Clone Information

BLAST Search Result

Clone Name	rbart29f03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MTNA_THEMA (Q9X013) Probable methylthioribose-1-phosphate isomer...	75	7e-14
2	MTNA_SYNY3 (P74497) Probable methylthioribose-1-phosphate isomer...	75	1e-13
3	EI2B1_PYRFU (Q8U178) Putative translation initiation factor eIF-...	70	3e-12
4	MTNA_PSESM (Q885T7) Probable methylthioribose-1-phosphate isomer...	70	4e-12
5	MTNA_PSEAE (Q9HZ65) Probable methylthioribose-1-phosphate isomer...	70	4e-12
6	MTNA_XYLFA (Q9PAG5) Probable methylthioribose-1-phosphate isomer...	69	5e-12
7	MTNA_XYLFT (Q87A92) Probable methylthioribose-1-phosphate isomer...	69	7e-12
8	EI2B1_PYRAB (Q9UZ16) Putative translation initiation factor eIF-...	69	9e-12
9	EI2B1_PYRHO (O58433) Putative translation initiation factor eIF-...	68	2e-11
10	MTNA_PSEPK (Q88M09) Probable methylthioribose-1-phosphate isomer...	67	2e-11
11	YP18_YEAST (Q06489) Hypothetical 45.0 kDa protein in PIS1-CLB2 i...	67	3e-11
12	MTNA_BACSU (O31662) Methylthioribose-1-phosphate isomerase (EC 5...	66	4e-11
13	EI2B_AQUAE (O67879) Putative translation initiation factor eIF-2...	64	3e-10
14	MTNA_LEPIN (Q8F2A8) Probable methylthioribose-1-phosphate isomer...	61	2e-09
15	MTNA_LEPIC (Q72T46) Probable methylthioribose-1-phosphate isomer...	61	2e-09
16	YQJQ_CAEEL (Q93169) Hypothetical protein C01G10.9 in chromosome V	61	2e-09
17	EI2B1_METJA (Q57896) Putative translation initiation factor eIF-...	60	3e-09
18	EI2B1_AERPE (Q9YE84) Putative translation initiation factor eIF-...	55	1e-07
19	EI2B1_ARCFU (O29877) Putative translation initiation factor eIF-...	54	2e-07
20	EI2B1_METTH (O27900) Putative translation initiation factor eIF-...	52	7e-07
21	EI2B2_PYRAB (Q9V281) Putative translation initiation factor eIF-...	49	7e-06
22	EI2B2_METJA (Q57586) Putative translation initiation factor eIF-...	49	1e-05
23	EI2B2_PYRHO (O57947) Putative translation initiation factor eIF-...	48	2e-05
24	EI2B2_ARCFU (O28242) Putative translation initiation factor eIF-...	45	1e-04
25	EI2B2_PYRFU (Q8U4G6) Putative translation initiation factor eIF-...	44	2e-04
26	WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A	32	0.92
27	YR073_MIMIV (Q5UPF0) Hypothetical protein R73	31	1.6
28	GYS_NEUCR (O93869) Glycogen [starch] synthase (EC 2.4.1.11)	31	1.6
29	EI2BL_PYRAB (Q9UYB6) Putative translation initiation factor eIF-...	30	2.7
30	TLR4_PAPAN (Q9TSP2) Toll-like receptor 4 precursor (CD284 antigen)	30	2.7
31	EI2BD_RAT (Q63186) Translation initiation factor eIF-2B delta su...	30	3.5
32	TLR4_PANPA (Q9TTN0) Toll-like receptor 4 precursor (CD284 antigen)	30	4.6
33	TLR4_HUMAN (O00206) Toll-like receptor 4 precursor (hToll) (CD28...	30	4.6
34	TLR4_PONPY (Q8SPE9) Toll-like receptor 4 precursor (CD284 antigen)	30	4.6
35	TLR4_GORGO (Q8SPE8) Toll-like receptor 4 precursor (CD284 antigen)	30	4.6
36	EI2BL_PYRHO (O58185) Putative translation initiation factor eIF-...	30	4.6
37	FHL5_MOUSE (Q9WTX7) Four and a half LIM domains protein 5 (FHL-5...	30	4.6
38	EI2BB_RAT (Q62818) Translation initiation factor eIF-2B beta sub...	29	6.0
39	EI2BB_MOUSE (Q99LD9) Translation initiation factor eIF-2B beta s...	29	6.0
40	Y1804_BACCR (Q81F03) UPF0176 protein BC_1804	29	7.8
41	EI2BD_HUMAN (Q9UI10) Translation initiation factor eIF-2B delta ...	29	7.8
42	EI2BD_MOUSE (Q61749) Translation initiation factor eIF-2B delta ...	29	7.8
43	EI2BL_PYRFU (Q8U3J1) Putative translation initiation factor eIF-...	29	7.8

>MTNA_THEMA (Q9X013) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 343

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           YVAAPV++ID ++ SG++I IEER P+E+ +  G    ++A  G+ V NPAFDVT   LI
Sbjct: 263 YVAAPVSTIDPTIRSGEEIPIEERRPEEVTHCGGN---RIAPEGVKVLNPAFDVTENTLI 319

Query: 314 TAIITEKGVITKSDPDGTFDIKSFIE 237
           TAIITEKGVI    P    +IK  +E
Sbjct: 320 TAIITEKGVIR---PPFEENIKKILE 342

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>MTNA_SYNY3 (P74497) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 351

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           +VAAP++++D +L  G QI IEER P E+   EG    ++   G   +NPAFDVTPA+LI
Sbjct: 275 FVAAPLSTVDFALDDGSQIPIEERDPVEIYQPEGN---RITPEGAEFYNPAFDVTPASLI 331

Query: 314 TAIITEKGVI 285
           TAIITE+G I
Sbjct: 332 TAIITEQGAI 341

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>EI2B1_PYRFU (Q8U178) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 356

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           +  AP++SID+SL SGK+I IEERSP+E+L   G       A  + V+NPAFDVTP   +
Sbjct: 276 FTVAPLSSIDMSLSSGKEIPIEERSPEEVLTCGGCR----IAPDVPVYNPAFDVTPHKYL 331

Query: 314 TAIITEKGVI 285
           T IIT++GV+
Sbjct: 332 TGIITDRGVV 341

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>MTNA_PSESM (Q885T7) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 358

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 34/73 (46%), Positives = 49/73 (67%)
 Frame = -3

Query: 491 VAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLIT 312
           V AP ++ID+ + SG  I+IEER  +ELL     +G Q   + +  +NP FDVTPA+LI 
Sbjct: 276 VVAPSSTIDMEMASGDDIIIEERDGRELLE----VGGQRVGADVEAFNPVFDVTPADLID 331

Query: 311 AIITEKGVITKSD 273
           AI+TEKG++ + D
Sbjct: 332 AIVTEKGIVERPD 344

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>MTNA_PSEAE (Q9HZ65) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 358

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 35/75 (46%), Positives = 52/75 (69%)
 Frame = -3

Query: 491 VAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLIT 312
           V AP ++ID++L SG+ I IEER  +ELL     +G +  A+ +  +NP FDVTPA+LI 
Sbjct: 276 VVAPSSTIDMNLESGEDIPIEERDGRELLE----IGGRRVAAEVDAYNPVFDVTPADLID 331

Query: 311 AIITEKGVITKSDPD 267
           AI+TE+GV+ + D +
Sbjct: 332 AIVTERGVVERPDAE 346

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>MTNA_XYLFA (Q9PAG5) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 354

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = -3

Query: 491 VAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLIT 312
           V A   ++D+   +G+ I IE+R P+ELL   G  G +  A GI+ WNP FDVTP  LI 
Sbjct: 275 VVASAATVDMDTTAGEAIEIEQRDPEELL---GVSGVRTVAEGIAAWNPVFDVTPGALID 331

Query: 311 AIITEKGVITKSD 273
           AI+TE+GVI   D
Sbjct: 332 AIVTERGVIQSPD 344

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>MTNA_XYLFT (Q87A92) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 354

 Score = 68.9 bits (167), Expect = 7e-12
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = -3

Query: 491 VAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLIT 312
           V A   ++D+   +G+ I IE+R P+ELL   G  G +  A GI+ WNP FDVTP  LI 
Sbjct: 275 VVASAATVDMDTVAGEAIEIEQRDPEELL---GVSGVRTVAEGIAAWNPVFDVTPGALID 331

Query: 311 AIITEKGVITKSD 273
           AI+TE+GVI   D
Sbjct: 332 AIVTERGVIQSPD 344

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>EI2B1_PYRAB (Q9UZ16) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 356

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 36/70 (51%), Positives = 48/70 (68%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           +  AP++SID+SL SGK+I IEERSP+E+L   G       A  + V+NPAFDVTP   +
Sbjct: 276 FAVAPLSSIDMSLKSGKEIPIEERSPEEVLTCGGCR----IAPDVPVYNPAFDVTPHKYV 331

Query: 314 TAIITEKGVI 285
           T IIT+K V+
Sbjct: 332 TGIITDKRVV 341

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>EI2B1_PYRHO (O58433) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 364

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           +  AP++SID+ L SGK I IEERSP+E+L   G       A  + V+NPAFDVTP   +
Sbjct: 276 FAVAPLSSIDMELKSGKDIPIEERSPEEVLTCGGCR----IAPDVPVYNPAFDVTPHKYL 331

Query: 314 TAIITEKGVI 285
           T IIT++GV+
Sbjct: 332 TGIITDRGVV 341

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>MTNA_PSEPK (Q88M09) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 358

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 34/73 (46%), Positives = 48/73 (65%)
 Frame = -3

Query: 491 VAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLIT 312
           V AP TSIDL+L +G+ I +EER   E L+     G    + G+ V+NP FDVTPA+LI 
Sbjct: 276 VVAPSTSIDLNLATGEDIPLEERDADEWLD----FGGTPVSPGVEVFNPVFDVTPADLID 331

Query: 311 AIITEKGVITKSD 273
            I+TE+G++ + D
Sbjct: 332 VIVTERGIVERPD 344

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>YP18_YEAST (Q06489) Hypothetical 45.0 kDa protein in PIS1-CLB2 intergenic|
           region
          Length = 411

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKE-------LLNSEGG-----------LGKQ-VA 372
           +V AP T+ID    +G  I++EER+P+E       ++N E G            GK  +A
Sbjct: 309 FVVAPKTTIDNVTETGDDIIVEERNPEEFKVVTGTVINPENGSLILNESGEPITGKVGIA 368

Query: 371 ASGISVWNPAFDVTPANLITAIITEKGVITKSDPDGTFDIKS 246
              I+VWNPAFD+TP  LI  IITE+GV TK+   G F ++S
Sbjct: 369 PLEINVWNPAFDITPHELIDGIITEEGVFTKNS-SGEFQLES 409

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>MTNA_BACSU (O31662) Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)|
           (MTR-1-P isomerase)
          Length = 353

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 33/71 (46%), Positives = 48/71 (67%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           +VAAP+++ D  +  G  I IEER P+E+    G    + A S + V+NPAFD+TP +LI
Sbjct: 269 FVAAPLSTFDTKVKCGADIPIEERDPEEVRQISG---VRTAPSNVPVFNPAFDITPHDLI 325

Query: 314 TAIITEKGVIT 282
           + IITEKG++T
Sbjct: 326 SGIITEKGIMT 336

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>EI2B_AQUAE (O67879) Putative translation initiation factor eIF-2B (eIF-2B|
           GDP-GTP exchange factor)
          Length = 456

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 34/69 (49%), Positives = 47/69 (68%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           YVAAP ++ID ++ SG++I+IEERSP+E+       G  +A       + AFD+TPA LI
Sbjct: 379 YVAAPTSTIDSNIKSGEEIIIEERSPEEVKVCG---GCAIAPKESDALHLAFDITPAELI 435

Query: 314 TAIITEKGV 288
           T IITEKG+
Sbjct: 436 TGIITEKGI 444

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>MTNA_LEPIN (Q8F2A8) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 364

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKE------LLNSEGG-LGKQ--VAASGISVWNPA 342
           YVAA   S+D  +P+G  I IE R  +E      L +S+G  L K+  +A  G+   NP+
Sbjct: 271 YVAATAKSMDFRIPNGSYIPIEMRKEEEITSFGFLKDSDGKPLLKEGVIAPKGMKALNPS 330

Query: 341 FDVTPANLITAIITEKGVIT 282
           FDVTPA+LIT IITEKG+++
Sbjct: 331 FDVTPASLITGIITEKGIVS 350

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>MTNA_LEPIC (Q72T46) Probable methylthioribose-1-phosphate isomerase (EC|
           5.3.1.23) (MTR-1-P isomerase)
          Length = 364

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKE------LLNSEGG-LGKQ--VAASGISVWNPA 342
           YVAA   S+D  +P+G  I IE R  +E      L +S+G  L K+  +A  G+   NP+
Sbjct: 271 YVAATAKSMDFRIPNGSYIPIEMRKEEEITSFGFLKDSDGKPLLKEGVIAPKGMKALNPS 330

Query: 341 FDVTPANLITAIITEKGVIT 282
           FDVTPA+LIT IITEKG+++
Sbjct: 331 FDVTPASLITGIITEKGIVS 350

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>YQJQ_CAEEL (Q93169) Hypothetical protein C01G10.9 in chromosome V|
          Length = 366

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 32/68 (47%), Positives = 44/68 (64%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           Y   P T+I+ ++ +G++I IEER   E+L   G L   +  S   VWNPAFDVTPA+LI
Sbjct: 289 YPVVPFTTINKNIATGEEIKIEERPSAEMLRVNGVL---IGNSECPVWNPAFDVTPAHLI 345

Query: 314 TAIITEKG 291
           T I+T+ G
Sbjct: 346 TKILTDFG 353

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>EI2B1_METJA (Q57896) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 329

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           YVAAP+++ DL   S + ++IEER  KE+   +G    ++   G+  +N AFD TP +LI
Sbjct: 252 YVAAPLSTFDLR-SSEEDVIIEERDEKEVAYIDG---VRIVPEGVGCYNYAFDKTPPDLI 307

Query: 314 TAIITEKGVI 285
           TAIITEKG++
Sbjct: 308 TAIITEKGIV 317

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>EI2B1_AERPE (Q9YE84) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 370

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLN--SEGGLGKQVAASGISVWNPAFDVTPAN 321
           YVAAP ++        + IVIEERSP E+    SE G  + +    +  +NP+FDVTP  
Sbjct: 287 YVAAPASTFQPDA-GPEAIVIEERSPDEVRGVISEAGYVR-ITLGDVEAYNPSFDVTPPE 344

Query: 320 LITAIITEKGVI 285
           LITA IT++GVI
Sbjct: 345 LITAFITDRGVI 356

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>EI2B1_ARCFU (O29877) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 339

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 32/70 (45%), Positives = 43/70 (61%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           YVAAP  + D    + K +VIEER  +EL+       +Q+A   + V+NPAFD TP   +
Sbjct: 260 YVAAPKATFDWER-TAKDVVIEERPREELIFCGK---RQIAPLNVKVYNPAFDPTPLENV 315

Query: 314 TAIITEKGVI 285
           TA+ITE GVI
Sbjct: 316 TALITEYGVI 325

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>EI2B1_METTH (O27900) Putative translation initiation factor eIF-2B subunit 1|
           (eIF-2B GDP-GTP exchange factor)
          Length = 311

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           YVAAP+++ D    S   I IEER P E+L   G    ++A       NPAFD+ P++LI
Sbjct: 243 YVAAPMSTFDTE-NSIYDIEIEERDPAEVLYYGGC---RIAPQDTEAINPAFDIVPSDLI 298

Query: 314 TAIITEKGVI 285
           + IITEKG++
Sbjct: 299 SGIITEKGIL 308

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>EI2B2_PYRAB (Q9V281) Putative translation initiation factor eIF-2B subunit 2|
           (eIF-2B GDP-GTP exchange factor)
          Length = 324

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 32/55 (58%)
 Frame = -3

Query: 449 GKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLITAIITEKGVI 285
           G+ + IE R P E++  E     +     I VWNPAFDVTP   I  IITEKG+I
Sbjct: 248 GQLVEIEMRDPTEVIPEEE---LKTWPKNIEVWNPAFDVTPPEYIDVIITEKGII 299

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>EI2B2_METJA (Q57586) Putative translation initiation factor eIF-2B subunit 2|
           (eIF-2B GDP-GTP exchange factor)
          Length = 308

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 29/55 (52%), Positives = 34/55 (61%)
 Frame = -3

Query: 449 GKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLITAIITEKGVI 285
           G+ I IEERSP+E+   E          GI + NPAFDVTPA  I AIITE G+I
Sbjct: 242 GELIEIEERSPEEVAVFEDKY------KGIKIRNPAFDVTPAKYIDAIITEVGLI 290

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>EI2B2_PYRHO (O57947) Putative translation initiation factor eIF-2B subunit 2|
           (eIF-2B GDP-GTP exchange factor)
          Length = 324

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 25/55 (45%), Positives = 32/55 (58%)
 Frame = -3

Query: 449 GKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLITAIITEKGVI 285
           G+ + IE R P E++  E     +     I VWNPAFDVTP   I  IITE+G+I
Sbjct: 248 GQLVEIEMRDPTEVIPEEE---LRTWPKNIEVWNPAFDVTPPEYIDVIITERGII 299

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>EI2B2_ARCFU (O28242) Putative translation initiation factor eIF-2B subunit 2|
           (eIF-2B GDP-GTP exchange factor)
          Length = 313

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 25/55 (45%), Positives = 32/55 (58%)
 Frame = -3

Query: 449 GKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLITAIITEKGVI 285
           G+ +VIEER  +E+   E      +   G+ V NPAFDVTP + I  IITE G I
Sbjct: 234 GELVVIEERDAREVAPEE------ILKLGVKVRNPAFDVTPRDYIDVIITEIGAI 282

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>EI2B2_PYRFU (Q8U4G6) Putative translation initiation factor eIF-2B subunit 2|
           (eIF-2B GDP-GTP exchange factor)
          Length = 324

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 26/55 (47%), Positives = 31/55 (56%)
 Frame = -3

Query: 449 GKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLITAIITEKGVI 285
           G+ + IE R P E++  E     +     I V NPAFDVTP   I  IITEKGVI
Sbjct: 248 GQLVEIEMRDPTEVVPKEE---LETWPKNIEVLNPAFDVTPPEYIDVIITEKGVI 299

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>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A|
          Length = 407

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 340 KAGFQTDIPDAATCFPRPPSEFNNSLGDLSSMTICFPDGRERSIE 474
           K+ F        T  PRPP+   +S+G+L  +    P GR RS+E
Sbjct: 299 KSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGRGRSVE 343

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>YR073_MIMIV (Q5UPF0) Hypothetical protein R73|
          Length = 232

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 84  RNTSRTRLYFSHFERSYCWVYNMSILSSIV*EGCSTTFMPNNAHWRASLGTLNEAFDVES 263
           +NT +  +  +H E  YCW +       +  E   + +  N+ ++ +S  ++NE  + E+
Sbjct: 28  KNTHKITIKCTHNEEFYCWTF-------MTCEIIKSDYSSNSFYYDSSNSSINENINDEN 80

Query: 264 S--IRIRLCDHTLF 299
           S  + I +C   LF
Sbjct: 81  SNFLSINICPEMLF 94

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>GYS_NEUCR (O93869) Glycogen [starch] synthase (EC 2.4.1.11)|
          Length = 706

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +1

Query: 160 YHQLCEKDVPPHSCQTTLTGEHHLAHSMKLLMSKVPSG---SDFVITPFSVM 306
           YH+ C +    HSC    T  H  A+  + L+ + P G   +   +T FS M
Sbjct: 225 YHRYCIERAAAHSCDVFTTVSHITAYESEHLLKRKPDGVLPNGLNVTKFSAM 276

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>EI2BL_PYRAB (Q9UYB6) Putative translation initiation factor eIF-2B subunit|
           2-like (eIF-2B GDP-GTP exchange factor)
          Length = 276

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 383 KQVAASGISVWNPAFDVTPANLITAIITEKGVI 285
           +  + SG  V N  FD+TP   I  IITE G++
Sbjct: 237 RDFSRSGFRVRNVLFDLTPWKFIRGIITELGIV 269

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>TLR4_PAPAN (Q9TSP2) Toll-like receptor 4 precursor (CD284 antigen)|
          Length = 826

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +2

Query: 62  LDNKHSSSQYISYTALFFSLRKILLLGVQHEHPII 166
           LD +HS+ + +S  ++F SLR ++ L + H H  +
Sbjct: 427 LDFQHSNLKQMSQFSVFLSLRNLIYLDISHTHTTV 461

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>EI2BD_RAT (Q63186) Translation initiation factor eIF-2B delta subunit (eIF-2B|
           GDP-GTP exchange factor)
          Length = 524

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 368 SGISVWNPAFDVTPANLITAIITEKGVITKSDPDGTFDIKS 246
           S + + N  +DVTP  L+  +ITE G+I  S       +KS
Sbjct: 481 SSLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKS 521

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>TLR4_PANPA (Q9TTN0) Toll-like receptor 4 precursor (CD284 antigen)|
          Length = 839

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 62  LDNKHSSSQYISYTALFFSLRKILLLGVQHEH 157
           LD +HS+ + +S  ++F SLR ++ L + H H
Sbjct: 427 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 458

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>TLR4_HUMAN (O00206) Toll-like receptor 4 precursor (hToll) (CD284 antigen)|
          Length = 839

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 62  LDNKHSSSQYISYTALFFSLRKILLLGVQHEH 157
           LD +HS+ + +S  ++F SLR ++ L + H H
Sbjct: 427 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 458

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>TLR4_PONPY (Q8SPE9) Toll-like receptor 4 precursor (CD284 antigen)|
          Length = 828

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 62  LDNKHSSSQYISYTALFFSLRKILLLGVQHEH 157
           LD +HS+ + +S  ++F SLR ++ L + H H
Sbjct: 425 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 456

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>TLR4_GORGO (Q8SPE8) Toll-like receptor 4 precursor (CD284 antigen)|
          Length = 837

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 62  LDNKHSSSQYISYTALFFSLRKILLLGVQHEH 157
           LD +HS+ + +S  ++F SLR ++ L + H H
Sbjct: 425 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 456

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>EI2BL_PYRHO (O58185) Putative translation initiation factor eIF-2B subunit|
           2-like (eIF-2B GDP-GTP exchange factor)
          Length = 276

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = -3

Query: 494 YVAAPVTSIDLSLPSGKQIVIEERSPKELLNSEGGLGKQVAASGISVWNPAFDVTPANLI 315
           YVAA       +L SG  +++E               + +    + + N  FDVTP   +
Sbjct: 215 YVAAETYKFHPTLKSGDVMLME---------------RDLIRGNVRIRNVLFDVTPWKYV 259

Query: 314 TAIITEKGVI 285
             IITE G++
Sbjct: 260 RGIITELGIV 269

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>FHL5_MOUSE (Q9WTX7) Four and a half LIM domains protein 5 (FHL-5) (Activator|
           of cAMP-responsive element modulator in testis)
           (Activator of CREM in testis)
          Length = 284

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = +1

Query: 169 LCEKDVPPHS-------CQTTLTGEHHLAHSMKLLMSKVPSGSD 279
           +C +D   HS       C  +L GE  L H+M++L  K  SG+D
Sbjct: 238 ICFQDRQWHSECFNCGKCSVSLVGEGFLTHNMEILCRKCGSGAD 281

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>EI2BB_RAT (Q62818) Translation initiation factor eIF-2B beta subunit (eIF-2B|
           GDP-GTP exchange factor)
          Length = 351

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 491 VAAPVTSIDLSLPSGKQIVIEERSPKELLN-SEGGLGKQVAASGISVWNPAFDVTPANLI 315
           V AP+  +    PS +    +  +P+E+L  +EG + ++V     SV  P FD  P +LI
Sbjct: 267 VCAPMFKLSPQFPSEEDSFHKFVAPEEVLPFTEGDILEKV-----SVHCPVFDYVPPDLI 321

Query: 314 TAIITEKG 291
           T  I+  G
Sbjct: 322 TLFISNIG 329

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>EI2BB_MOUSE (Q99LD9) Translation initiation factor eIF-2B beta subunit (eIF-2B|
           GDP-GTP exchange factor)
          Length = 351

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 491 VAAPVTSIDLSLPSGKQIVIEERSPKELLN-SEGGLGKQVAASGISVWNPAFDVTPANLI 315
           V AP+  +    PS +    +  +P+E+L  +EG + ++V     SV  P FD  P +LI
Sbjct: 267 VCAPMFKLSPQFPSEEDSFHKFVAPEEVLPFTEGDILEKV-----SVHCPVFDYVPPDLI 321

Query: 314 TAIITEKG 291
           T  I+  G
Sbjct: 322 TLFISNIG 329

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>Y1804_BACCR (Q81F03) UPF0176 protein BC_1804|
          Length = 319

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 162 IGCSCCTPNNKIFRSEKNKAVYEMYCEDECLLS 64
           + CS    N KI  SE+N+A Y   C  EC +S
Sbjct: 260 VNCSNPECNKKILCSEENEAKYLRACSHECRVS 292

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>EI2BD_HUMAN (Q9UI10) Translation initiation factor eIF-2B delta subunit (eIF-2B|
           GDP-GTP exchange factor)
          Length = 523

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 368 SGISVWNPAFDVTPANLITAIITEKGVITKSDPDGTFDIKS 246
           + + + N  +DVTP  L+  +ITE G+I  S       +KS
Sbjct: 480 ASLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKS 520

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>EI2BD_MOUSE (Q61749) Translation initiation factor eIF-2B delta subunit (eIF-2B|
           GDP-GTP exchange factor)
          Length = 524

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
 Frame = -3

Query: 386 GKQVAASG------ISVWNPAFDVTPANLITAIITEKGVITKSDPDGTFDIKS 246
           G QVA +       + + N  +DVTP  L+  +ITE G+I  S       +KS
Sbjct: 469 GDQVALANWQSHPSLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKS 521

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>EI2BL_PYRFU (Q8U3J1) Putative translation initiation factor eIF-2B subunit|
           2-like (eIF-2B GDP-GTP exchange factor)
          Length = 276

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -3

Query: 365 GISVWNPAFDVTPANLITAIITEKGVI 285
           G  V N  FD+TP   I  IITE G+I
Sbjct: 243 GSRVRNVLFDITPWKFIRGIITELGII 269


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,666,516
Number of Sequences: 219361
Number of extensions: 1427493
Number of successful extensions: 4308
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4291
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result