ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29h10 |
|---|---|
| Clone Library Name | barley_pub |
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 60.5 bits (145), Expect = 3e-09 Identities = 31/68 (45%), Positives = 41/68 (60%) Frame = -3 Query: 381 PNIEVDSWLRIPFYDMDFGGGRPFFFMPSYLPVEGLLILLPSFLGDGSVDAYVPLFSRDM 202 PN+ V+SW RIP+ MDFG G P FF S + +G L+PS GDGS+ + LFS + Sbjct: 377 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 436 Query: 201 NTFKNCCY 178 + FK Y Sbjct: 437 SLFKKYFY 444
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 60.5 bits (145), Expect = 3e-09 Identities = 31/68 (45%), Positives = 41/68 (60%) Frame = -3 Query: 381 PNIEVDSWLRIPFYDMDFGGGRPFFFMPSYLPVEGLLILLPSFLGDGSVDAYVPLFSRDM 202 PN+ V+SW RIP+ MDFG G P FF S + +G L+PS GDGS+ + LFS + Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 435 Query: 201 NTFKNCCY 178 + FK Y Sbjct: 436 SLFKKHFY 443
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 60.1 bits (144), Expect = 3e-09 Identities = 31/68 (45%), Positives = 41/68 (60%) Frame = -3 Query: 381 PNIEVDSWLRIPFYDMDFGGGRPFFFMPSYLPVEGLLILLPSFLGDGSVDAYVPLFSRDM 202 PN+ V+SW RIP+ MDFG G P FF S + +G L+PS GDGS+ + LFS + Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHL 435 Query: 201 NTFKNCCY 178 + FK Y Sbjct: 436 SRFKKYFY 443
>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)| Length = 474 Score = 33.9 bits (76), Expect = 0.26 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = -3 Query: 378 NIEVDSWLRIPFYDMDFGGGRPFFFM--PSYLPVEGLLILLPSFLGDGSVDAYVPLFSRD 205 N + SW R+ Y++DFG G+P + P+ P + + + G+G ++ + D Sbjct: 401 NFWISSWCRMGLYEIDFGWGKPIWVTVDPNIKPNKNCFFMNDTKCGEG-IEVWASFLEDD 459 Query: 204 MNTFK 190 M F+ Sbjct: 460 MAKFE 464
>TIP_PLAF7 (Q8I3H7) T-cell immunomodulatory protein homolog precursor| Length = 719 Score = 31.6 bits (70), Expect = 1.3 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -3 Query: 291 LPVEGLLILLPSFLGDGSVDAYVPLFSRDMNTFKN-CCYSLD*VPFARTCHVPMC 130 LP L +L F GDGS+D VP + ++F N CC S D + F +C Sbjct: 329 LPPNSLQVLFGDFNGDGSIDLVVPTCVK--SSFCNYCCVSDDKIYFIPNIQKKIC 381
>HCFC2_RAT (Q5RKG2) Host cell factor 2 (HCF-2) (C2 factor)| Length = 723 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 335 WTSAAGGHSSSCPATCRWRVCSSCCRLSWATAAWT 231 W G ++ + P C WR SS L+ TA WT Sbjct: 263 WVPHKGENTENSPHDCEWRCTSSFSYLNLDTAEWT 297
>TIP_PLAYO (Q7RRM4) T-cell immunomodulatory protein homolog precursor| Length = 701 Score = 30.8 bits (68), Expect = 2.2 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Frame = -3 Query: 291 LPVEGLLILLPSFLGDGSVDAYVPLFSRDMNTFKNCCYSLD*VPFARTCHVPMC--AW-- 124 LP + IL F DGS+D VP + ++ CC S D + F +C +W Sbjct: 311 LPANSMQILFADFNADGSIDMVVPTCVKS-SSCNYCCTSDDKIYFIPNIQTKICENSWTK 369 Query: 123 -----CRINVSHLPSSIFE 82 CR+ + S FE Sbjct: 370 NEDNKCRLASNLCSESDFE 388
>VID21_USTMA (Q4P209) Chromatin modification-related protein VID21| Length = 1654 Score = 30.4 bits (67), Expect = 2.9 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 229 GVHAAVAQERRQQDEQTLHRQVAGHEEEWPPAAEVHVVERDPQ 357 G + A+AQ+ +QQ +Q +Q A + + PPAA ++ Q Sbjct: 1276 GTNQAIAQQTQQQQQQPQSQQTAQMQVQQPPAAAAAAQQQQQQ 1318
>SYL_BRAJA (Q89WQ1) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 874 Score = 30.4 bits (67), Expect = 2.9 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%) Frame = -2 Query: 505 SREVARINDGYFKS----FIDFANSGAVEKERLVATADAADMVL 386 SRE+A + Y+K F+DF +G E+E+ D DM + Sbjct: 123 SREIATCDPSYYKHQQKMFLDFLRAGLAEREKRKVNWDPVDMTV 166
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 30.4 bits (67), Expect = 2.9 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = -1 Query: 359 GCGSRSTTWTSAAGGHSSS---CPATCRWRVCSSCCRLSWATAAWTPTC 222 GCGS S GG SSS C + C VC CC+ +W P C Sbjct: 30 GCGSGRGGCGSGCGGCSSSCGGCGSRCYVPVC--CCK---PVCSWVPAC 73
>KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated| protein 4.12) (Ultrahigh sulfur keratin-associated protein 4.12) Length = 201 Score = 30.4 bits (67), Expect = 2.9 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 7/37 (18%) Frame = -1 Query: 311 SSSCPATCRWRVCSSCC-------RLSWATAAWTPTC 222 SS CP+ C C CC R+S T + PTC Sbjct: 149 SSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPTC 185
>SLT11_ASHGO (Q750K9) Pre-mRNA-splicing factor SLT11| Length = 331 Score = 30.0 bits (66), Expect = 3.8 Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = -2 Query: 412 TADAADM-VLSPKHRGGQLAADPVLR-HGLRRRAAILLHAQLPAGGGSAHPAA 260 TAD+A + L K R AA P R HG R A + QLP GG A PA+ Sbjct: 120 TADSAPLRELMGKMRAVAAAAAPAARAHGGREDAGEVPETQLPFGGALATPAS 172
>VIT_BOMMO (Q27309) Vitellogenin precursor [Contains: Vitellin light chain| (VL); Vitellin light chain rare isoform; Vitellin heavy chain rare isoform; Vitellin heavy chain (VH)] Length = 1782 Score = 29.6 bits (65), Expect = 5.0 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = -2 Query: 310 LLHAQLPAGGGSAHPAAVFLGRRQRGRLRATL-*PRHEHLQELLLQPRLGPV-CTYLPCA 137 L H Q GSA A + + GRL+A L P+H + E L PR PV Y P Sbjct: 49 LAHLQEGPSSGSAFKAQFTIRVKSPGRLQAKLENPQHGNFNEQLPDPRELPVDLKYQPTP 108 Query: 136 NV 131 N+ Sbjct: 109 NI 110
>IF2_BARQU (Q6G0P2) Translation initiation factor IF-2| Length = 845 Score = 29.6 bits (65), Expect = 5.0 Identities = 18/80 (22%), Positives = 35/80 (43%) Frame = -2 Query: 427 ERLVATADAADMVLSPKHRGGQLAADPVLRHGLRRRAAILLHAQLPAGGGSAHPAAVFLG 248 E ++ A+ D+ PK + + L G A +L+ G+ HP+ + + Sbjct: 500 EAILLQAELLDLKADPKRTAEGVVIEAKLDRGRGSVATVLVQK------GTLHPSDIIVA 553 Query: 247 RRQRGRLRATL*PRHEHLQE 188 + GR+RA + H++E Sbjct: 554 GNEWGRVRALIDDHGRHVKE 573
>AYT1_YEAST (Q12226) Trichothecene 3-O-acetyltransferase (EC 2.3.1.-)| Length = 474 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Frame = -3 Query: 375 IEVDSWLRIPFYDMDF--GGGRP-FFFMPSYLPVEGLLILLP 259 I V SW ++ YD+DF G G+P P ++ +E L+ +P Sbjct: 398 IMVSSWAKVSLYDVDFNLGLGKPKSVRRPRFISLESLIYFMP 439
>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = -2 Query: 361 LAADPVLRHGLRRRAAILLHAQLPAGGGSA----------HPAAVFLGRRQRGRLRATL* 212 L ADP R +++ AQL G GS HP + + + GR+RA + Sbjct: 625 LKADPD-----RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVN 679 Query: 211 PRHEHLQE 188 R EH++E Sbjct: 680 DRGEHVKE 687
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = -2 Query: 361 LAADPVLRHGLRRRAAILLHAQLPAGGGSA----------HPAAVFLGRRQRGRLRATL* 212 L ADP R +++ AQL G GS HP + + + GR+RA + Sbjct: 625 LKADPD-----RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVN 679 Query: 211 PRHEHLQE 188 R EH++E Sbjct: 680 DRGEHVKE 687
>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = -2 Query: 361 LAADPVLRHGLRRRAAILLHAQLPAGGGSA----------HPAAVFLGRRQRGRLRATL* 212 L ADP R +++ AQL G GS HP + + + GR+RA + Sbjct: 625 LKADPD-----RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVN 679 Query: 211 PRHEHLQE 188 R EH++E Sbjct: 680 DRGEHVKE 687
>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Frame = -2 Query: 361 LAADPVLRHGLRRRAAILLHAQLPAGGGSA----------HPAAVFLGRRQRGRLRATL* 212 L ADP R +++ AQL G GS HP + + + GR+RA + Sbjct: 625 LKADPD-----RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVN 679 Query: 211 PRHEHLQE 188 R EH++E Sbjct: 680 DRGEHVKE 687
>CSF3R_HUMAN (Q99062) Granulocyte colony-stimulating factor receptor precursor| (G-CSF-R) (CD114 antigen) Length = 836 Score = 29.3 bits (64), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +1 Query: 298 GHEEEWPPAAEVHVVERDPQPAVHLDVW 381 GH +W P+ E+ ER P V LD W Sbjct: 316 GHWSDWSPSLELRTTER--APTVRLDTW 341
>HCFC2_HUMAN (Q9Y5Z7) Host cell factor 2 (HCF-2) (C2 factor)| Length = 792 Score = 29.3 bits (64), Expect = 6.5 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -1 Query: 335 WTSAAGGHSSSCPATCRWRVCSSCCRLSWATAAWT 231 W G ++ + P C WR SS L+ T WT Sbjct: 263 WVPHKGENTETSPHDCEWRCTSSFSYLNLDTTEWT 297
>CAP7_ARATH (Q9LVD8) Putative clathrin assembly protein At5g57200| Length = 591 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +1 Query: 253 ERRQQDEQTLHRQVAGHEEEWPPAAEVHVVERDPQPAVHLD 375 E Q+E T + Q EEE P E+ V E P P + D Sbjct: 341 EEENQNENTENDQPLIEEEEEEPKEEIEVEEAKPSPLIDTD 381
>SERA_THASE (Q9S1H0) Selenate reductase alpha subunit precursor (EC 1.97.1.9)| (Selenate reductase molybdenum subunit) Length = 918 Score = 28.9 bits (63), Expect = 8.5 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%) Frame = -2 Query: 505 SREVARINDGYFKSFID-------FANSGAVEKERLVATADAADMVLSPKHRGGQLAADP 347 +R + R++D KSFID F +GAVEK+ DA V+ G + + Sbjct: 653 ARGITRVDDPEIKSFIDFDKVYDEFTMNGAVEKDE-----DALRFVMEKSKALGPGSYEE 707 Query: 346 VLRHG 332 VL+ G Sbjct: 708 VLKRG 712
>RS9_BACCR (Q81J12) 30S ribosomal protein S9| Length = 130 Score = 28.9 bits (63), Expect = 8.5 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -2 Query: 487 INDGYFKSFIDFANSGAVEKERLVATADAADM-VLSPKHRGGQLAADPVLRHGLRR 323 IN F+++I FA V K+ LVAT + VL + GG +RHG+ R Sbjct: 30 INGRDFENYIPFAALREVVKQPLVATETLGNYDVLVNVNGGGYTGQAGAIRHGISR 85
>RS9_BACAN (Q81VP8) 30S ribosomal protein S9| Length = 130 Score = 28.9 bits (63), Expect = 8.5 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -2 Query: 487 INDGYFKSFIDFANSGAVEKERLVATADAADM-VLSPKHRGGQLAADPVLRHGLRR 323 IN F+++I FA V K+ LVAT + VL + GG +RHG+ R Sbjct: 30 INGRDFENYIPFAALREVVKQPLVATETLGNYDVLVNVNGGGYTGQAGAIRHGISR 85
>YBU5_YEAST (P38255) Protein YBR095C| Length = 453 Score = 28.9 bits (63), Expect = 8.5 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = -3 Query: 333 DFGGGRPFFFMPSYLPVEGLLILLPSFLGDGSVDAYVPLFSRDMN 199 +FG PFF +P LL LLPS G S+ + +N Sbjct: 304 EFGEEDPFFALPRLEQSNALLSLLPSSSGSASISTLTAAEQQQLN 348
>EFG_CORDI (Q6NJD6) Elongation factor G (EF-G)| Length = 704 Score = 28.9 bits (63), Expect = 8.5 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -2 Query: 457 DFANSGAVEKERLVATADAADMVLSPKHRGGQLAADPVLRHGLRR 323 D A+ A +E+LV T +D L K+ GG+ L+ G+R+ Sbjct: 202 DLADKAAEYREKLVETVAESDEALMEKYFGGEELTIEELKAGIRK 246
>UVRD_MYCPN (P75437) Probable DNA helicase II homolog (EC 3.6.1.-)| Length = 715 Score = 28.9 bits (63), Expect = 8.5 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -2 Query: 505 SREVARINDGYFKSFIDFANSGAVEKERLVATADAADMVLSPKHRGGQL 359 S++V +I DG+ ++ DF + + ERLV + + L P+ R QL Sbjct: 127 SQKVLQIIDGFKNAYFDFDTNSLKDDERLV---ELCEFHLDPQERNFQL 172 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,052,772 Number of Sequences: 219361 Number of extensions: 1232177 Number of successful extensions: 4027 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3882 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4024 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
