ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart29g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OCTB1_DROME (Q9VCZ3) Octopamine receptor beta-1 (DmOct-beta-1R) ... 28 7.6
2KNS1_YEAST (P32350) Dual specificity protein kinase KNS1 (EC 2.7... 28 7.6

>OCTB1_DROME (Q9VCZ3) Octopamine receptor beta-1 (DmOct-beta-1R) (DmOA2)|
          Length = 508

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = -1

Query: 320 LGMKDLTQGLCYSELGVKELAHGSWVEGCVICRQYSVRRRLSRFNFYYST----ELC*ME 153
           L + D+   LC        +  G W+ G V+C  +      + F+ Y+ST     LC + 
Sbjct: 149 LAVADMLVALCAMTFNASVMISGKWMFGSVMCDMW------NSFDVYFSTASIMHLCCIS 202

Query: 152 ID 147
           +D
Sbjct: 203 VD 204



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>KNS1_YEAST (P32350) Dual specificity protein kinase KNS1 (EC 2.7.12.1)|
          Length = 737

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
 Frame = +2

Query: 272 PPVLSS-------INLGSSPSFPVRSNCWCCCGCWSAALVPSQ*VQVQELHPIHRLQELE 430
           PPV+S+       I LG   SFP        C  WS A V  + V  + L+PIH  + LE
Sbjct: 502 PPVISTRHYRAPEIVLGLGWSFP--------CDIWSIACVLVELVIGESLYPIH--ENLE 551

Query: 431 H 433
           H
Sbjct: 552 H 552


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,586,813
Number of Sequences: 219361
Number of extensions: 1116881
Number of successful extensions: 2600
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2599
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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