Clone Name | rbart29h10 |
---|---|
Clone Library Name | barley_pub |
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete cds Length = 1508 Score = 940 bits (474), Expect = 0.0 Identities = 487/490 (99%), Gaps = 1/490 (0%) Strand = Plus / Minus Query: 20 tgaaagattaaaacttcgtttatttactcttccaaaacagaatggataattgaatcaaga 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1473 tgaaagattaaaacttcgtttatttactcttccaaaacagaatggataattgaatcaaga 1414 Query: 80 acttcaaaaatagaactaggcaagtggctaacgttgatccgacaccaggcacacattggc 139 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1413 acttcaaaaataaaactaggcaagtggctaacgttgatccgacaccaggcacacattggc 1354 Query: 140 acatggcaggtacgtgcaaacgggacctagtcgaggctgtagcagcagttcttgaaggtg 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1353 acatggcaggtacgtgcaaacgggacctagtcgaggctgtagcagcagttcttgaaggtg 1294 Query: 200 ttcatgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtcgcccaagaaagac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1293 ttcatgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtcgcccaagaaagac 1234 Query: 260 ggcagcaggatgagcagaccctccaccggcaggtagctgggcatgaagaagaatggccgc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 ggcagcaggatgagcagaccctccaccggcaggtagctgggcatgaagaagaatggccgc 1174 Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttt 379 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1173 ccgccgccgaagtccatgtcgtagaacgggatcagcagccagctgtccacctcgatg-tt 1115 Query: 380 ggggctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctccttctccaccgc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 ggggctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctccttctccaccgc 1055 Query: 440 gccggagttggcgaagtcgatgaaggacttgaagtagccatcgttgatccgggccacctc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 gccggagttggcgaagtcgatgaaggacttgaagtagccatcgttgatccgggccacctc 995 Query: 500 cctgctgatg 509 |||||||||| Sbjct: 994 cctgctgatg 985
>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA, partial cds Length = 1220 Score = 571 bits (288), Expect = e-160 Identities = 369/392 (94%), Gaps = 3/392 (0%) Strand = Plus / Minus Query: 110 acgttgatccgacaccaggcacacattggcacatggcaggtacgtgcaaacgggacctag 169 |||| |||||||||||| ||||||||| |||| |||||||||||| ||| ||| | |||| Sbjct: 1116 acgtcgatccgacaccacgcacacatttgcacttggcaggtacgt-caagcgg-agctag 1059 Query: 170 tcgaggctgtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtag 229 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1058 tcgagggtgtagcagcagttcttgaaagtgttcatgtcgcggctaaagagtggcacgtag 999 Query: 230 gcgtccacgctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggc 289 ||| |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 998 gcgcccacgctgccgtcgcccaagaaggacggtagcaggatgagcaggccctccaccggc 939 Query: 290 aggtagctgggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacggg 349 ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| Sbjct: 938 aggtagctgggcatgaagaagaagggccggccgccgccgaggtccatgtcgtagaacggg 879 Query: 350 atccgcagccagctgtccacctcgatgtttggggctcagcaccatgtccgccgcgtcggc 409 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 878 atccgcagccagctgtccacctcgatg-ttggggctcagcaccatgtccgccgcgtcggc 820 Query: 410 cgtcgccaccagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggactt 469 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 819 cgtcgccaccagccgttccttctccaccgtgccggagttggcgaagtcgatgaaggactt 760 Query: 470 gaagtagccatcgttgatccgggccacctccc 501 ||||||||| |||||||| |||| |||||||| Sbjct: 759 gaagtagccgtcgttgatacgggacacctccc 728 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 67 aattgaatcaagaacttcaaaaatagaactaggcaagt 104 ||||||||||||||||||||||||| |||||||||||| Sbjct: 1188 aattgaatcaagaacttcaaaaatacaactaggcaagt 1151
>ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 460 bits (232), Expect = e-126 Identities = 302/324 (93%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 178 gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 237 ||||||||||||||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct: 1257 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1198 Query: 238 gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 297 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1197 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1138 Query: 298 gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 357 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1137 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 1078 Query: 358 ccagctgtccacctcgatgtttggggctcagcaccatgtccgccgcgtcggccgtcgcca 417 ||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||| Sbjct: 1077 ccagctgtccacctcgatg-ttcgggctcagcaccatctccgccgcgtcggccgacgcca 1019 Query: 418 ccagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagc 477 |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1018 ccagccgctcctcctccaccgcaccggagttggcgaagtcgatgaacgacttgaagtagc 959 Query: 478 catcgttgatccgggccacctccc 501 | |||||||||||| |||||||| Sbjct: 958 cgtcgttgatccggatcacctccc 935
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 460 bits (232), Expect = e-126 Identities = 302/324 (93%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 178 gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 237 ||||||||||||||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct: 11597 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 11538 Query: 238 gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 297 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 11537 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 11478 Query: 298 gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 357 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 11477 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 11418 Query: 358 ccagctgtccacctcgatgtttggggctcagcaccatgtccgccgcgtcggccgtcgcca 417 ||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||| Sbjct: 11417 ccagctgtccacctcgatg-ttcgggctcagcaccatctccgccgcgtcggccgacgcca 11359 Query: 418 ccagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagc 477 |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 11358 ccagccgctcctcctccaccgcaccggagttggcgaagtcgatgaacgacttgaagtagc 11299 Query: 478 catcgttgatccgggccacctccc 501 | |||||||||||| |||||||| Sbjct: 11298 cgtcgttgatccggatcacctccc 11275 Score = 402 bits (203), Expect = e-109 Identities = 291/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 179 tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 238 |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||| Sbjct: 13909 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 13968 Query: 239 ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 298 ||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 13969 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 14028 Query: 299 ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 358 ||| |||| | ||||||| | |||| ||||||||| | ||||||||||||||||||||| Sbjct: 14029 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 14088 Query: 359 cagctgtccacctcgatgtttggggctcagcaccatgtccgccgcgtcggccgtcgccac 418 |||||||||||||||||| || |||||||||||||| |||||||||||||||| |||||| Sbjct: 14089 cagctgtccacctcgatg-ttcgggctcagcaccatctccgccgcgtcggccgacgccac 14147 Query: 419 cagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcc 478 ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 14148 cagccgctcctcctccaccgcgccggagttggcgaagtcgacgaacgacttgaagtagcc 14207 Query: 479 atcgttgatccgggccacc 497 ||||||||||| |||||| Sbjct: 14208 gtcgttgatccgtgccacc 14226
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 460 bits (232), Expect = e-126 Identities = 302/324 (93%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 178 gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 237 ||||||||||||||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct: 33960700 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 33960641 Query: 238 gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 297 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 33960640 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 33960581 Query: 298 gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 357 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 33960580 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 33960521 Query: 358 ccagctgtccacctcgatgtttggggctcagcaccatgtccgccgcgtcggccgtcgcca 417 ||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||| Sbjct: 33960520 ccagctgtccacctcgatg-ttcgggctcagcaccatctccgccgcgtcggccgacgcca 33960462 Query: 418 ccagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagc 477 |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 33960461 ccagccgctcctcctccaccgcaccggagttggcgaagtcgatgaacgacttgaagtagc 33960402 Query: 478 catcgttgatccgggccacctccc 501 | |||||||||||| |||||||| Sbjct: 33960401 cgtcgttgatccggatcacctccc 33960378 Score = 402 bits (203), Expect = e-109 Identities = 291/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 179 tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 238 |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||| Sbjct: 33963012 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 33963071 Query: 239 ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 298 ||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 33963072 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 33963131 Query: 299 ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 358 ||| |||| | ||||||| | |||| ||||||||| | ||||||||||||||||||||| Sbjct: 33963132 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 33963191 Query: 359 cagctgtccacctcgatgtttggggctcagcaccatgtccgccgcgtcggccgtcgccac 418 |||||||||||||||||| || |||||||||||||| |||||||||||||||| |||||| Sbjct: 33963192 cagctgtccacctcgatg-ttcgggctcagcaccatctccgccgcgtcggccgacgccac 33963250 Query: 419 cagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcc 478 ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 33963251 cagccgctcctcctccaccgcgccggagttggcgaagtcgacgaacgacttgaagtagcc 33963310 Query: 479 atcgttgatccgggccacc 497 ||||||||||| |||||| Sbjct: 33963311 gtcgttgatccgtgccacc 33963329
>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full insert sequence Length = 1640 Score = 460 bits (232), Expect = e-126 Identities = 302/324 (93%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 178 gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 237 ||||||||||||||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct: 1411 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1352 Query: 238 gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 297 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1351 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1292 Query: 298 gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 357 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1291 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 1232 Query: 358 ccagctgtccacctcgatgtttggggctcagcaccatgtccgccgcgtcggccgtcgcca 417 ||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||| Sbjct: 1231 ccagctgtccacctcgatg-ttcgggctcagcaccatctccgccgcgtcggccgacgcca 1173 Query: 418 ccagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagc 477 |||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1172 ccagccgctcctcctccaccgcaccggagttggcgaagtcgatgaacgacttgaagtagc 1113 Query: 478 catcgttgatccgggccacctccc 501 | |||||||||||| |||||||| Sbjct: 1112 cgtcgttgatccggatcacctccc 1089
>ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 402 bits (203), Expect = e-109 Identities = 291/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 179 tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 238 |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||| Sbjct: 1328 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 1269 Query: 239 ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 298 ||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1268 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 1209 Query: 299 ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 358 ||| |||| | ||||||| | |||| ||||||||| | ||||||||||||||||||||| Sbjct: 1208 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 1149 Query: 359 cagctgtccacctcgatgtttggggctcagcaccatgtccgccgcgtcggccgtcgccac 418 |||||||||||||||||| || |||||||||||||| |||||||||||||||| |||||| Sbjct: 1148 cagctgtccacctcgatg-ttcgggctcagcaccatctccgccgcgtcggccgacgccac 1090 Query: 419 cagccgctccttctccaccgcgccggagttggcgaagtcgatgaaggacttgaagtagcc 478 ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 1089 cagccgctcctcctccaccgcgccggagttggcgaagtcgacgaacgacttgaagtagcc 1030 Query: 479 atcgttgatccgggccacc 497 ||||||||||| |||||| Sbjct: 1029 gtcgttgatccgtgccacc 1011
>ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 215 aagagtggcacgtaggcgtccacgctgccgtcgcc 249 ||||||||||||||| |||| | |||||||||||| Sbjct: 1340 aagagtggcacgtagacgtcgatgctgccgtcgcc 1306 Score = 44.1 bits (22), Expect = 0.44 Identities = 49/58 (84%) Strand = Plus / Minus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 377 |||||||||||||| | ||||||||| || | |||||||||||||||||| |||| Sbjct: 1235 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 1178
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcga 374 |||||||||||||| | |||||||| ||| | |||||||||||||||||||| Sbjct: 76714 ccgccgccgaagtcgagctcgtagaagtcgatgcccagccagctgtccacctcga 76768
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 215 aagagtggcacgtaggcgtccacgctgccgtcgcc 249 ||||||||||||||| |||| | |||||||||||| Sbjct: 26918691 aagagtggcacgtagacgtcgatgctgccgtcgcc 26918657 Score = 44.1 bits (22), Expect = 0.44 Identities = 49/58 (84%) Strand = Plus / Minus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 377 |||||||||||||| | ||||||||| || | |||||||||||||||||| |||| Sbjct: 26918586 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 26918529
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 215 aagagtggcacgtaggcgtccacgctgccgtcgcc 249 ||||||||||||||| |||| | |||||||||||| Sbjct: 97691 aagagtggcacgtagacgtcgatgctgccgtcgcc 97657 Score = 44.1 bits (22), Expect = 0.44 Identities = 49/58 (84%) Strand = Plus / Minus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 377 |||||||||||||| | ||||||||| || | |||||||||||||||||| |||| Sbjct: 97586 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 97529
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcga 374 |||||||||||||| | |||||||| ||| | |||||||||||||||||||| Sbjct: 872290 ccgccgccgaagtcgagctcgtagaagtcgatgcccagccagctgtccacctcga 872344
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 215 aagagtggcacgtaggcgtccacgctgccgtcgcc 249 ||||||||||||||| |||| | |||||||||||| Sbjct: 27010014 aagagtggcacgtagacgtcgatgctgccgtcgcc 27009980 Score = 44.1 bits (22), Expect = 0.44 Identities = 49/58 (84%) Strand = Plus / Minus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 377 |||||||||||||| | ||||||||| || | |||||||||||||||||| |||| Sbjct: 27009909 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 27009852
>gb|AC167126.6| Mus musculus chromosome 1, clone RP24-104I19, complete sequence Length = 156900 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 gaaaaataatctccatctgaaa 24 |||||||||||||||||||||| Sbjct: 34137 gaaaaataatctccatctgaaa 34116
>gb|AC167168.5| Mus musculus chromosome 1, clone RP23-100P14, complete sequence Length = 204256 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 gaaaaataatctccatctgaaa 24 |||||||||||||||||||||| Sbjct: 16233 gaaaaataatctccatctgaaa 16254
>gb|AC147379.3| Pan troglodytes BAC clone RP43-175C18 from 7, complete sequence Length = 219482 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 aataatctccatctgaaagatt 28 |||||||||||||||||||||| Sbjct: 99001 aataatctccatctgaaagatt 98980
>gb|AC145990.3| Pan troglodytes BAC clone RP43-168N19 from 7, complete sequence Length = 144496 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 aataatctccatctgaaagatt 28 |||||||||||||||||||||| Sbjct: 135787 aataatctccatctgaaagatt 135766
>gb|AC073323.5| Homo sapiens BAC clone RP11-332K15 from 7, complete sequence Length = 133911 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 aataatctccatctgaaagatt 28 |||||||||||||||||||||| Sbjct: 51878 aataatctccatctgaaagatt 51857
>gb|AC169668.1| Mus musculus chromosome 1, clone RP23-317J12, complete sequence Length = 224712 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 gaaaaataatctccatctgaaa 24 |||||||||||||||||||||| Sbjct: 1501 gaaaaataatctccatctgaaa 1480
>ref|XM_450191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1359 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Minus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctc 372 |||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct: 1205 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctc 1153
>emb|AJ831467.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype LL-0 Length = 2478 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 717 tcgtttatttactcttccaaa 697
>emb|AJ831466.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype LER-1 Length = 2476 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 715 tcgtttatttactcttccaaa 695
>emb|AJ831465.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype BA-1 Length = 2419 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 639 tcgtttatttactcttccaaa 619
>emb|AJ831464.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype WL-0 Length = 2474 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831463.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype TSU-1 Length = 2441 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831462.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype TAC Length = 2445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 641 tcgtttatttactcttccaaa 621
>emb|AJ831461.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype TA-0 Length = 2450 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 643 tcgtttatttactcttccaaa 623
>emb|AJ831459.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype SEI-0 Length = 2442 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831458.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype RSCH-0 Length = 2452 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 644 tcgtttatttactcttccaaa 624
>emb|AJ831457.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype PI-0 Length = 2444 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831456.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype PET-1 Length = 2439 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 635 tcgtttatttactcttccaaa 615
>emb|AJ831455.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype PER-1 Length = 2445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 642 tcgtttatttactcttccaaa 622
>emb|AJ831454.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype NO-0 Length = 2449 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831453.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype MT-0 Length = 2444 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 639 tcgtttatttactcttccaaa 619
>emb|AJ831452.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype MRK-0 Length = 2440 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 636 tcgtttatttactcttccaaa 616
>emb|AJ831451.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype MR-0 Length = 2445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 640 tcgtttatttactcttccaaa 620
>emb|AJ831450.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype MH-0 Length = 2452 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 640 tcgtttatttactcttccaaa 620
>emb|AJ831449.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype LIP-0 Length = 2440 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 639 tcgtttatttactcttccaaa 619
>emb|AJ831448.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype HODJA Length = 2454 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 645 tcgtttatttactcttccaaa 625
>emb|AJ831447.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype EI-2 Length = 2450 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 644 tcgtttatttactcttccaaa 624
>emb|AJ831446.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype DB-1 Length = 2445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 640 tcgtttatttactcttccaaa 620
>emb|AJ831445.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype CVI-0 Length = 2473 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 642 tcgtttatttactcttccaaa 622
>emb|AJ831444.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype CAL-0 Length = 2451 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 639 tcgtttatttactcttccaaa 619
>emb|AJ831443.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype AG-0 Length = 2443 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 640 tcgtttatttactcttccaaa 620
>emb|AJ831442.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype KA-0 Length = 2434 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 629 tcgtttatttactcttccaaa 609
>emb|AJ831441.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype ABD-0 Length = 2457 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 647 tcgtttatttactcttccaaa 627
>emb|AJ831440.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype COL-0 Length = 2489 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 724 tcgtttatttactcttccaaa 704
>emb|CR352207.9| Zebrafish DNA sequence from clone CH211-110B5 in linkage group 7, complete sequence Length = 180005 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 gtttatttactcttccaaaac 57 ||||||||||||||||||||| Sbjct: 103054 gtttatttactcttccaaaac 103074
>emb|BX537251.10| Zebrafish DNA sequence from clone DKEY-249G23 in linkage group 9, complete sequence Length = 169308 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 gtttatttactcttccaaaac 57 ||||||||||||||||||||| Sbjct: 81226 gtttatttactcttccaaaac 81206
>emb|BX027057.1|CNS08T1H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 279 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 gcgtcggccgtcgccaccagc 422 ||||||||||||||||||||| Sbjct: 131 gcgtcggccgtcgccaccagc 111
>emb|X79194.1|ATTGG1 A.thaliana TGG1 gene for myrosinase Length = 5023 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 2559 tcgtttatttactcttccaaa 2539
>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10 Length = 99967 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 agtggctaacgttgatccgacacca 126 |||||||||||| |||||||||||| Sbjct: 33123 agtggctaacgtcgatccgacacca 33147
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gccgtcgccaccagccgctcc 428 ||||||||||||||||||||| Sbjct: 100054 gccgtcgccaccagccgctcc 100074
>dbj|AK089687.2| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830008L10 product:interleukin 13 receptor, alpha 2, full insert sequence Length = 2206 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ctcttccaaaacagaatggat 66 ||||||||||||||||||||| Sbjct: 213 ctcttccaaaacagaatggat 193
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Minus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctc 372 |||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct: 21163512 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctc 21163460
>emb|AL807780.7| Mouse DNA sequence from clone RP23-456P12 on chromosome X, complete sequence Length = 158108 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ctcttccaaaacagaatggat 66 ||||||||||||||||||||| Sbjct: 34748 ctcttccaaaacagaatggat 34768
>ref|XM_315590.2| Anopheles gambiae str. PEST ENSANGP00000017720 (ENSANGG00000015231), partial mRNA Length = 966 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 gcgtcggccgtcgccaccagc 422 ||||||||||||||||||||| Sbjct: 820 gcgtcggccgtcgccaccagc 840
>gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24 Length = 127053 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tcgtttatttactcttccaaa 55 ||||||||||||||||||||| Sbjct: 64558 tcgtttatttactcttccaaa 64538
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Minus Query: 320 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctc 372 |||||||||||||| | ||||||||||||| ||||||||||||||||| Sbjct: 34269 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctc 34217
>ref|XM_633465.1| Dictyostelium discoideum hypothetical protein (DDB0218618), partial mRNA Length = 1587 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tgaatcaagaacttcaaaaa 89 |||||||||||||||||||| Sbjct: 1145 tgaatcaagaacttcaaaaa 1164
>gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequence Length = 37154 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 caagaaagacggcagcagga 269 |||||||||||||||||||| Sbjct: 2399 caagaaagacggcagcagga 2418
>gb|AC144673.3| Mus musculus BAC clone RP23-40K14 from chromosome 14, complete sequence Length = 162333 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttaaaacttcgtttatttac 46 |||||||||||||||||||| Sbjct: 115760 ttaaaacttcgtttatttac 115741
>gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section 94 of 121 of the complete plasmid sequence Length = 10943 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 tcggccgtcgccaccagccg 424 |||||||||||||||||||| Sbjct: 2761 tcggccgtcgccaccagccg 2742
>gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein mRNA, complete cds Length = 2068 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 caagaaagacggcagcagga 269 |||||||||||||||||||| Sbjct: 372 caagaaagacggcagcagga 391
>emb|AJ231133.1|SOF231133 Saccharum officinarum mRNA for caffeic acid 3-O-methyltransferase Length = 1486 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 caccatgtccgccgcgtcgg 408 |||||||||||||||||||| Sbjct: 335 caccatgtccgccgcgtcgg 316
>gb|AY365419.1| Saccharum hybrid cultivar caffeic acid 3-O-methyltransferase (COMT) gene, complete cds Length = 2012 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 caccatgtccgccgcgtcgg 408 |||||||||||||||||||| Sbjct: 231 caccatgtccgccgcgtcgg 212
>emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chromosome 13, complete sequence Length = 236130 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 atctgaaagattaaaacttc 36 |||||||||||||||||||| Sbjct: 31924 atctgaaagattaaaacttc 31905
>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain DSM 40236 Length = 90600 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ccgcgccggagttggcgaag 455 |||||||||||||||||||| Sbjct: 67462 ccgcgccggagttggcgaag 67443
>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24 Length = 314450 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ttgaagtagccatcgttgat 487 |||||||||||||||||||| Sbjct: 74867 ttgaagtagccatcgttgat 74886
>gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, complete sequence Length = 143534 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ttactcttccaaaacagaat 62 |||||||||||||||||||| Sbjct: 112095 ttactcttccaaaacagaat 112076
>gb|U13072.1| Caenorhabditis elegans cosmid C07D10, complete sequence Length = 27935 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ttgaatcaagaacttcaaaa 88 |||||||||||||||||||| Sbjct: 19499 ttgaatcaagaacttcaaaa 19518
>ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 caagaaagacggcagcagga 269 |||||||||||||||||||| Sbjct: 637 caagaaagacggcagcagga 656
>ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, complete cds Length = 1848 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 caagaaagacggcagcagga 269 |||||||||||||||||||| Sbjct: 637 caagaaagacggcagcagga 656
>ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA Length = 2068 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 caagaaagacggcagcagga 269 |||||||||||||||||||| Sbjct: 372 caagaaagacggcagcagga 391
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 ccgccgcgtcggccgtcgccacca 420 ||||||||||| |||||||||||| Sbjct: 29600703 ccgccgcgtcgcccgtcgccacca 29600726
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 429 ttctccaccgcgccggagttggcg 452 |||||||||||||||||| ||||| Sbjct: 3905736 ttctccaccgcgccggaggtggcg 3905713
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 ccgccgcgtcggccgtcgccacca 420 ||||||||||| |||||||||||| Sbjct: 44288 ccgccgcgtcgcccgtcgccacca 44311
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ccgcgccggagttggcgaag 455 |||||||||||||||||||| Sbjct: 5074056 ccgcgccggagttggcgaag 5074037
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 ccgccgcgtcggccgtcgccacca 420 ||||||||||| |||||||||||| Sbjct: 165209 ccgccgcgtcgcccgtcgccacca 165232
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 451 cgaagtcgatgaaggacttgaagt 474 |||||| ||||||||||||||||| Sbjct: 1462631 cgaagtagatgaaggacttgaagt 1462654
>dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655M14, complete sequences Length = 174074 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 aggcacacattggcacatgg 145 |||||||||||||||||||| Sbjct: 72264 aggcacacattggcacatgg 72245 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,488,325 Number of Sequences: 3902068 Number of extensions: 4488325 Number of successful extensions: 97717 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 96993 Number of HSP's gapped (non-prelim): 710 length of query: 509 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 487 effective length of database: 17,147,199,772 effective search space: 8350686288964 effective search space used: 8350686288964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)