ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29h04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 298 gaggagttgaccggcaggctcttcagattctcgaagctacacatggccacgacctcctcc 357 |||||||| ||||| |||| |||| ||||||||||| |||| ||| |||||||| Sbjct: 833 gaggagttcaccggtaggcggctcagcttctcgaagctgcacagcctcaccacctcctcg 774 Query: 358 acggccccgccgctgacctcctcgtcggtgaacgggacgcggaggaagtcggcaagcatc 417 ||| | ||| || |||||| |||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 acgacgccggcgtcgacctcatcgtcggtgaacgggacgcggaggaactcggcgagcttc 714 Query: 418 ttgacgtgcttgcccgcgtcggccatcatgtcgtcgtacttgaggaagaggaccctgtcg 477 |||||||| | ||| ||||||||||||||||||||||||||||||||| || |||||| Sbjct: 713 ttgacgtggccggccgggtcggccatcatgtcgtcgtacttgaggaagagaactctgtcg 654 Query: 478 ggctcc 483 |||||| Sbjct: 653 ggctcc 648 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 142 aaggtgagaccagaacctctcagcttctc 170 |||||||||||||| ||| |||||||||| Sbjct: 995 aaggtgagaccagatcctttcagcttctc 967
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 298 gaggagttgaccggcaggctcttcagattctcgaagctacacatggccacgacctcctcc 357 |||||||| ||||| |||| |||| ||||||||||| |||| ||| |||||||| Sbjct: 25557367 gaggagttcaccggtaggcggctcagcttctcgaagctgcacagcctcaccacctcctcg 25557426 Query: 358 acggccccgccgctgacctcctcgtcggtgaacgggacgcggaggaagtcggcaagcatc 417 ||| | ||| || |||||| |||||||||||||||||||||||||| ||||| ||| || Sbjct: 25557427 acgacgccggcgtcgacctcatcgtcggtgaacgggacgcggaggaactcggcgagcttc 25557486 Query: 418 ttgacgtgcttgcccgcgtcggccatcatgtcgtcgtacttgaggaagaggaccctgtcg 477 |||||||| | ||| ||||||||||||||||||||||||||||||||| || |||||| Sbjct: 25557487 ttgacgtggccggccgggtcggccatcatgtcgtcgtacttgaggaagagaactctgtcg 25557546 Query: 478 ggctcc 483 |||||| Sbjct: 25557547 ggctcc 25557552 Score = 133 bits (67), Expect = 6e-28 Identities = 184/223 (82%) Strand = Plus / Plus Query: 281 tccgatcagacacccctgaggagttgaccggcaggctcttcagattctcgaagctacaca 340 |||||||| |||||| |||||||| || || |||| |||| ||||||||||| |||| Sbjct: 25527666 tccgatcaaccaccccggaggagttcacgggtaggcggctcagcttctcgaagctgcaca 25527725 Query: 341 tggccacgacctcctccacggccccgccgctgacctcctcgtcggtgaacgggacgcgga 400 ||| |||||||| ||| | ||| ||| |||||||||||||||||||||| | |||| Sbjct: 25527726 gcctcacaacctcctcgacgacgccggcgccgacctcctcgtcggtgaacggggctcgga 25527785 Query: 401 ggaagtcggcaagcatcttgacgtgcttgcccgcgtcggccatcatgtcgtcgtacttga 460 |||| ||||| ||| |||||||||| | | | |||||||||||||||||||||||||| Sbjct: 25527786 ggaactcggcgagcttcttgacgtggccggctgggtcggccatcatgtcgtcgtacttga 25527845 Query: 461 ggaagaggaccctgtcgggctccgccacgctctgctcccagta 503 ||||||| ||| ||||||| ||| ||| ||||| || |||||| Sbjct: 25527846 ggaagagcaccatgtcgggttcctccatgctcttcttccagta 25527888 Score = 131 bits (66), Expect = 2e-27 Identities = 264/330 (80%) Strand = Plus / Plus Query: 138 tcagaaggtgagaccagaacctctcagcttctcttcaacgatgcagtccagcttcttcgc 197 |||||||||||||||||| ||| |||||||||| ||| | | || ||||||| ||| Sbjct: 25559601 tcagaaggtgagaccagatcctttcagcttctccgcaataacggcatcaagcttctgcgc 25559660 Query: 198 catctcctcagtcaagtgtgtcttccagtctccgaccttcccagcccgaaagtaggacga 257 |||||| | |||||||| ||||||||||||| |||||| | || ||| | ||||| Sbjct: 25559661 catctcttgagtcaagttgttcttccagtctccaaccttcgccttcctaaaaaacgacga 25559720 Query: 258 attctccatgggcatcccaccaatccgatcagacacccctgaggagttgaccggcaggct 317 |||||||| || || || ||||||||| |||||| ||| |||| |||||||||| Sbjct: 25559721 gttctccatcggtcgtccgccgatccgatcaaccaccccggagaagttcaccggcaggcg 25559780 Query: 318 cttcagattctcgaagctacacatggccacgacctcctccacggccccgccgctgacctc 377 |||| ||||||||||| |||| ||| |||||| | ||| | ||| || |||||| Sbjct: 25559781 gctcagcttctcgaagctgcacagcctcacaacctccacgacgacgccggtgccgacctc 25559840 Query: 378 ctcgtcggtgaacgggacgcggaggaagtcggcaagcatcttgacgtgcttgcccgcgtc 437 |||||| |||||||||||||||||||| ||||| || |||||||||| | ||| ||| Sbjct: 25559841 ctcgtcagtgaacgggacgcggaggaactcggcgagtttcttgacgtggccggccgggtc 25559900 Query: 438 ggccatcatgtcgtcgtacttgaggaagag 467 |||||||||||||||||||||||||||||| Sbjct: 25559901 ggccatcatgtcgtcgtacttgaggaagag 25559930 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 138 tcagaaggtgagaccagaacctctcagcttctcttcaacgatgcagtccagcttcttcgc 197 |||||||||||||||||| ||| |||||||||| |||| | | |||| |||||| || Sbjct: 25527523 tcagaaggtgagaccagatcctttcagcttctcctcaataacggcatccaacttcttggc 25527582 Query: 198 catctcctcagtcaagtgtgtcttccagtctccgac 233 |||||| |||||||||| |||||||||| ||||| Sbjct: 25527583 catctcttcagtcaagtagttcttccagtccccgac 25527618 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 142 aaggtgagaccagaacctctcagcttctc 170 |||||||||||||| ||| |||||||||| Sbjct: 25557205 aaggtgagaccagatcctttcagcttctc 25557233
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 298 gaggagttgaccggcaggctcttcagattctcgaagctacacatggccacgacctcctcc 357 |||||||| ||||| |||| |||| ||||||||||| |||| ||| |||||||| Sbjct: 44058 gaggagttcaccggtaggcggctcagcttctcgaagctgcacagcctcaccacctcctcg 44117 Query: 358 acggccccgccgctgacctcctcgtcggtgaacgggacgcggaggaagtcggcaagcatc 417 ||| | ||| || |||||| |||||||||||||||||||||||||| ||||| ||| || Sbjct: 44118 acgacgccggcgtcgacctcatcgtcggtgaacgggacgcggaggaactcggcgagcttc 44177 Query: 418 ttgacgtgcttgcccgcgtcggccatcatgtcgtcgtacttgaggaagaggaccctgtcg 477 |||||||| | ||| ||||||||||||||||||||||||||||||||| || |||||| Sbjct: 44178 ttgacgtggccggccgggtcggccatcatgtcgtcgtacttgaggaagagaactctgtcg 44237 Query: 478 ggctcc 483 |||||| Sbjct: 44238 ggctcc 44243 Score = 133 bits (67), Expect = 6e-28 Identities = 184/223 (82%) Strand = Plus / Plus Query: 281 tccgatcagacacccctgaggagttgaccggcaggctcttcagattctcgaagctacaca 340 |||||||| |||||| |||||||| || || |||| |||| ||||||||||| |||| Sbjct: 14357 tccgatcaaccaccccggaggagttcacgggtaggcggctcagcttctcgaagctgcaca 14416 Query: 341 tggccacgacctcctccacggccccgccgctgacctcctcgtcggtgaacgggacgcgga 400 ||| |||||||| ||| | ||| ||| |||||||||||||||||||||| | |||| Sbjct: 14417 gcctcacaacctcctcgacgacgccggcgccgacctcctcgtcggtgaacggggctcgga 14476 Query: 401 ggaagtcggcaagcatcttgacgtgcttgcccgcgtcggccatcatgtcgtcgtacttga 460 |||| ||||| ||| |||||||||| | | | |||||||||||||||||||||||||| Sbjct: 14477 ggaactcggcgagcttcttgacgtggccggctgggtcggccatcatgtcgtcgtacttga 14536 Query: 461 ggaagaggaccctgtcgggctccgccacgctctgctcccagta 503 ||||||| ||| ||||||| ||| ||| ||||| || |||||| Sbjct: 14537 ggaagagcaccatgtcgggttcctccatgctcttcttccagta 14579 Score = 131 bits (66), Expect = 2e-27 Identities = 264/330 (80%) Strand = Plus / Plus Query: 138 tcagaaggtgagaccagaacctctcagcttctcttcaacgatgcagtccagcttcttcgc 197 |||||||||||||||||| ||| |||||||||| ||| | | || ||||||| ||| Sbjct: 46292 tcagaaggtgagaccagatcctttcagcttctccgcaataacggcatcaagcttctgcgc 46351 Query: 198 catctcctcagtcaagtgtgtcttccagtctccgaccttcccagcccgaaagtaggacga 257 |||||| | |||||||| ||||||||||||| |||||| | || ||| | ||||| Sbjct: 46352 catctcttgagtcaagttgttcttccagtctccaaccttcgccttcctaaaaaacgacga 46411 Query: 258 attctccatgggcatcccaccaatccgatcagacacccctgaggagttgaccggcaggct 317 |||||||| || || || ||||||||| |||||| ||| |||| |||||||||| Sbjct: 46412 gttctccatcggtcgtccgccgatccgatcaaccaccccggagaagttcaccggcaggcg 46471 Query: 318 cttcagattctcgaagctacacatggccacgacctcctccacggccccgccgctgacctc 377 |||| ||||||||||| |||| ||| |||||| | ||| | ||| || |||||| Sbjct: 46472 gctcagcttctcgaagctgcacagcctcacaacctccacgacgacgccggtgccgacctc 46531 Query: 378 ctcgtcggtgaacgggacgcggaggaagtcggcaagcatcttgacgtgcttgcccgcgtc 437 |||||| |||||||||||||||||||| ||||| || |||||||||| | ||| ||| Sbjct: 46532 ctcgtcagtgaacgggacgcggaggaactcggcgagtttcttgacgtggccggccgggtc 46591 Query: 438 ggccatcatgtcgtcgtacttgaggaagag 467 |||||||||||||||||||||||||||||| Sbjct: 46592 ggccatcatgtcgtcgtacttgaggaagag 46621 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 138 tcagaaggtgagaccagaacctctcagcttctcttcaacgatgcagtccagcttcttcgc 197 |||||||||||||||||| ||| |||||||||| |||| | | |||| |||||| || Sbjct: 14214 tcagaaggtgagaccagatcctttcagcttctcctcaataacggcatccaacttcttggc 14273 Query: 198 catctcctcagtcaagtgtgtcttccagtctccgac 233 |||||| |||||||||| |||||||||| ||||| Sbjct: 14274 catctcttcagtcaagtagttcttccagtccccgac 14309 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 142 aaggtgagaccagaacctctcagcttctc 170 |||||||||||||| ||| |||||||||| Sbjct: 43896 aaggtgagaccagatcctttcagcttctc 43924
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 133 bits (67), Expect = 6e-28 Identities = 184/223 (82%) Strand = Plus / Plus Query: 281 tccgatcagacacccctgaggagttgaccggcaggctcttcagattctcgaagctacaca 340 |||||||| |||||| |||||||| || || |||| |||| ||||||||||| |||| Sbjct: 158982 tccgatcaaccaccccggaggagttcacgggtaggcggctcagcttctcgaagctgcaca 159041 Query: 341 tggccacgacctcctccacggccccgccgctgacctcctcgtcggtgaacgggacgcgga 400 ||| |||||||| ||| | ||| ||| |||||||||||||||||||||| | |||| Sbjct: 159042 gcctcacaacctcctcgacgacgccggcgccgacctcctcgtcggtgaacggggctcgga 159101 Query: 401 ggaagtcggcaagcatcttgacgtgcttgcccgcgtcggccatcatgtcgtcgtacttga 460 |||| ||||| ||| |||||||||| | | | |||||||||||||||||||||||||| Sbjct: 159102 ggaactcggcgagcttcttgacgtggccggctgggtcggccatcatgtcgtcgtacttga 159161 Query: 461 ggaagaggaccctgtcgggctccgccacgctctgctcccagta 503 ||||||| ||| ||||||| ||| ||| ||||| || |||||| Sbjct: 159162 ggaagagcaccatgtcgggttcctccatgctcttcttccagta 159204 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 138 tcagaaggtgagaccagaacctctcagcttctcttcaacgatgcagtccagcttcttcgc 197 |||||||||||||||||| ||| |||||||||| |||| | | |||| |||||| || Sbjct: 158839 tcagaaggtgagaccagatcctttcagcttctcctcaataacggcatccaacttcttggc 158898 Query: 198 catctcctcagtcaagtgtgtcttccagtctccgac 233 |||||| |||||||||| |||||||||| ||||| Sbjct: 158899 catctcttcagtcaagtagttcttccagtccccgac 158934
>emb|BX831965.1|CNS0A0VN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH42ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1456 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 316 ctcttcagattctcgaagctacaca 340 ||||||||||||||||||||||||| Sbjct: 965 ctcttcagattctcgaagctacaca 941
>ref|NM_120783.3| Arabidopsis thaliana sulfotransferase AT5G07010 mRNA, complete cds Length = 1429 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 |||||||||||||||||||||||| Sbjct: 971 tcttcagattctcgaagctacaca 948
>gb|BT008847.1| Arabidopsis thaliana At5g07010 mRNA, complete cds Length = 1080 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 |||||||||||||||||||||||| Sbjct: 904 tcttcagattctcgaagctacaca 881
>gb|AY099809.1| Arabidopsis thaliana steroid sulfotransferase-like protein (At5g07010) mRNA, complete cds Length = 1347 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 |||||||||||||||||||||||| Sbjct: 969 tcttcagattctcgaagctacaca 946
>gb|AY054219.1| Arabidopsis thaliana AT5g07010/MOJ9_18 mRNA, complete cds Length = 1270 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 |||||||||||||||||||||||| Sbjct: 971 tcttcagattctcgaagctacaca 948
>emb|BX832510.1|CNS0A0WE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1396 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 |||||||||||||||||||||||| Sbjct: 940 tcttcagattctcgaagctacaca 917
>emb|BX831973.1|CNS0A0ZK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZB05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1201 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 |||||||||||||||||||||||| Sbjct: 942 tcttcagattctcgaagctacaca 919
>gb|AY084999.1| Arabidopsis thaliana clone 124067 mRNA, complete sequence Length = 1273 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 |||||||||||||||||||||||| Sbjct: 969 tcttcagattctcgaagctacaca 946
>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9 Length = 86380 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 317 tcttcagattctcgaagctacaca 340 |||||||||||||||||||||||| Sbjct: 54112 tcttcagattctcgaagctacaca 54135 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 tcttcagattctcgaagctacaca 340 ||||||||||||| |||||||||| Sbjct: 50803 tcttcagattctcaaagctacaca 50826
>gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, complete sequence Length = 172282 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 agcaacaacttattcatacat 24 ||||||||||||||||||||| Sbjct: 55349 agcaacaacttattcatacat 55329
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 acctcctccacggccccgccg 369 ||||||||||||||||||||| Sbjct: 174747 acctcctccacggccccgccg 174727
>gb|AC162381.7| Mus musculus 10 BAC RP24-528B14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 150712 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 aaattaaagagatgtgcaaccacac 136 |||||||||| |||||||||||||| Sbjct: 147471 aaattaaagacatgtgcaaccacac 147447
>ref|NM_169202.1| Drosophila melanogaster doublesex CG11094-RA, transcript variant A (dsx), mRNA Length = 4010 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 atggccacgacctcctccacg 360 ||||||||||||||||||||| Sbjct: 2758 atggccacgacctcctccacg 2778
>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone BACR11D12, complete sequence Length = 189596 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 atggccacgacctcctccacg 360 ||||||||||||||||||||| Sbjct: 150479 atggccacgacctcctccacg 150459
>gb|AC156392.5| Mus musculus 10 BAC RP24-320E8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188305 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 aaattaaagagatgtgcaaccacac 136 |||||||||| |||||||||||||| Sbjct: 11935 aaattaaagacatgtgcaaccacac 11911
>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete sequence Length = 267607 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 atggccacgacctcctccacg 360 ||||||||||||||||||||| Sbjct: 227018 atggccacgacctcctccacg 226998
>gb|M25294.1|M25294 Drosophila melanogaster dsx mRNA, partial cds Length = 1554 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 atggccacgacctcctccacg 360 ||||||||||||||||||||| Sbjct: 303 atggccacgacctcctccacg 323
>ref|NM_120782.3| Arabidopsis thaliana sulfotransferase AT5G07000 mRNA, complete cds Length = 1537 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 ||||||||||||| |||||||||| Sbjct: 1113 tcttcagattctcaaagctacaca 1090
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aattaaagagatgtgcaaccacac 136 ||||||||||||||| |||||||| Sbjct: 286991 aattaaagagatgtgaaaccacac 287014
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 acgatgcagtccagcttctt 194 |||||||||||||||||||| Sbjct: 243458 acgatgcagtccagcttctt 243477
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cgccgctgacctcctcgtcg 384 |||||||||||||||||||| Sbjct: 168088 cgccgctgacctcctcgtcg 168107
>gb|DQ249341.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 geldanamycin biosynthesis gene cluster, partial sequence Length = 75920 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 cgctgacctcctcgtcggtgaacg 391 ||||||||||| |||||||||||| Sbjct: 39227 cgctgacctccacgtcggtgaacg 39250
>ref|XM_842923.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0318) partial mRNA Length = 1440 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 acgatgcagtccagcttctt 194 |||||||||||||||||||| Sbjct: 1282 acgatgcagtccagcttctt 1301
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ccatcatgtcgtcgtacttg 459 |||||||||||||||||||| Sbjct: 955499 ccatcatgtcgtcgtacttg 955480
>gb|BT009507.1| Triticum aestivum clone wr1.pk0089.e5:fis, full insert mRNA sequence Length = 634 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 354 ctccacggccccgccgctgacctcctcgtcggtgaacgggacgcggaggaag 405 ||||||| | |||||||| ||||||| |||||||||||||| ||||||| Sbjct: 294 ctccacgactccgccgctttcctcctcacgggtgaacgggacgccgaggaag 243
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 177 gatgcagtccagcttcttcgccatctcc 204 ||||||| || ||||||||||||||||| Sbjct: 3053544 gatgcagacctgcttcttcgccatctcc 3053517
>gb|AY640314.1| Eucalyptus grandis LEAFY/FLORICAULA (LFY1) mRNA, complete cds Length = 1260 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gacctcctcgtcggtgaacg 391 |||||||||||||||||||| Sbjct: 283 gacctcctcgtcggtgaacg 302
>gb|AY640313.1| Eucalyptus grandis LEAFY/FLORICAULA (LFY1) gene, complete cds Length = 1615 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gacctcctcgtcggtgaacg 391 |||||||||||||||||||| Sbjct: 370 gacctcctcgtcggtgaacg 389
>gb|AC146662.3| Callithrix jacchus clone CH259-329B2, complete sequence Length = 136587 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 aattaaagagatgtgcaaccacac 136 ||||||||||||||| |||||||| Sbjct: 75688 aattaaagagatgtgaaaccacac 75711
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agcttcttcgccatctcctc 206 |||||||||||||||||||| Sbjct: 3164477 agcttcttcgccatctcctc 3164496
>gb|BT006241.1| Arabidopsis thaliana At5g07000 mRNA, complete cds Length = 1044 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 ||||||||||||| |||||||||| Sbjct: 868 tcttcagattctcaaagctacaca 845
>ref|NM_064701.1| Caenorhabditis elegans Y53F4B.17 (Y53F4B.17) mRNA, complete cds Length = 1023 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ccacgacctcctccacggcc 363 |||||||||||||||||||| Sbjct: 253 ccacgacctcctccacggcc 234
>ref|NM_074077.2| Caenorhabditis elegans F58E10.3 (F58E10.3) mRNA, complete cds Length = 2413 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ccacgacctcctccacggcc 363 |||||||||||||||||||| Sbjct: 602 ccacgacctcctccacggcc 583
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 gccacgacctcctccacggccccgccgc 370 ||||||||||||||| |||| ||||||| Sbjct: 35374318 gccacgacctcctcctcggcaccgccgc 35374291
>emb|BX829897.1|CNS0A186 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB44ZG02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1517 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 ||||||||||||| |||||||||| Sbjct: 1113 tcttcagattctcaaagctacaca 1090
>emb|BX829446.1|CNS0A1K2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1320 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 ||||||||||||| |||||||||| Sbjct: 917 tcttcagattctcaaagctacaca 894
>emb|BX831024.1|CNS09YST Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZA11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1302 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 ||||||||||||| |||||||||| Sbjct: 900 tcttcagattctcaaagctacaca 877
>gb|AY826858.1| Isochrysis galbana clone ISMD1 malate dehydrogenase mRNA, partial cds Length = 1114 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gtcgggctccgccacgctct 493 |||||||||||||||||||| Sbjct: 677 gtcgggctccgccacgctct 696
>gb|AY179507.1| Streptomyces hygroscopicus strain NRRL 3602 geldanamycin biosynthesis gene cluster, partial sequence Length = 69644 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 cgctgacctcctcgtcggtgaacg 391 ||||||||||| |||||||||||| Sbjct: 31446 cgctgacctccacgtcggtgaacg 31469
>gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, complete sequence Length = 181971 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gccatctcctcagtcaagtg 215 |||||||||||||||||||| Sbjct: 19881 gccatctcctcagtcaagtg 19900
>dbj|AK117202.1| Arabidopsis thaliana At5g07000 mRNA for putative steroid sulfotransferase, complete cds, clone: RAFL16-75-F02 Length = 1236 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 tcttcagattctcgaagctacaca 340 ||||||||||||| |||||||||| Sbjct: 933 tcttcagattctcaaagctacaca 910
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 gccacgacctcctccacggccccgccgc 370 ||||||||||||||| |||| ||||||| Sbjct: 6142 gccacgacctcctcctcggcaccgccgc 6115
>emb|Z81555.1|CEF58E10 Caenorhabditis elegans Cosmid F58E10, complete sequence Length = 32243 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ccacgacctcctccacggcc 363 |||||||||||||||||||| Sbjct: 27038 ccacgacctcctccacggcc 27057
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ttcttcgccatctcctcagt 209 |||||||||||||||||||| Sbjct: 1670182 ttcttcgccatctcctcagt 1670201
>emb|AL132949.2|CEY53F4B Caenorhabditis elegans YAC Y53F4B, complete sequence Length = 227606 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ccacgacctcctccacggcc 363 |||||||||||||||||||| Sbjct: 107397 ccacgacctcctccacggcc 107378
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 gccacgacctcctccacggccccgccgc 370 ||||||||||||||| |||| ||||||| Sbjct: 170162 gccacgacctcctcctcggcaccgccgc 170135 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,645,270 Number of Sequences: 3902068 Number of extensions: 3645270 Number of successful extensions: 59794 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59509 Number of HSP's gapped (non-prelim): 277 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
