ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart29e11 |
|---|---|
| Clone Library Name | barley_pub |
>UGPA_HORVU (Q43772) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 473 Score = 157 bits (398), Expect = 1e-38 Identities = 82/93 (88%), Positives = 82/93 (88%) Frame = -1 Query: 526 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVL 347 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLK VL Sbjct: 381 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKVSGDVSFGSGVVL 440 Query: 346 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 248 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI Sbjct: 441 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 473
>UGPA_SOLTU (P19595) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 476 Score = 141 bits (356), Expect = 9e-34 Identities = 70/93 (75%), Positives = 76/93 (81%) Frame = -1 Query: 526 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVL 347 +GYVIRNPAR PSNPSIELGPEFKKVANFL RFKSIPSI++LDSLK L Sbjct: 384 EGYVIRNPARSNPSNPSIELGPEFKKVANFLGRFKSIPSIIDLDSLKVTGDVWFGSGVTL 443 Query: 346 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 248 KG VT+AAK+GVKLEIPDGAV+ NKDINGPEDI Sbjct: 444 KGKVTVAAKSGVKLEIPDGAVIANKDINGPEDI 476
>UGPA_MUSAC (Q9SDX3) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 467 Score = 138 bits (347), Expect = 1e-32 Identities = 73/93 (78%), Positives = 77/93 (82%) Frame = -1 Query: 526 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVL 347 DG+VIRN AR PSNPSIELGPEFKKVANFL+RFKSIPSIVELDSLK VL Sbjct: 375 DGFVIRNKARTNPSNPSIELGPEFKKVANFLSRFKSIPSIVELDSLKVSGDVWFGEGVVL 434 Query: 346 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 248 KGNV+IAAK+GVKLEI DGAVLENK INGPEDI Sbjct: 435 KGNVSIAAKSGVKLEISDGAVLENKVINGPEDI 467
>UGPA2_ARATH (Q9M9P3) Probable UTP--glucose-1-phosphate uridylyltransferase 2| (EC 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 469 Score = 133 bits (334), Expect = 3e-31 Identities = 68/93 (73%), Positives = 75/93 (80%) Frame = -1 Query: 526 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVL 347 DG+V RN AR PSNPSIELGPEFKKVA FL+RFKSIPSIVELDSLK VL Sbjct: 377 DGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSIPSIVELDSLKVSGDVWFGSSIVL 436 Query: 346 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 248 KG VT+AAK+GVKLEIPD AV+ENK+INGPED+ Sbjct: 437 KGKVTVAAKSGVKLEIPDRAVVENKNINGPEDL 469
>UGPA1_ARATH (P57751) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 470 Score = 130 bits (327), Expect = 2e-30 Identities = 66/93 (70%), Positives = 73/93 (78%) Frame = -1 Query: 526 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVL 347 DG+V RN AR P+NP+IELGPEFKKVA+FL+RFKSIPSIVELDSLK VL Sbjct: 378 DGFVTRNKARTNPTNPAIELGPEFKKVASFLSRFKSIPSIVELDSLKVSGDVWFGSGVVL 437 Query: 346 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 248 KG VT+ A AG KLEIPD AVLENKDINGPED+ Sbjct: 438 KGKVTVKANAGTKLEIPDNAVLENKDINGPEDL 470
>UGPA_ASTME (Q9LKG7) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 471 Score = 125 bits (315), Expect = 5e-29 Identities = 63/93 (67%), Positives = 73/93 (78%) Frame = -1 Query: 526 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVL 347 +G VIRN AR P NPSIELGPEFKKV+NFL RFKSIPSIVELDSLK +L Sbjct: 379 NGSVIRNKARTNPENPSIELGPEFKKVSNFLGRFKSIPSIVELDSLKVVGDVWFGTGVIL 438 Query: 346 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 248 KG V+I AK+GVK+EIPDGAV+ NK+INGP+D+ Sbjct: 439 KGKVSIVAKSGVKVEIPDGAVIANKEINGPKDL 471
>UGPA_PYRPY (O64459) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 471 Score = 124 bits (310), Expect = 2e-28 Identities = 62/93 (66%), Positives = 72/93 (77%) Frame = -1 Query: 526 DGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVL 347 DG+V RN AR P NP+IELGPEFKKV ++L+RFKSIPSI+EL+SLK VL Sbjct: 379 DGFVTRNSARKNPENPTIELGPEFKKVGSYLSRFKSIPSILELESLKVSGDVWFGAGVVL 438 Query: 346 KGNVTIAAKAGVKLEIPDGAVLENKDINGPEDI 248 KG VTI AK+GVKLEIPD AV+ NKDINGPED+ Sbjct: 439 KGKVTITAKSGVKLEIPDNAVIANKDINGPEDL 471
>UGPA_DICDI (P08800) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 511 Score = 68.6 bits (166), Expect = 1e-11 Identities = 37/88 (42%), Positives = 49/88 (55%) Frame = -1 Query: 523 GYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLK 344 G V N R P ++LG EF V+++ RFKSIP ++ELD L LK Sbjct: 417 GQVKLNSKREGQDVPLVKLGEEFSTVSDYEKRFKSIPDLLELDHLTVSGDVYFGSRITLK 476 Query: 343 GNVTIAAKAGVKLEIPDGAVLENKDING 260 G V I A G +++IPDG VLENK ++G Sbjct: 477 GTVIIVANHGERVDIPDGVVLENKVLSG 504
>UGPA2_MOUSE (Q91ZJ5) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 68.2 bits (165), Expect = 1e-11 Identities = 36/88 (40%), Positives = 51/88 (57%) Frame = -1 Query: 523 GYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLK 344 G + + R P+ P ++LG F KV ++L RF+SIP ++ELD L LK Sbjct: 413 GSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLK 472 Query: 343 GNVTIAAKAGVKLEIPDGAVLENKDING 260 G V I A G +++IP GAVLENK ++G Sbjct: 473 GTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA2_HUMAN (Q16851) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 68.2 bits (165), Expect = 1e-11 Identities = 36/88 (40%), Positives = 51/88 (57%) Frame = -1 Query: 523 GYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLK 344 G + + R P+ P ++LG F KV ++L RF+SIP ++ELD L LK Sbjct: 413 GSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLK 472 Query: 343 GNVTIAAKAGVKLEIPDGAVLENKDING 260 G V I A G +++IP GAVLENK ++G Sbjct: 473 GTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA2_BOVIN (Q07130) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 68.2 bits (165), Expect = 1e-11 Identities = 36/88 (40%), Positives = 51/88 (57%) Frame = -1 Query: 523 GYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLK 344 G + + R P+ P ++LG F KV ++L RF+SIP ++ELD L LK Sbjct: 413 GSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLK 472 Query: 343 GNVTIAAKAGVKLEIPDGAVLENKDING 260 G V I A G +++IP GAVLENK ++G Sbjct: 473 GTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA1_HUMAN (Q07131) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 507 Score = 68.2 bits (165), Expect = 1e-11 Identities = 36/88 (40%), Positives = 51/88 (57%) Frame = -1 Query: 523 GYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLK 344 G + + R P+ P ++LG F KV ++L RF+SIP ++ELD L LK Sbjct: 413 GSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLK 472 Query: 343 GNVTIAAKAGVKLEIPDGAVLENKDING 260 G V I A G +++IP GAVLENK ++G Sbjct: 473 GTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA1_CRIGR (O35156) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 507 Score = 68.2 bits (165), Expect = 1e-11 Identities = 36/88 (40%), Positives = 51/88 (57%) Frame = -1 Query: 523 GYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLK 344 G + + R P+ P ++LG F KV ++L RF+SIP ++ELD L LK Sbjct: 413 GSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLK 472 Query: 343 GNVTIAAKAGVKLEIPDGAVLENKDING 260 G V I A G +++IP GAVLENK ++G Sbjct: 473 GTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA1_SCHPO (P78811) Probable UTP--glucose-1-phosphate uridylyltransferase (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 506 Score = 67.0 bits (162), Expect = 3e-11 Identities = 38/88 (43%), Positives = 48/88 (54%) Frame = -1 Query: 523 GYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLK 344 G V NP R + P ++LG FKKVA+F A SIP I+ELD L LK Sbjct: 412 GQVEMNPRRFGGTAPLVKLGAHFKKVADFSAHIPSIPKILELDHLTITGDVNIGRNVTLK 471 Query: 343 GNVTIAAKAGVKLEIPDGAVLENKDING 260 G V I A +++IP+G+VLEN I G Sbjct: 472 GTVIIVASDANRIDIPNGSVLENCVITG 499
>UGPA2_PIG (P79303) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 66.6 bits (161), Expect = 4e-11 Identities = 35/88 (39%), Positives = 50/88 (56%) Frame = -1 Query: 523 GYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLK 344 G + + R P+ P ++LG F KV ++L RF+SIP ++ELD L LK Sbjct: 413 GSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLK 472 Query: 343 GNVTIAAKAGVKLEIPDGAVLENKDING 260 G V I G +++IP GAVLENK ++G Sbjct: 473 GTVIIIXNHGDRIDIPPGAVLENKIVSG 500
>UGPA1_YEAST (P32861) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 499 Score = 65.5 bits (158), Expect = 9e-11 Identities = 36/83 (43%), Positives = 47/83 (56%) Frame = -1 Query: 508 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 329 +P+R P NP I+LG FKKV+ F AR IP IVELD L L+G V I Sbjct: 411 DPSRFGP-NPLIKLGSHFKKVSGFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVII 469 Query: 328 AAKAGVKLEIPDGAVLENKDING 260 G K++IP+G++LEN + G Sbjct: 470 VCSDGHKIDIPNGSILENVVVTG 492
>UGPA2_SCHPO (O59819) Probable UTP--glucose-1-phosphate uridylyltransferase (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 499 Score = 46.2 bits (108), Expect = 5e-05 Identities = 26/74 (35%), Positives = 35/74 (47%) Frame = -1 Query: 481 PSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGVKLE 302 P + + EFK +A R +PS+ +L SL +LKGN+ I A L Sbjct: 419 PVVRMSNEFKDIAELFCRIPYMPSMKDLVSLSISGNVYFGRNVILKGNIVIVASENTILC 478 Query: 301 IPDGAVLENKDING 260 IP AVLEN + G Sbjct: 479 IPSNAVLENCVVTG 492
>UGPA2_YEAST (P38709) Probable UTP--glucose-1-phosphate uridylyltransferase (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 493 Score = 46.2 bits (108), Expect = 5e-05 Identities = 26/72 (36%), Positives = 34/72 (47%) Frame = -1 Query: 481 PSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGVKLE 302 PSI+LG EF F IP+I+EL+ L LKG V I + Sbjct: 410 PSIDLGDEFATYETFKIGVPDIPNILELEHLTVMGNVFFGRNITLKGTVIIICDENDVIT 469 Query: 301 IPDGAVLENKDI 266 +PDG++LEN I Sbjct: 470 VPDGSILENVTI 481
>SRC8_CHICK (Q01406) Src substrate protein p85 (p80) (Cortactin)| Length = 563 Score = 30.8 bits (68), Expect = 2.4 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Frame = +2 Query: 203 WGCEKVGGQAGERHSNILWAVDVLVLKHRSVWDLQLD----SSLGGDGHVALEYDSRAKR 370 WG + V G + H NI + + +H+++ + +L+ +S G G +E D K Sbjct: 48 WGAKTVKGSGHQEHINIHQLRENVFQEHQTIKEKELETGPKASHGYGGKFGVEQDRMDKS 107 Query: 371 DITRDLQAVKLDDAGDRLETGKEVGNLFELRT 466 + + Q+ KL ++++ K G F ++T Sbjct: 108 AVGHEYQS-KLSKHCSQVDSVKGFGGKFGVQT 138
>RL2_THEMA (P38510) 50S ribosomal protein L2| Length = 276 Score = 30.4 bits (67), Expect = 3.1 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Frame = +3 Query: 75 CQWTARRGLQLLCNRAPAGQHPSRMHTKNYRTVNPA-KEDRK--VSGDARR--WAGRRVN 239 CQ A+ G L R P+G+ ++H K Y TV ED K V G A R W GRR + Sbjct: 163 CQIMAKEGNYALL-RMPSGEL-RKVHIKCYATVGVVGNEDHKNEVHGKAGRVRWLGRRPH 220 Query: 240 VTQISSGPL 266 V ++ P+ Sbjct: 221 VRGVAMNPV 229
>REF2P_DROSI (Q24629) Protein ref(2)P (Refractory to sigma P)| Length = 599 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/72 (25%), Positives = 32/72 (44%) Frame = +3 Query: 81 WTARRGLQLLCNRAPAGQHPSRMHTKNYRTVNPAKEDRKVSGDARRWAGRRVNVTQISSG 260 W GL C R G P + ++ PA++ R+ ARR AG ++ + Sbjct: 180 WFTGPGLGRRCGRRSRGHCPFQEASQPAPAAEPARDSRRERRHARRHAGVLSQFVEMMTN 239 Query: 261 PLMSLFSSTAPS 296 ++ ++TAP+ Sbjct: 240 LPLNTTTATAPA 251
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = -3 Query: 347 QGQRDHRRQGWSQVGDPRRSGA*EQGHQRPRGYLSDVHPPARPPSR 210 QG +D G + G PRR+G+ E+G R G + PP R SR Sbjct: 903 QGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERI-PPRRAGSR 947
>Y564_TREPA (O83575) Hypothetical protein TP0564| Length = 678 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +3 Query: 60 QEERKCQWTARRGLQL-LCNRAPAGQH-PSRMHTK-NYRTVNPAKEDRKVSGDARRWAGR 230 QE C + RGL L L + P +H +R H + + + A++ ++S D+R + G Sbjct: 484 QEITACYRISERGLTLSLHSPLPIPRHIRARTHARLSTAEIQKAQDHLQISMDSRSYFGG 543 Query: 231 RVNVTQISS 257 R+NV ++ S Sbjct: 544 RINVLEVRS 552 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,676,301 Number of Sequences: 219361 Number of extensions: 1885674 Number of successful extensions: 5375 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 5035 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5373 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
