>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence
          Length = 245594

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 69     acatgatagataaaaatcaat 89
              |||||||||||||||||||||
Sbjct: 206096 acatgatagataaaaatcaat 206116

>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3,
             complete sequence
          Length = 114380

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   cacagaagcaaagagtacacc 144
             |||||||||||||||||||||
Sbjct: 98409 cacagaagcaaagagtacacc 98389

>gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome 5, complete sequence
          Length = 203321

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 69     acatgatagataaaaatcaat 89
              |||||||||||||||||||||
Sbjct: 140852 acatgatagataaaaatcaat 140872

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 313     catccgccgctgggggagcatcgcc 337
               |||||||||||| ||||||||||||
Sbjct: 1864859 catccgccgctgcgggagcatcgcc 1864883

>gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complete sequence
          Length = 157928

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 327    ggagcatcgcccctgtcctcctgc 350
              |||||||| |||||||||||||||
Sbjct: 102624 ggagcatctcccctgtcctcctgc 102601

>emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chromosome Xq24-26.2,
              complete sequence
          Length = 144177

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     atagataaaaatcaatctgt 93
              ||||||||||||||||||||
Sbjct: 111260 atagataaaaatcaatctgt 111241

>emb|AL034412.2|HS99M1 Human DNA sequence from clone RP6-99M1 on chromosome Xp11.1-11.4
             Contains a novel pseudogene (GL004), complete sequence
          Length = 107049

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tttatgataaaacgttaata 29
             ||||||||||||||||||||
Sbjct: 27442 tttatgataaaacgttaata 27423

>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete
             sequence
          Length = 209583

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 327   ggagcatcgcccctgtcctcctgc 350
             |||||||| |||||||||||||||
Sbjct: 18386 ggagcatctcccctgtcctcctgc 18363

>gb|AC109489.3| Homo sapiens chromosome 5 clone RP11-63G23, complete sequence
          Length = 148131

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ttttggaaactctgaatggg 201
             ||||||||||||||||||||
Sbjct: 28548 ttttggaaactctgaatggg 28567

>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence
          Length = 190848

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ttttggaaactctgaatggg 201
              ||||||||||||||||||||
Sbjct: 178657 ttttggaaactctgaatggg 178676

>dbj|AK163164.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730058C04 product:alpha
           thalassemia/mental retardation syndrome X-linked homolog
           (human), full insert sequence
          Length = 5433

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 gcacagaagcaaagagtaca 142
           ||||||||||||||||||||
Sbjct: 532 gcacagaagcaaagagtaca 513

>gb|AC008502.8| Homo sapiens chromosome 5 clone CTC-442G11, complete sequence
          Length = 123495

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aatgatggcaacctttctaa 165
             ||||||||||||||||||||
Sbjct: 29723 aatgatggcaacctttctaa 29704

>emb|CR352769.1| Gallus gallus finished cDNA, clone ChEST436e2
          Length = 928

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 gctgggggagcatcgcccct 340
           ||||||||||||||||||||
Sbjct: 911 gctgggggagcatcgcccct 892

>emb|CT009511.9| M.truncatula DNA sequence from clone MTH2-69I7 on chromosome 3,
             complete sequence
          Length = 116999

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ttttatgataaaacgttaat 28
             ||||||||||||||||||||
Sbjct: 86050 ttttatgataaaacgttaat 86031

>gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complete sequence
          Length = 237935

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 327    ggagcatcgcccctgtcctcctgc 350
              |||||||| |||||||||||||||
Sbjct: 196773 ggagcatctcccctgtcctcctgc 196750

>emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chromosome X, complete
             sequence
          Length = 181805

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   gcacagaagcaaagagtaca 142
             ||||||||||||||||||||
Sbjct: 41141 gcacagaagcaaagagtaca 41160

>emb|Z74022.1|HSU90B3 Human DNA sequence from clone LL0XNC01-90B3 on chromosome Xp11,
             complete sequence
          Length = 35609

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tttatgataaaacgttaata 29
             ||||||||||||||||||||
Sbjct: 31976 tttatgataaaacgttaata 31995


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,897,691
Number of Sequences: 3902068
Number of extensions: 2897691
Number of successful extensions: 53686
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53649
Number of HSP's gapped (non-prelim): 37
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)