Clone Name | rbart29f10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC087863.10| Homo sapiens 12q BAC RP11-357K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179876 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 355 caagtgaaagaagaaaacaataa 377 ||||||||||||||||||||||| Sbjct: 80896 caagtgaaagaagaaaacaataa 80918
>ref|XM_693702.1| PREDICTED: Danio rerio similar to C-type natriuretic peptide-4 (LOC570244), mRNA Length = 2682 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 361 aaagaagaaaacaataacttatc 383 ||||||||||||||||||||||| Sbjct: 418 aaagaagaaaacaataacttatc 440
>dbj|BS000180.1| Pan troglodytes chromosome 22 clone:RP43-184I13, map 22, complete sequences Length = 158703 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ttcaagtgaaagaagaaaacaa 374 |||||||||||||||||||||| Sbjct: 66202 ttcaagtgaaagaagaaaacaa 66181
>dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, section 52/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ttcaagtgaaagaagaaaacaa 374 |||||||||||||||||||||| Sbjct: 268429 ttcaagtgaaagaagaaaacaa 268408
>gb|L15351.1|HAMSHCA Mesocricetus auratus alpha-cardiac myosin heavy chain gene exons 1-39, complete cds Length = 32415 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 ctccaaagttacacagagaaac 124 |||||||||||||||||||||| Sbjct: 27457 ctccaaagttacacagagaaac 27478
>dbj|AP001069.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B382J1, SOD-AML region, complete sequence Length = 105567 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 ttcaagtgaaagaagaaaacaa 374 |||||||||||||||||||||| Sbjct: 60374 ttcaagtgaaagaagaaaacaa 60353
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gaaaagatctatcttgtgtcc 285 ||||||||||||||||||||| Sbjct: 1495441 gaaaagatctatcttgtgtcc 1495461
>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence Length = 239688 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 agtgaaagaagaaaacaataa 377 ||||||||||||||||||||| Sbjct: 132048 agtgaaagaagaaaacaataa 132028
>gb|BC043943.1| Mus musculus mitogen-activated protein kinase kinase kinase 15, mRNA (cDNA clone IMAGE:4975522), containing frame-shift errors Length = 3862 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 aagcacatgaagtaacacggatgtc 344 ||||||||||||| ||||||||||| Sbjct: 242 aagcacatgaagtcacacggatgtc 218
>gb|BC031147.1| Mus musculus mitogen-activated protein kinase kinase kinase 15, mRNA (cDNA clone IMAGE:4975522), containing frame-shift errors Length = 3862 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 aagcacatgaagtaacacggatgtc 344 ||||||||||||| ||||||||||| Sbjct: 242 aagcacatgaagtcacacggatgtc 218
>ref|XM_984997.1| PREDICTED: Mus musculus mitogen-activated protein kinase kinase kinase 15 (Map3k15), mRNA Length = 4661 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 aagcacatgaagtaacacggatgtc 344 ||||||||||||| ||||||||||| Sbjct: 664 aagcacatgaagtcacacggatgtc 640
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gttcgaaatgcaaataccttatatg 263 ||||||||||||||||||| ||||| Sbjct: 35693403 gttcgaaatgcaaatacctcatatg 35693427
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence Length = 541399 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 atgaattgtgaaaataaagaa 165 ||||||||||||||||||||| Sbjct: 301298 atgaattgtgaaaataaagaa 301278
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gttcgaaatgcaaataccttatatg 263 ||||||||||||||||||| ||||| Sbjct: 54017 gttcgaaatgcaaatacctcatatg 54041
>gb|DQ273262.1| Lycopersicon hirsutum endogenous virus LycEPRV_Lh8, complete sequence Length = 8670 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 aattgtgaaaataaagaagtg 168 ||||||||||||||||||||| Sbjct: 7027 aattgtgaaaataaagaagtg 7007
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 gaaaagatctatcttgtgtcc 285 ||||||||||||||||||||| Sbjct: 1490811 gaaaagatctatcttgtgtcc 1490831
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 119003 ccaaagttacacagagaaac 119022
>gb|AC110512.13| Mus musculus chromosome 15, clone RP24-134E9, complete sequence Length = 163319 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 71618 ccaaagttacacagagaaac 71599
>gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, complete sequence Length = 218246 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 108097 ccaaagttacacagagaaac 108116
>gb|AC147595.10| Mus musculus strain RIII clone mgsriii-p1_7 map 6, complete sequence Length = 90946 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 88073 ccaaagttacacagagaaac 88054
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 gagcagtacaaaggcaacat 41 |||||||||||||||||||| Sbjct: 1687164 gagcagtacaaaggcaacat 1687183
>gb|AC119406.6| Trypanosoma brucei chromosome 8 clone RPCI93-28L1, complete sequence Length = 134874 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 acaaactgcatctagtaactgaag 194 |||||||||||| ||||||||||| Sbjct: 83792 acaaactgcatcaagtaactgaag 83769
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 acaaactgcatctagtaactgaag 194 |||||||||||| ||||||||||| Sbjct: 1010799 acaaactgcatcaagtaactgaag 1010776
>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219634 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 15227 ccaaagttacacagagaaac 15208
>gb|AC110896.8| Mus musculus chromosome 3, clone RP24-127P11, complete sequence Length = 151699 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tacacagagaaacaatatct 131 |||||||||||||||||||| Sbjct: 62071 tacacagagaaacaatatct 62090
>ref|XM_457720.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C01023g) partial mRNA Length = 2178 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 aaatgcaaataccttatatg 263 |||||||||||||||||||| Sbjct: 1601 aaatgcaaataccttatatg 1582
>gb|AC147381.3| Pan troglodytes BAC clone RP43-162H15 from 7, complete sequence Length = 162222 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 taatacatttcaagtgaaag 364 |||||||||||||||||||| Sbjct: 146573 taatacatttcaagtgaaag 146554
>gb|AC132385.5| Mus musculus BAC clone RP23-438F21 from chromosome 18, complete sequence Length = 184478 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 20489 ccaaagttacacagagaaac 20470
>gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, partial sequence Length = 140590 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gtgaaagaagaaaacaataactta 381 |||| ||||||||||||||||||| Sbjct: 43383 gtgatagaagaaaacaataactta 43360
>gb|AC166349.4| Mus musculus BAC clone RP24-192I21 from chromosome 12, complete sequence Length = 168529 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 82100 ccaaagttacacagagaaac 82119
>gb|AC165966.3| Mus musculus BAC clone RP23-259L2 from chromosome 17, complete sequence Length = 194944 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 84397 ccaaagttacacagagaaac 84416
>ref|XM_820665.1| Trypanosoma brucei TREU927 clone RPCI93-28L1 electron transfer protein (Tb927.8.3380) partial mRNA Length = 729 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 acaaactgcatctagtaactgaag 194 |||||||||||| ||||||||||| Sbjct: 591 acaaactgcatcaagtaactgaag 568
>emb|X96549.1|CAMAR7981 C.aureus matrix attachment region (7981bp) Length = 7891 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 1976 ccaaagttacacagagaaac 1995
>gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome 18, complete sequence Length = 173614 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 15557 ccaaagttacacagagaaac 15576
>emb|AL928544.5| Mouse DNA sequence from clone RP23-358C5 on chromosome 2, complete sequence Length = 126329 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 4443 ccaaagttacacagagaaac 4424
>gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, complete sequence Length = 239297 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 86747 ccaaagttacacagagaaac 86766
>emb|AL451124.13| Human DNA sequence from clone RP11-20P5 on chromosome 9 Contains the 3' end of a variant of a novel gene (FLJ31810) and a novel pseudogene (FLJ37424), complete sequence Length = 164291 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 tgaaaataaagaagtggtac 172 |||||||||||||||||||| Sbjct: 134123 tgaaaataaagaagtggtac 134142
>emb|AL389885.12| Human DNA sequence from clone RP11-391J2 on chromosome 10 Contains a histone deacetylase 1 (HD1, RPD3, RPD3L1) (HDAC1) pseudogene, part of the PLCE1 gene for phospholipase C, epsilon 1 (PLCE, KIAA1516) and a novel gene, complete sequence Length = 101767 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 tctaatacatttcaagtgaaagaa 366 ||||| |||||||||||||||||| Sbjct: 42211 tctaaaacatttcaagtgaaagaa 42188
>emb|AL136365.9| Human DNA sequence from clone RP11-143M15 on chromosome 9p23-24.3 Contains the DMRT1 gene for doublesex and mab-3 related transcription factor 1, the DMRT3 gene for doublesex and mab-3 related transcription factor 3 and four CpG islands, complete sequence Length = 179006 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 caagtgaaagaagaaaacaa 374 |||||||||||||||||||| Sbjct: 157436 caagtgaaagaagaaaacaa 157417
>gb|AC158777.3| Mus musculus chromosome 15, clone RP24-354I13, complete sequence Length = 175668 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 aatgcaaataccttatatga 264 |||||||||||||||||||| Sbjct: 62077 aatgcaaataccttatatga 62058
>emb|X79282.1|CAGI3 C.aureus Gi3-alpha gene Length = 4767 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 401 ccaaagttacacagagaaac 420
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 aaatgcaaataccttatatg 263 |||||||||||||||||||| Sbjct: 96104 aaatgcaaataccttatatg 96123
>gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, complete sequence Length = 166125 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 aataccttatatgagaaaag 270 |||||||||||||||||||| Sbjct: 38258 aataccttatatgagaaaag 38277
>gb|AC005250.1| Homo sapiens BAC clone CTA-318M5 from 7, complete sequence Length = 94336 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 taatacatttcaagtgaaag 364 |||||||||||||||||||| Sbjct: 81758 taatacatttcaagtgaaag 81777
>gb|AC159243.2| Mus musculus BAC clone RP24-274F15 from chromosome 12, complete sequence Length = 163575 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 153907 ccaaagttacacagagaaac 153926
>gb|AC150894.4| Mus musculus BAC clone RP24-409D4 from chromosome 3, complete sequence Length = 194074 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 79524 ccaaagttacacagagaaac 79543
>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence Length = 165962 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gtgaaagaagaaaacaataa 377 |||||||||||||||||||| Sbjct: 60522 gtgaaagaagaaaacaataa 60503
>dbj|AK047469.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930067P14 product:hypothetical protein, full insert sequence Length = 4033 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 74 ccaaagttacacagagaaac 55
>gb|AC157774.5| Mus musculus chromosome 8, clone RP23-423E20, complete sequence Length = 198967 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 tacacagagaaacaatatctaaag 135 |||||||||||||||||| ||||| Sbjct: 34821 tacacagagaaacaatatttaaag 34798
>emb|BX000463.19| Zebrafish DNA sequence from clone CH211-266I2, complete sequence Length = 164682 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 caaaggcaacatacaggact 49 |||||||||||||||||||| Sbjct: 114591 caaaggcaacatacaggact 114610
>gb|AF020802.2|AF020802 Homo sapiens chromosome 21 clone cosmids Q98A3 and c103C0352 map 21q22.2, complete sequence Length = 61946 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 atacaggacttctctatagt 59 |||||||||||||||||||| Sbjct: 36362 atacaggacttctctatagt 36343
>emb|BX901941.5| Mouse DNA sequence from clone RP23-344H22 on chromosome X, complete sequence Length = 138091 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 46548 ccaaagttacacagagaaac 46529
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 gtgaaaataaagaagtggtacaaa 175 ||||||||||| |||||||||||| Sbjct: 3992449 gtgaaaataaacaagtggtacaaa 3992426
>gb|AC090885.1|AC090885 Homo sapiens chromosome 3 clone RP11-270I6 map 3p, complete sequence Length = 193264 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aagcacatgaagtaacacgg 339 |||||||||||||||||||| Sbjct: 171410 aagcacatgaagtaacacgg 171391
>gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D14 map 3p, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aagcacatgaagtaacacgg 339 |||||||||||||||||||| Sbjct: 5700 aagcacatgaagtaacacgg 5681
>emb|AL772181.23| Mouse DNA sequence from clone RP23-118H3 on chromosome 2, complete sequence Length = 219704 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 197390 ccaaagttacacagagaaac 197409
>gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, complete sequence Length = 192176 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 183737 ccaaagttacacagagaaac 183718
>dbj|AP001724.1| Homo sapiens genomic DNA, chromosome 21q, section 68/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 atacaggacttctctatagt 59 |||||||||||||||||||| Sbjct: 157700 atacaggacttctctatagt 157681
>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence Length = 182171 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aagcacatgaagtaacacgg 339 |||||||||||||||||||| Sbjct: 81401 aagcacatgaagtaacacgg 81420
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 gtgaaaataaagaagtggtacaaa 175 ||||||||||| |||||||||||| Sbjct: 123961 gtgaaaataaacaagtggtacaaa 123938
>gb|AC150431.2| Branchiostoma floridae clone CH302-9B19, complete sequence Length = 172975 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 attgtgaaaataaagaagtg 168 |||||||||||||||||||| Sbjct: 6993 attgtgaaaataaagaagtg 7012
>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete sequence Length = 195733 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 158622 ccaaagttacacagagaaac 158603
>emb|AL808134.17| Mouse DNA sequence from clone RP23-135E1 on chromosome X, complete sequence Length = 195763 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 104224 ccaaagttacacagagaaac 104205
>ref|XM_311708.2| Anopheles gambiae str. PEST ENSANGP00000013637 (ENSANGG00000011148), partial mRNA Length = 1560 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 acaggcgacaacatactgtc 411 |||||||||||||||||||| Sbjct: 556 acaggcgacaacatactgtc 575
>gb|AC109185.15| Mus musculus chromosome 15, clone RP24-543J20, complete sequence Length = 179776 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 aatgcaaataccttatatga 264 |||||||||||||||||||| Sbjct: 80867 aatgcaaataccttatatga 80848
>emb|AJ229041.1|HS229041 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22; segment 1/3 Length = 323000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 atacaggacttctctatagt 59 |||||||||||||||||||| Sbjct: 25585 atacaggacttctctatagt 25604
>gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, complete sequence Length = 205102 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 30793 ccaaagttacacagagaaac 30774
>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence Length = 197913 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 105089 ccaaagttacacagagaaac 105108
>emb|BX571842.14| Zebrafish DNA sequence from clone CH211-191A24 in linkage group 20, complete sequence Length = 168790 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 aattgtgaaaataaagaagt 167 |||||||||||||||||||| Sbjct: 92969 aattgtgaaaataaagaagt 92988
>emb|X05584.1|CLWNJ551 Chinese hamster W gene region novel junction NJ551,562 Length = 1931 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 1864 ccaaagttacacagagaaac 1883
>emb|X05583.1|CLWHOT Chinese hamster DNA of wild-type W gene intron with hotspot seq. for rearrangements Length = 2046 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 1979 ccaaagttacacagagaaac 1998
>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete sequence Length = 193277 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 125936 ccaaagttacacagagaaac 125917
>emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chromosome 4, complete sequence Length = 230886 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 8329 ccaaagttacacagagaaac 8310
>dbj|AK114508.1| Ciona intestinalis cDNA, clone:cieg004l21, full insert sequence Length = 1612 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tccaaagttacacagagaaa 123 |||||||||||||||||||| Sbjct: 1324 tccaaagttacacagagaaa 1343
>gb|AC117799.9| Mus musculus chromosome 5, clone RP24-556H22, complete sequence Length = 178949 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 112276 ccaaagttacacagagaaac 112295
>emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chromosome 4, complete sequence Length = 206709 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tacacagagaaacaatatct 131 |||||||||||||||||||| Sbjct: 24405 tacacagagaaacaatatct 24424
>emb|AL935168.11| Mouse DNA sequence from clone RP23-337M17 on chromosome 2, complete sequence Length = 181602 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tacacagagaaacaatatct 131 |||||||||||||||||||| Sbjct: 8089 tacacagagaaacaatatct 8108
>gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete sequence Length = 197316 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 7133 ccaaagttacacagagaaac 7152
>gb|AC151575.1| Mus musculus BAC clone RP24-126E1 from 19, complete sequence Length = 200563 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 159150 ccaaagttacacagagaaac 159131
>gb|AC132952.3| Mus musculus BAC clone RP24-175H8 from 19, complete sequence Length = 177345 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 115505 ccaaagttacacagagaaac 115524
>emb|AL607070.19| Mouse DNA sequence from clone RP23-31C9 on chromosome 4, complete sequence Length = 215106 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 47000 ccaaagttacacagagaaac 47019
>emb|AL845316.3| Mouse DNA sequence from clone RP23-348I7 on chromosome X, complete sequence Length = 197688 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 141530 ccaaagttacacagagaaac 141511
>emb|AL844577.3| Mouse DNA sequence from clone RP23-129P1 on chromosome 2, complete sequence Length = 204516 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 33857 ccaaagttacacagagaaac 33876
>emb|AL669981.11| Mouse DNA sequence from clone RP23-335B9 on chromosome 4, complete sequence Length = 222981 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 58043 ccaaagttacacagagaaac 58062
>emb|AL513356.8| Mouse DNA sequence from clone RP23-193O17 on chromosome X, complete sequence Length = 216238 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ccaaagttacacagagaaac 124 |||||||||||||||||||| Sbjct: 5448 ccaaagttacacagagaaac 5467
>gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p, complete sequence Length = 175121 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aagcacatgaagtaacacgg 339 |||||||||||||||||||| Sbjct: 27308 aagcacatgaagtaacacgg 27327
>dbj|AB063085.1| Macaca fascicularis brain cDNA clone:QtrA-14876, full insert sequence Length = 2418 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 caccaagagatgaattgtga 155 |||||||||||||||||||| Sbjct: 2266 caccaagagatgaattgtga 2285
>dbj|AP000687.2| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB29E1, CBR1-HLCS region Length = 97982 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 atacaggacttctctatagt 59 |||||||||||||||||||| Sbjct: 26815 atacaggacttctctatagt 26796
>emb|AL606473.6| Mouse DNA sequence from clone RP23-327A19 on chromosome 2, complete sequence Length = 33358 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 tacacagagaaacaatatct 131 |||||||||||||||||||| Sbjct: 5651 tacacagagaaacaatatct 5670 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,694,760 Number of Sequences: 3902068 Number of extensions: 4694760 Number of successful extensions: 98129 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97876 Number of HSP's gapped (non-prelim): 253 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)