ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29f01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192999.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 939 Score = 220 bits (111), Expect = 3e-54 Identities = 293/353 (83%), Gaps = 3/353 (0%) Strand = Plus / Minus Query: 126 agctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctggtagtag 185 |||| |||||||||||| ||||| || | ||||||| | ||||||||||||||||||||| Sbjct: 929 agcttcttgacggcctggaacctagcggtcttgtcgccgaacttggtgccctggtagtag 870 Query: 186 tccaggtagtcgccgaacctgtacggcccggggtacacctgcctcgccgtgggcgccggc 245 ||||||||||||||| ||||||||||||||||||| | || ||||| | ||||||| Sbjct: 869 tccaggtagtcgccgtacctgtacggcccggggta---cggcgccgccgccgtcgccggc 813 Query: 246 gccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcgcccttcc 305 || | ||||| || | |||||||||||||||||| || || ||||| ||||| || || Sbjct: 812 gcgatcacggcgtcgggcccggggttgtagaacgtggcgacggacaggcggcggccctcg 753 Query: 306 gcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcacctccagc 365 ||| ||||||| |||||||||| |||||| |||||||||||||||| | |||||||| | Sbjct: 752 gcgccggcggcgacgcggtgcacgacgctcttgtaggcgccgccgctgagcacctccacc 693 Query: 366 tggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggacccactcc 425 ||||| |||| ||||||||| | | || || | ||| ||||| |||||||||||||| Sbjct: 692 tggtcgccgatgttgacgaacagccggccgcgccgggtcgggccgacggggacccactcg 633 Query: 426 cggtcgcccctgaagaactccagcccgccgaccacgtcgtcctgcaggagcag 478 ||| |||| | | |||||| ||||||||||| |||||||||| |||||||| Sbjct: 632 cggccgccgcggtggaactcgagcccgccgacggcgtcgtcctggaggagcag 580
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 220 bits (111), Expect = 3e-54 Identities = 293/353 (83%), Gaps = 3/353 (0%) Strand = Plus / Minus Query: 126 agctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctggtagtag 185 |||| |||||||||||| ||||| || | ||||||| | ||||||||||||||||||||| Sbjct: 22486945 agcttcttgacggcctggaacctagcggtcttgtcgccgaacttggtgccctggtagtag 22486886 Query: 186 tccaggtagtcgccgaacctgtacggcccggggtacacctgcctcgccgtgggcgccggc 245 ||||||||||||||| ||||||||||||||||||| | || ||||| | ||||||| Sbjct: 22486885 tccaggtagtcgccgtacctgtacggcccggggta---cggcgccgccgccgtcgccggc 22486829 Query: 246 gccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcgcccttcc 305 || | ||||| || | |||||||||||||||||| || || ||||| ||||| || || Sbjct: 22486828 gcgatcacggcgtcgggcccggggttgtagaacgtggcgacggacaggcggcggccctcg 22486769 Query: 306 gcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcacctccagc 365 ||| ||||||| |||||||||| |||||| |||||||||||||||| | |||||||| | Sbjct: 22486768 gcgccggcggcgacgcggtgcacgacgctcttgtaggcgccgccgctgagcacctccacc 22486709 Query: 366 tggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggacccactcc 425 ||||| |||| ||||||||| | | || || | ||| ||||| |||||||||||||| Sbjct: 22486708 tggtcgccgatgttgacgaacagccggccgcgccgggtcgggccgacggggacccactcg 22486649 Query: 426 cggtcgcccctgaagaactccagcccgccgaccacgtcgtcctgcaggagcag 478 ||| |||| | | |||||| ||||||||||| |||||||||| |||||||| Sbjct: 22486648 cggccgccgcggtggaactcgagcccgccgacggcgtcgtcctggaggagcag 22486596
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 220 bits (111), Expect = 3e-54 Identities = 293/353 (83%), Gaps = 3/353 (0%) Strand = Plus / Minus Query: 126 agctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctggtagtag 185 |||| |||||||||||| ||||| || | ||||||| | ||||||||||||||||||||| Sbjct: 2682 agcttcttgacggcctggaacctagcggtcttgtcgccgaacttggtgccctggtagtag 2623 Query: 186 tccaggtagtcgccgaacctgtacggcccggggtacacctgcctcgccgtgggcgccggc 245 ||||||||||||||| ||||||||||||||||||| | || ||||| | ||||||| Sbjct: 2622 tccaggtagtcgccgtacctgtacggcccggggta---cggcgccgccgccgtcgccggc 2566 Query: 246 gccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcgcccttcc 305 || | ||||| || | |||||||||||||||||| || || ||||| ||||| || || Sbjct: 2565 gcgatcacggcgtcgggcccggggttgtagaacgtggcgacggacaggcggcggccctcg 2506 Query: 306 gcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcacctccagc 365 ||| ||||||| |||||||||| |||||| |||||||||||||||| | |||||||| | Sbjct: 2505 gcgccggcggcgacgcggtgcacgacgctcttgtaggcgccgccgctgagcacctccacc 2446 Query: 366 tggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggacccactcc 425 ||||| |||| ||||||||| | | || || | ||| ||||| |||||||||||||| Sbjct: 2445 tggtcgccgatgttgacgaacagccggccgcgccgggtcgggccgacggggacccactcg 2386 Query: 426 cggtcgcccctgaagaactccagcccgccgaccacgtcgtcctgcaggagcag 478 ||| |||| | | |||||| ||||||||||| |||||||||| |||||||| Sbjct: 2385 cggccgccgcggtggaactcgagcccgccgacggcgtcgtcctggaggagcag 2333
>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672C09 Length = 145655 Score = 220 bits (111), Expect = 3e-54 Identities = 293/353 (83%), Gaps = 3/353 (0%) Strand = Plus / Minus Query: 126 agctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctggtagtag 185 |||| |||||||||||| ||||| || | ||||||| | ||||||||||||||||||||| Sbjct: 111083 agcttcttgacggcctggaacctagcggtcttgtcgccgaacttggtgccctggtagtag 111024 Query: 186 tccaggtagtcgccgaacctgtacggcccggggtacacctgcctcgccgtgggcgccggc 245 ||||||||||||||| ||||||||||||||||||| | || ||||| | ||||||| Sbjct: 111023 tccaggtagtcgccgtacctgtacggcccggggta---cggcgccgccgccgtcgccggc 110967 Query: 246 gccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcgcccttcc 305 || | ||||| || | |||||||||||||||||| || || ||||| ||||| || || Sbjct: 110966 gcgatcacggcgtcgggcccggggttgtagaacgtggcgacggacaggcggcggccctcg 110907 Query: 306 gcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcacctccagc 365 ||| ||||||| |||||||||| |||||| |||||||||||||||| | |||||||| | Sbjct: 110906 gcgccggcggcgacgcggtgcacgacgctcttgtaggcgccgccgctgagcacctccacc 110847 Query: 366 tggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggacccactcc 425 ||||| |||| ||||||||| | | || || | ||| ||||| |||||||||||||| Sbjct: 110846 tggtcgccgatgttgacgaacagccggccgcgccgggtcgggccgacggggacccactcg 110787 Query: 426 cggtcgcccctgaagaactccagcccgccgaccacgtcgtcctgcaggagcag 478 ||| |||| | | |||||| ||||||||||| |||||||||| |||||||| Sbjct: 110786 cggccgccgcggtggaactcgagcccgccgacggcgtcgtcctggaggagcag 110734
>dbj|AK102472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094H01, full insert sequence Length = 1183 Score = 220 bits (111), Expect = 3e-54 Identities = 293/353 (83%), Gaps = 3/353 (0%) Strand = Plus / Minus Query: 126 agctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctggtagtag 185 |||| |||||||||||| ||||| || | ||||||| | ||||||||||||||||||||| Sbjct: 1051 agcttcttgacggcctggaacctagcggtcttgtcgccgaacttggtgccctggtagtag 992 Query: 186 tccaggtagtcgccgaacctgtacggcccggggtacacctgcctcgccgtgggcgccggc 245 ||||||||||||||| ||||||||||||||||||| | || ||||| | ||||||| Sbjct: 991 tccaggtagtcgccgtacctgtacggcccggggta---cggcgccgccgccgtcgccggc 935 Query: 246 gccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcgcccttcc 305 || | ||||| || | |||||||||||||||||| || || ||||| ||||| || || Sbjct: 934 gcgatcacggcgtcgggcccggggttgtagaacgtggcgacggacaggcggcggccctcg 875 Query: 306 gcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcacctccagc 365 ||| ||||||| |||||||||| |||||| |||||||||||||||| | |||||||| | Sbjct: 874 gcgccggcggcgacgcggtgcacgacgctcttgtaggcgccgccgctgagcacctccacc 815 Query: 366 tggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggacccactcc 425 ||||| |||| ||||||||| | | || || | ||| ||||| |||||||||||||| Sbjct: 814 tggtcgccgatgttgacgaacagccggccgcgccgggtcgggccgacggggacccactcg 755 Query: 426 cggtcgcccctgaagaactccagcccgccgaccacgtcgtcctgcaggagcag 478 ||| |||| | | |||||| ||||||||||| |||||||||| |||||||| Sbjct: 754 cggccgccgcggtggaactcgagcccgccgacggcgtcgtcctggaggagcag 702
>gb|DQ428549.1| Sorghum propinquum locus PRC1149 genomic sequence Length = 632 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 338 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 279 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 278 tagtactcgaggtagtccccgaacctgtagggtccggggtac 237 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagcctcccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428548.1| Sorghum bicolor voucher PI585454 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggcgacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagcctcccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428547.1| Sorghum bicolor voucher PI267539 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggcgacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagcctcccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428546.1| Sorghum bicolor voucher PI267408 locus PRC1149 genomic sequence Length = 634 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428545.1| Sorghum bicolor voucher PI221607 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggcgacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagcctcccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428544.1| Sorghum bicolor voucher PI152702 locus PRC1149 genomic sequence Length = 640 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggcgacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428543.1| Sorghum bicolor voucher NSL92371 locus PRC1149 genomic sequence Length = 642 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 332 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 273 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 272 tagtactcgaggtagtccccgaacctgtagggtccggggtac 231 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428542.1| Sorghum bicolor voucher NSL87902 locus PRC1149 genomic sequence Length = 642 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 332 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 273 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 272 tagtactcgaggtagtccccgaacctgtagggtccggggtac 231 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428541.1| Sorghum bicolor voucher NSL77217 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428540.1| Sorghum bicolor voucher NSL77034 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428539.1| Sorghum bicolor voucher NSL56174 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428538.1| Sorghum bicolor voucher NSL56003 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428537.1| Sorghum bicolor voucher NSL55243 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428536.1| Sorghum bicolor voucher NSL51365 locus PRC1149 genomic sequence Length = 640 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggcgacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428535.1| Sorghum bicolor voucher NSL51030 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggcgacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagcctcccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428534.1| Sorghum bicolor voucher NSL50875 locus PRC1149 genomic sequence Length = 639 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggcgacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagcctcccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|DQ428533.1| Sorghum bicolor voucher BTx623 locus PRC1149 genomic sequence Length = 635 Score = 99.6 bits (50), Expect = 8e-18 Identities = 89/102 (87%) Strand = Plus / Minus Query: 120 ccgaacagctccttgacggcctgcaacctcgccgccttgtcggcaaacttggtgccctgg 179 |||| ||||| |||||||||||| ||||| || |||||||| | ||||||||||||||| Sbjct: 335 ccgagcagcttcttgacggcctggaacctggcgtccttgtcgccgaacttggtgccctgg 276 Query: 180 tagtagtccaggtagtcgccgaacctgtacggcccggggtac 221 ||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 275 tagtactcgaggtagtccccgaacctgtagggtccggggtac 234 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 239 cgccggcgccacgacggcttccgccccggggttgtagaacgtcgccaccgacagccggcg 298 |||||||||||| ||||| || | || |||||||||||||| || || ||||| ||||| Sbjct: 195 cgccggcgccaccacggcgtcggggcctgggttgtagaacgtggctacggacaggcggcg 136 Query: 299 cccttccgcgacggcggcaacgcggtgcagcacgctcctgtaggcgccgccgctcatcac 358 || | | |||| || |||||||||| | ||||| ||||||||||||||| | ||| Sbjct: 135 gccctggtccccggccgcgacgcggtgcacgatgctccggtaggcgccgccgctgagcac 76 Query: 359 ctccagctggtccccgaggttgacgaagattctgctgcccttggtggggcccacggggac 418 ||| | ||||||||||| ||||||||||| || | |||||||||||| || |||||||| Sbjct: 75 ctcgatctggtccccgatgttgacgaagagccttccgcccttggtgggtccgacggggac 16 Query: 419 cca 421 ||| Sbjct: 15 cca 13
>gb|AY521566.1| Saccharum officinarum 1-aminocyclopropane-1-carboxylate oxidase (aco) mRNA, complete cds Length = 1307 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 |||||||||||||||||||| |||||||||| Sbjct: 814 atcacctccagctggtcccccaggttgacga 784
>emb|X85747.1|OS1A1COX O.sativa mRNA for 1-aminocyclopropane-1-carboxylate oxidase Length = 1595 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 1111 atcacctccagctggtcgccgaggttgacga 1081
>gb|AF442821.1|AF442821 Saccharum officinarum 1-aminocyclopropane-1-carboxylate oxidase (ACO) gene, partial cds Length = 940 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 |||||||||||||||||||| |||||||||| Sbjct: 708 atcacctccagctggtcccccaggttgacga 678
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 16871774 atcacctccagctggtcgccgaggttgacga 16871744 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 16832069 atcacctccagctggtcgccgaggttgacga 16832099
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 1587 atcacctccagctggtcgccgaggttgacga 1557
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 69465 atcacctccagctggtcgccgaggttgacga 69435 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 29760 atcacctccagctggtcgccgaggttgacga 29790
>dbj|AK104933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C08, full insert sequence Length = 1326 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 748 atcacctccagctggtcgccgaggttgacga 718
>dbj|AK065039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H16, full insert sequence Length = 1414 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 738 atcacctccagctggtcgccgaggttgacga 708
>dbj|AK058296.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F04, full insert sequence Length = 1426 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 805 atcacctccagctggtcgccgaggttgacga 775
>gb|AF049888.1|AF049888 Oryza sativa 1-aminocyclopropane-1-carboxylate oxidase (ACO1) mRNA, partial cds Length = 1072 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| ||||||||||||| Sbjct: 665 atcacctccagctggtcgccgaggttgacga 635
>gb|DQ122175.1| Gossypium hirsutum ACC oxidase ACO4 mRNA, complete cds Length = 1199 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttga 381 ||||||||||||||||||||||||| Sbjct: 761 acctccagctggtccccgaggttga 737
>gb|U19856.1|PHU19856 Pelargonium hortorum 1-aminocyclopropane-1-carboxylate oxidase mRNA, complete cds Length = 1289 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttga 381 |||||||| ||||||||||||||||||| Sbjct: 758 atcacctcaagctggtccccgaggttga 731
>dbj|AB044747.1| Phyllostachys edulis BA-ACO mRNA for 1-aminocyclopropane-1-carboxylate oxidase, complete cds Length = 1375 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 321 cggtgcagcacgctcctgtaggcgccgccgctcatcacctccagctggtccccgaggttg 380 ||||||||||||||| |||| |||| | | |||||||| |||||||| ||||||||| Sbjct: 831 cggtgcagcacgctcttgtacctgccgttggtgatcacctcgagctggtcgccgaggttg 772 Query: 381 acga 384 |||| Sbjct: 771 acga 768
>emb|X69935.1|CMEFEA C.melo mRNA for ethylene-forming enzyme Length = 1230 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 |||||||| || ||||||||||||||||||| Sbjct: 703 atcacctcaagttggtccccgaggttgacga 673
>gb|AY109855.1| Zea mays CL955_1 mRNA sequence Length = 1202 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| || |||||||||| Sbjct: 790 atcacctccagctggtcgcccaggttgacga 760
>gb|AF079589.1|AF079589 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, partial cds Length = 876 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 ||||||||||||||||| |||| |||||||| Sbjct: 308 atcacctccagctggtcgccgatgttgacga 278
>dbj|D31727.1|CUS1A1CO Cucumis melo mRNA for 1-aminocyclopropane-1-carboxylate oxidase, complete cds Length = 1282 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttgacga 384 |||||||| || ||||||||||||||||||| Sbjct: 748 atcacctcaagttggtccccgaggttgacga 718
>gb|AC024772.1| Caenorhabditis elegans cosmid Y40C5A, complete sequence Length = 45870 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 gattttccgaaaaaagaaacaaatc 44 ||||||| ||||||||||||||||| Sbjct: 21876 gattttctgaaaaaagaaacaaatc 21852
>gb|AY804252.1| Musa acuminata ACC oxidase (MAO3) gene, complete cds Length = 3718 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 2651 acctcgagctggtcgccgaggttgacga 2624
>ref|NM_187384.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3825 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 acacctgcctcgccgtgggc 239 |||||||||||||||||||| Sbjct: 3766 acacctgcctcgccgtgggc 3747
>gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, complete sequence Length = 219128 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 agattttccgaaaaaagaaa 38 |||||||||||||||||||| Sbjct: 215087 agattttccgaaaaaagaaa 215068
>ref|XM_708760.1| Candida albicans SC5314 putative mitochondrial presequence translocase guide protein (CaO19.8297), mRNA Length = 1410 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 gttgacgaagattctgctgc 396 |||||||||||||||||||| Sbjct: 868 gttgacgaagattctgctgc 887
>ref|XM_708720.1| Candida albicans SC5314 putative mitochondrial presequence translocase guide protein (CaO19.680), mRNA Length = 1410 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 gttgacgaagattctgctgc 396 |||||||||||||||||||| Sbjct: 868 gttgacgaagattctgctgc 887
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ccggcgccacgacggcttccgccc 264 |||||||||||||||||| ||||| Sbjct: 2185950 ccggcgccacgacggcttacgccc 2185973
>gb|U86045.1|MSU86045 Musa sp. 1-aminocyclopropane-1-carboxylate oxidase (MAO2) gene, complete cds Length = 3718 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 2651 acctcgagctggtcgccgaggttgacga 2624
>emb|X95599.1|MSPCABO1 M.acuminata mRNA for 1-aminocyclopropane-1-carboxylate oxidase Length = 1231 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| ||||| |||||||||||||||| Sbjct: 694 acctcaagctgatccccgaggttgacga 667
>emb|X95551.1|CMACO1 C.melo ACC oxidase gene (clone CM-ACO1) Length = 2366 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| || ||||||||||||||||||| Sbjct: 1704 acctcaagttggtccccgaggttgacga 1677
>emb|X90711.1|BPLPSBLOC Bordetella pertussis lipopolysaccharide biosynthesis locus baf gene, waaA, waaB & wlbA,B,C,D,E,F,G,H,I,J & L genes Length = 15389 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 230 cgccgtgggcgccggcgccacgacggcttccg 261 ||||| |||||||||||||||| ||| ||||| Sbjct: 5317 cgccgagggcgccggcgccacgccggtttccg 5348
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cgccgtgggcgccggcgcca 249 |||||||||||||||||||| Sbjct: 178967 cgccgtgggcgccggcgcca 178986
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 230 cgccgtgggcgccggcgccacgacggcttccg 261 ||||| |||||||||||||||| ||| ||||| Sbjct: 164731 cgccgagggcgccggcgccacgccggtttccg 164700
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 230 cgccgtgggcgccggcgccacgacggcttccg 261 ||||| |||||||||||||||| ||| ||||| Sbjct: 168179 cgccgagggcgccggcgccacgccggtttccg 168148
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 230 cgccgtgggcgccggcgccacgacggcttccg 261 ||||| |||||||||||||||| ||| ||||| Sbjct: 89243 cgccgagggcgccggcgccacgccggtttccg 89212
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 tgcctcgccgtgggcgccggcgcc 248 ||||||||||||| |||||||||| Sbjct: 34247 tgcctcgccgtggtcgccggcgcc 34270
>emb|AJ223232.1|MAAJ3232 Musa acuminata ACO1 gene Length = 1593 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 1108 acctcgagctggtcgccgaggttgacga 1081
>emb|AJ007747.1|BBR007747 Bordetella bronchiseptica cosmid BbLPS1 Length = 41642 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 230 cgccgtgggcgccggcgccacgacggcttccg 261 ||||| |||||||||||||||| ||| ||||| Sbjct: 36248 cgccgagggcgccggcgccacgccggtttccg 36217
>emb|BX511069.14| Zebrafish DNA sequence from clone CH211-207I1 in linkage group 20 Contains the 3' end of the gene for a novel protein similar to vertebrate dishevelled associated activator of morphogenesis 1 (DAAM1) and three novel genes, complete sequence Length = 89721 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 gccgctcatcacctccagctggtc 370 ||||||||||||||||||| |||| Sbjct: 53418 gccgctcatcacctccagcaggtc 53441
>gb|AC010007.4| Drosophila melanogaster 3L BAC RP98-17K17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175481 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ttttccgaaaaaagaaacaa 41 |||||||||||||||||||| Sbjct: 94172 ttttccgaaaaaagaaacaa 94153
>gb|U42839.2| Caenorhabditis elegans cosmid F11C7, complete sequence Length = 39556 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 attttccgaaaaaagaaaca 40 |||||||||||||||||||| Sbjct: 1740 attttccgaaaaaagaaaca 1721
>gb|AF332532.1|AF332532 Eimeria peromysci 23S ribosomal RNA gene, partial sequence; apicoplast gene for apicoplast product Length = 1172 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 ccggggtacacctgcctcgc 232 |||||||||||||||||||| Sbjct: 1036 ccggggtacacctgcctcgc 1017
>ref|XM_683385.1| PREDICTED: Danio rerio similar to Nesprin 2 (Nuclear envelope spectrin repeat protein 2) (Syne-2) (Synaptic nuclear envelope protein 2) (Nucleus and actin connecting element protein) (NUANCE protein) (LOC559994), mRNA Length = 3212 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gccgctcatcacctccagctggtc 370 ||||||||||||||||||| |||| Sbjct: 207 gccgctcatcacctccagcaggtc 184
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tccgcgacggcggcaacgcg 322 |||||||||||||||||||| Sbjct: 3766396 tccgcgacggcggcaacgcg 3766377
>gb|AY049052.1| Ananas comosus ripening- and wounding-related ACC oxidase mRNA, partial cds Length = 609 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 596 acctcgagctggtctccgaggttgacga 569
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 tgcctcgccgtgggcgccggcgcc 248 ||||||||||||| |||||||||| Sbjct: 32515513 tgcctcgccgtggtcgccggcgcc 32515536
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ttggtggggcccacggggacccac 422 ||||||||||||||| |||||||| Sbjct: 26291634 ttggtggggcccacgtggacccac 26291657
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acacctgcctcgccgtgggc 239 |||||||||||||||||||| Sbjct: 18634872 acacctgcctcgccgtgggc 18634891
>emb|AJ505611.2|MAC505611 Musa acuminata mRNA for putative aminocyclopropane carboxylate oxidase (aco gene), cultivar Ney Poovan Length = 1181 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 742 acctcgagctggtcgccgaggttgacga 715
>gb|AC154798.2| Mus musculus BAC clone RP24-495N16 from chromosome 17, complete sequence Length = 138195 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 agattttccgaaaaaagaaa 38 |||||||||||||||||||| Sbjct: 124950 agattttccgaaaaaagaaa 124969
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ggcgcccttccgcgacggcg 314 |||||||||||||||||||| Sbjct: 3266002 ggcgcccttccgcgacggcg 3266021
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acacctgcctcgccgtgggc 239 |||||||||||||||||||| Sbjct: 59926 acacctgcctcgccgtgggc 59945
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 acacctgcctcgccgtgggc 239 |||||||||||||||||||| Sbjct: 87414 acacctgcctcgccgtgggc 87433
>emb|AJ604546.1| Musa acuminata mRNA for 1-aminocyclopropane-1-carboxylate oxidase (aco gene), cultivar Robusta Length = 1171 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 718 acctcgagctggtcgccgaggttgacga 691
>dbj|BS000169.1| Pan troglodytes chromosome 22 clone:RP43-042E01, map 22, complete sequences Length = 228269 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ctcatcacctccagctggtc 370 |||||||||||||||||||| Sbjct: 97777 ctcatcacctccagctggtc 97796
>emb|AJ505610.1|MIN505610 Mangifera indica partial mRNA for putative aminocyclopropane carboxylate oxidase (aco gene), cultivar Alphonso Length = 806 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 557 acctcgagctggtcgccgaggttgacga 530
>gb|AY682558.1| Alstroemeria peruviana ACC oxidase mRNA, partial cds Length = 222 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 |||||||||||||| |||||||| |||| Sbjct: 209 acctccagctggtcaccgaggtttacga 182
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ttggtggggcccacggggacccac 422 ||||||||||||||| |||||||| Sbjct: 21215 ttggtggggcccacgtggacccac 21238
>dbj|AK070786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M09, full insert sequence Length = 1258 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 tgcctcgccgtgggcgccggcgcc 248 ||||||||||||| |||||||||| Sbjct: 520 tgcctcgccgtggtcgccggcgcc 543
>gb|AF145724.1|AF145724 Streptomyces albus integrase homolog, putative regulatory protein (sitI), oxidoreductase homolog (sitS), and AraC-like transcriptional regulator homolog (sitR) genes, complete cds; and unknown gene Length = 6439 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 caacgcggtgcagcacgctc 335 |||||||||||||||||||| Sbjct: 3640 caacgcggtgcagcacgctc 3659
>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete sequence Length = 94903 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 gcctcgccgtgggcgccggcgcca 249 |||||||||| ||||||||||||| Sbjct: 26304 gcctcgccgtcggcgccggcgcca 26327
>gb|AE003471.3| Drosophila melanogaster chromosome 3L, section 5 of 83 of the complete sequence Length = 302131 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ttttccgaaaaaagaaacaa 41 |||||||||||||||||||| Sbjct: 80914 ttttccgaaaaaagaaacaa 80895
>gb|AC005847.1|AC005847 Drosophila melanogaster DNA sequence (P1s DS03179 (D226), DS06357 (D230), DS03404 (D231), DS06962 (D232), and DS07291 (D240)), complete sequence Length = 268369 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttttccgaaaaaagaaacaa 41 |||||||||||||||||||| Sbjct: 131494 ttttccgaaaaaagaaacaa 131513
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 cccggtcgcccctgaagaac 443 |||||||||||||||||||| Sbjct: 2626848 cccggtcgcccctgaagaac 2626867
>gb|AF081917.1|AF081917 Musa acuminata 1-aminocyclopropane-1-carboxylate oxidase mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 714 acctcgagctggtcgccgaggttgacga 687
>gb|DQ303122.1| Gossypium hirsutum 1-aminocyclopropane-1-carboxylate oxidase (ACO1) mRNA, complete cds Length = 1012 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 atcacctccagctggtccccgaggttga 381 ||||||||||||||||| || ||||||| Sbjct: 720 atcacctccagctggtctcccaggttga 693
>gb|U80233.1|MSU80233 Musa acuminata 1-aminocyclopropane-1-carboxylate oxidase mRNA, complete cds Length = 1171 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 702 acctcgagctggtcgccgaggttgacga 675
>dbj|AB231866.1| Branchiostoma floridae gene for zinc finger protein AmphiZic, complete cds Length = 155361 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcacactgcacacccagtca 100 |||||||||||||||||||| Sbjct: 104793 gcacactgcacacccagtca 104812
>gb|U55770.1|MAU55770 Musa acuminata 1-aminocyclopropane-1-carboxylate oxidase mRNA, complete cds Length = 1169 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 700 acctcgagctggtcgccgaggttgacga 673
>emb|X91076.1|MIDNAACCO M.acuminata acco1 gene Length = 2496 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 acctccagctggtccccgaggttgacga 384 ||||| |||||||| ||||||||||||| Sbjct: 1773 acctcgagctggtcgccgaggttgacga 1746 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,275,822 Number of Sequences: 3902068 Number of extensions: 3275822 Number of successful extensions: 76519 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75793 Number of HSP's gapped (non-prelim): 725 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
