat 24
             ||||||||||||||||||||
Sbjct: 24462 aagaaaaggttccatttgat 24443
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    gggcagcagcctgtgcggca 331
              ||||||||||||||||||||
Sbjct: 983671 gggcagcagcctgtgcggca 983690
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>ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant protein
           (Afu4g13830) partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 279 tgcaatgaaggtgcccttgaaggc 302
           |||||||||||||||| |||||||
Sbjct: 264 tgcaatgaaggtgcccatgaaggc 241
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>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence
          Length = 199810

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tggttcaatgacacatcaag 79
             ||||||||||||||||||||
Sbjct: 70383 tggttcaatgacacatcaag 70364
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>gb|AF098985.2| Caenorhabditis elegans cosmid C08G5, complete sequence
          Length = 40550

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     aaaaagaaaaggttccattt 21
             ||||||||||||||||||||
Sbjct: 38262 aaaaagaaaaggttccattt 38281
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>emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chromosome 9, complete
             sequence
          Length = 44495

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ttttcacatggcaatatatg 43
             ||||||||||||||||||||
Sbjct: 17566 ttttcacatggcaatatatg 17547
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>emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821
          Length = 35452

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   catcctgttgtacttattaa 151
             ||||||||||||||||||||
Sbjct: 33192 catcctgttgtacttattaa 33173
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 242     ccgccttgtccccctcttcc 261
               ||||||||||||||||||||
Sbjct: 4004811 ccgccttgtccccctcttcc 4004830
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>gb|AE005923.1| Caulobacter crescentus CB15 section 249 of 359 of the complete genome
          Length = 6158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 395  ggtcattgagcttcgtggccatgtggaggccg 426
            |||||||||||||| ||||| ||| |||||||
Sbjct: 4657 ggtcattgagcttcatggccttgtagaggccg 4688
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>gb|AC048362.14| Mus musculus, clone RP23-105E2, complete sequence
          Length = 209211

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aaaaagaaaaggttccattt 21
             ||||||||||||||||||||
Sbjct: 84547 aaaaagaaaaggttccattt 84528
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>ref|NM_061403.1| Caenorhabditis elegans C08G5.6 (C08G5.6) mRNA, complete cds
          Length = 921

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 2   aaaaagaaaaggttccattt 21
           ||||||||||||||||||||
Sbjct: 770 aaaaagaaaaggttccattt 789
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>emb|BX934911.1| Gallus gallus finished cDNA, clone ChEST150h3
          Length = 1240

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 gcggcaccacccgccggccg 345
           ||||||||||||||||||||
Sbjct: 72  gcggcaccacccgccggccg 53
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>gb|AC000107.2|AC000107 Genomic sequence for Arabidopsis thaliana BAC F17F8 from chromosome I,
             complete sequence
          Length = 102393

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    tatatggatcaatcattatttatg 61
             ||||||||| ||||||||||||||
Sbjct: 27805 tatatggatgaatcattatttatg 27828
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>emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on chromosome 2, complete
             sequence
          Length = 228137

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   ctgtagggcagcagcctgtg 326
             ||||||||||||||||||||
Sbjct: 68961 ctgtagggcagcagcctgtg 68980
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>gb|AF099188.1|AF099188 Caulobacter crescentus cell division protein DivB (divB) gene,
            complete cds; and MurG (murG) gene, partial cds
          Length = 2475

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 395  ggtcattgagcttcgtggccatgtggaggccg 426
            |||||||||||||| ||||| ||| |||||||
Sbjct: 1301 ggtcattgagcttcatggccttgtagaggccg 1270
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>gb|AY106967.1| Zea mays PCO088243 mRNA sequence
          Length = 765

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 90  gtagtcggtgtaaccgacgacggg 113
           |||||| |||||||||||||||||
Sbjct: 571 gtagtccgtgtaaccgacgacggg 548
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>gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase Orb6p (orb6) gene, complete
            cds
          Length = 2344

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  catcctgttgtacttattaa 151
            ||||||||||||||||||||
Sbjct: 2289 catcctgttgtacttattaa 2270
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>gb|AC161251.3| Mus musculus BAC clone RP24-174C13 from chromosome 3, complete sequence
          Length = 151247

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aagaaaaggttccatttgat 24
             ||||||||||||||||||||
Sbjct: 37228 aagaaaaggttccatttgat 37247
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>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence
          Length = 190414

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     tggttcaatgacacatcaag 79
              ||||||||||||||||||||
Sbjct: 156206 tggttcaatgacacatcaag 156187
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>emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chromosome 4, complete
              sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    atgaaggtgcccttgaaggc 302
              ||||||||||||||||||||
Sbjct: 183740 atgaaggtgcccttgaaggc 183721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,872,348
Number of Sequences: 3902068
Number of extensions: 3872348
Number of successful extensions: 62992
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62799
Number of HSP's gapped (non-prelim): 185
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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