>gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds
          Length = 615

 Score =  115 bits (58), Expect = 1e-22
 Identities = 58/58 (100%)
 Strand = Plus / Minus

                                                                     
Query: 323 ctaggtcttcttggttttcgccggtcctcgcggtatcttgctcaaaaccttctggtcc 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctaggtcttcttggttttcgccggtcctcgcggtatcttgctcaaaaccttctggtcc 558

>gb|AC012569.18| Homo sapiens chromosome , clone RP11-8H2, complete sequence
          Length = 153276

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 157   aaatagctaatacatgcggagc 178
             ||||||||||||||||||||||
Sbjct: 52011 aaatagctaatacatgcggagc 51990

>dbj|D28126.1|HUMATPSAS Human gene for ATP synthase alpha subunit, complete cds (exon 1 to
            12)
          Length = 18004

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 157  aaatagctaatacatgcggagc 178
            ||||||||||||||||||||||
Sbjct: 2668 aaatagctaatacatgcggagc 2647

>gb|AC003685.1|AC003685 Homo sapiens Xp22 BAC GS-542M4 (Genome Systems Human BAC library)
             complete sequence
          Length = 181795

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   acaaatagctaatacatgcgg 175
             |||||||||||||||||||||
Sbjct: 53886 acaaatagctaatacatgcgg 53906

>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence
          Length = 210819

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     acacacaagggacagggcaa 93
              ||||||||||||||||||||
Sbjct: 160460 acacacaagggacagggcaa 160479

>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence
          Length = 186726

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    acacacaagggacagggcaa 93
             ||||||||||||||||||||
Sbjct: 55500 acacacaagggacagggcaa 55519

>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete sequence
          Length = 175727

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    cttgctcaaaaccttctggt 378
              ||||||||||||||||||||
Sbjct: 121447 cttgctcaaaaccttctggt 121466

>gb|AC142330.1| Pan troglodytes BAC clone RP43-25K18 from 7, complete sequence
          Length = 187596

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   caaatagctaatacatgcgg 175
             ||||||||||||||||||||
Sbjct: 32600 caaatagctaatacatgcgg 32581

>gb|AF509739.1| Loofa yellow mosaic virus DNA-A, complete sequence
          Length = 2742

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ttttcagagttgcatataca 157
            ||||||||||||||||||||
Sbjct: 1021 ttttcagagttgcatataca 1002

>gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, complete sequence
          Length = 175079

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   acaaatagctaatacatgcggagc 178
             ||||||||||||| ||||||||||
Sbjct: 45896 acaaatagctaatgcatgcggagc 45919

>gb|AC020633.3| Homo sapiens 3 BAC RP11-65E22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 148244

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   acaaatagctaatacatgcggagc 178
             ||||||| ||||||||||||||||
Sbjct: 34763 acaaatacctaatacatgcggagc 34786

>gb|AC016605.6| Homo sapiens chromosome 5 clone CTD-2154D21, complete sequence
          Length = 120871

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   acaaatagctaatacatgcggagc 178
             ||||||||||||| ||||||||||
Sbjct: 99573 acaaatagctaatgcatgcggagc 99550

>gb|AF320615.1|AF320615 Mus musculus Tnf receptor-associated factor 3 (Traf3) gene, partial
            sequence; and amnionless precursor protein (Amn) gene,
            complete cds
          Length = 14031

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 359  cttgctcaaaaccttctggt 378
            ||||||||||||||||||||
Sbjct: 2823 cttgctcaaaaccttctggt 2804

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 354      ggtatcttgctcaaaacctt 373
                ||||||||||||||||||||
Sbjct: 17622297 ggtatcttgctcaaaacctt 17622278

>gb|AC008917.6|AC008917 Homo sapiens chromosome 5 clone CTD-2273I21, complete sequence
          Length = 123050

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   acaaatagctaatacatgcggagc 178
             ||||||||||||| ||||||||||
Sbjct: 23505 acaaatagctaatgcatgcggagc 23528

>gb|AF288092.1| Naegleria gruberi mitochondrial DNA, complete genome
          Length = 49843

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tatacaaatagctaatacat 171
             ||||||||||||||||||||
Sbjct: 42463 tatacaaatagctaatacat 42444

>gb|AC012508.10| Homo sapiens BAC clone RP11-521O16 from 2, complete sequence
          Length = 185967

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   acaaatagctaatacatgcggagc 178
             ||||||| ||||||||||||||||
Sbjct: 21979 acaaatacctaatacatgcggagc 22002

>gb|AY144947.1| Saccharomyces castellii clone Contig845 PDR5 gene, partial cds
          Length = 3108

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    aacatccattcagcaggatt 28
            ||||||||||||||||||||
Sbjct: 1922 aacatccattcagcaggatt 1903

>dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           BAC clone:OJ1288_C01
          Length = 111223

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 ggtatcttgctcaaaacctt 373
           ||||||||||||||||||||
Sbjct: 195 ggtatcttgctcaaaacctt 176

>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0564B04
          Length = 64684

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   ggtatcttgctcaaaacctt 373
             ||||||||||||||||||||
Sbjct: 48645 ggtatcttgctcaaaacctt 48626

>dbj|AK073583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051P18, full
           insert sequence
          Length = 1147

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 ggtatcttgctcaaaacctt 373
           ||||||||||||||||||||
Sbjct: 824 ggtatcttgctcaaaacctt 805

>dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-349F21, complete
             sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   acaaatagctaatacatgcggagc 178
             ||||||||||||| ||||||||||
Sbjct: 77463 acaaatagctaatgcatgcggagc 77486

>dbj|AP006246.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-159M14, complete
              sequence
          Length = 178517

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 155    acaaatagctaatacatgcggagc 178
              ||||||||||||| ||||||||||
Sbjct: 168098 acaaatagctaatgcatgcggagc 168121

>gb|AC002497.1|AC002497 Human Cosmid g1940a142 from 7q31.3, complete sequence
          Length = 40846

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  caaatagctaatacatgcgg 175
            ||||||||||||||||||||
Sbjct: 6829 caaatagctaatacatgcgg 6810

>dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 6/11
          Length = 156909

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   acaaatagctaatacatgcggagc 178
             ||||||||||||| ||||||||||
Sbjct: 25036 acaaatagctaatgcatgcggagc 25059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,603,707
Number of Sequences: 3902068
Number of extensions: 2603707
Number of successful extensions: 49230
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49195
Number of HSP's gapped (non-prelim): 35
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)