Clone Name | rbart29e10 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009444.1| Triticum aestivum clone wlmk8.pk0004.f6:fis, full insert mRNA sequence Length = 1858 Score = 105 bits (53), Expect = 1e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatg 342 ||||| || ||||||||||||||||| |||||||| |||||||| |||||||| || ||| Sbjct: 1548 gccacggcgggcatgtccttgagccagccgtcgagcggcttgccgatggagtagacgatg 1489 Query: 343 aatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggca 402 || || || |||||||||||||| ||| || || |||||||| ||||| || ||||| Sbjct: 1488 aagccgatctccctgagcttctcggcgtcgacgacgttgcggccgtcaaacacgaaggcg 1429 Query: 403 ggcttctgcatgctgtc 419 |||||||||||| |||| Sbjct: 1428 ggcttctgcatgttgtc 1412
>ref|XM_468764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1446 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 286 acagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaat 345 ||||||||||||||||||||||| | ||||| ||||||||||||||||| || |||||| Sbjct: 1439 acagcaggcatgtccttgagccaggcatcgagaggcttgccaatggagtagacgatgaat 1380 Query: 346 ccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggc 405 ||||| ||||| ||||||||| |||||| || ||||| || || || || || || ||| Sbjct: 1379 ccaatctccctcagcttctcagcgtcaaccacgttgcgcccgtcgaacacgaacgccggc 1320 Query: 406 ttctgcat 413 |||||||| Sbjct: 1319 ttctgcat 1312
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 286 acagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaat 345 ||||||||||||||||||||||| | ||||| ||||||||||||||||| || |||||| Sbjct: 17588488 acagcaggcatgtccttgagccaggcatcgagaggcttgccaatggagtagacgatgaat 17588429 Query: 346 ccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggc 405 ||||| ||||| ||||||||| |||||| || ||||| || || || || || || ||| Sbjct: 17588428 ccaatctccctcagcttctcagcgtcaaccacgttgcgcccgtcgaacacgaacgccggc 17588369 Query: 406 ttctgcat 413 |||||||| Sbjct: 17588368 ttctgcat 17588361 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatg 342 ||||| || ||||||||||||||||| ||||||| |||||||| |||||||| || ||| Sbjct: 31014052 gccacggcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatg 31013993 Query: 343 aatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggca 402 || || || |||||||||||||| ||| || || |||||||| || || || || || Sbjct: 31013992 aagccgatctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgcc 31013933 Query: 403 ggcttctgcatgctgtc 419 |||||||||||| |||| Sbjct: 31013932 ggcttctgcatgttgtc 31013916
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Plus Query: 286 acagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaat 345 ||||||||||||||||||||||| | ||||| ||||||||||||||||| || |||||| Sbjct: 66589 acagcaggcatgtccttgagccaggcatcgagaggcttgccaatggagtagacgatgaat 66648 Query: 346 ccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggc 405 ||||| ||||| ||||||||| |||||| || ||||| || || || || || || ||| Sbjct: 66649 ccaatctccctcagcttctcagcgtcaaccacgttgcgcccgtcgaacacgaacgccggc 66708 Query: 406 ttctgcat 413 |||||||| Sbjct: 66709 ttctgcat 66716
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 103 bits (52), Expect = 5e-19 Identities = 109/128 (85%) Strand = Plus / Minus Query: 286 acagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaat 345 ||||||||||||||||||||||| | ||||| ||||||||||||||||| || |||||| Sbjct: 17582029 acagcaggcatgtccttgagccaggcatcgagaggcttgccaatggagtagacgatgaat 17581970 Query: 346 ccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggc 405 ||||| ||||| ||||||||| |||||| || ||||| || || || || || || ||| Sbjct: 17581969 ccaatctccctcagcttctcagcgtcaaccacgttgcgcccgtcgaacacgaacgccggc 17581910 Query: 406 ttctgcat 413 |||||||| Sbjct: 17581909 ttctgcat 17581902 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatg 342 ||||| || ||||||||||||||||| ||||||| |||||||| |||||||| || ||| Sbjct: 31104575 gccacggcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatg 31104516 Query: 343 aatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggca 402 || || || |||||||||||||| ||| || || |||||||| || || || || || Sbjct: 31104515 aagccgatctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgcc 31104456 Query: 403 ggcttctgcatgctgtc 419 |||||||||||| |||| Sbjct: 31104455 ggcttctgcatgttgtc 31104439
>ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.2 mRNA, complete cds Length = 1790 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1496 gcaggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaacca 1437 Query: 349 atttccctgagctt 362 || ||||| ||||| Sbjct: 1436 atctcccttagctt 1423
>ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.1 mRNA, complete cds Length = 1793 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1499 gcaggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaacca 1440 Query: 349 atttccctgagctt 362 || ||||| ||||| Sbjct: 1439 atctcccttagctt 1426
>gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10_6 mRNA, complete cds Length = 1793 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1499 gcaggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaacca 1440 Query: 349 atttccctgagctt 362 || ||||| ||||| Sbjct: 1439 atctcccttagctt 1426
>gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, complete sequence Length = 1746 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1499 gcaggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaacca 1440 Query: 349 atttccctgagctt 362 || ||||| ||||| Sbjct: 1439 atctcccttagctt 1426
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| Sbjct: 17026 gcaggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaacca 17085 Query: 349 atttccctgagctt 362 || ||||| ||||| Sbjct: 17086 atctcccttagctt 17099
>gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complete cds Length = 1486 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1446 gcaggcatgtccttgagccagtcgtcgagaggcttaccaatggagtaaacaatgaaacca 1387 Query: 349 atttccctgagctt 362 || ||||| ||||| Sbjct: 1386 atctcccttagctt 1373
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 89.7 bits (45), Expect = 7e-15 Identities = 108/129 (83%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 ||||||||||||||||| | || || |||||||| |||||||| || ||||| ||||| Sbjct: 14934425 ggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaacccaatc 14934366 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 |||||||||||||| || || |||||||| |||||||| || || |||||||||||| Sbjct: 14934365 tccctgagcttctcggcatcgaccacattgcgcccatcaaagacgaatgcaggcttctgc 14934306 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 14934305 atgttgtca 14934297 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 |||||||| |||||||| | || || |||||||| || ||||| |||||||| ||||| Sbjct: 14940301 ggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagccaatc 14940242 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 ||||||||||||||| || || |||||||| ||||| || ||||| ||||| |||||| Sbjct: 14940241 tccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggtttctgc 14940182 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 14940181 atgttgtca 14940173
>dbj|AK104003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H11, full insert sequence Length = 1852 Score = 89.7 bits (45), Expect = 7e-15 Identities = 108/129 (83%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 ||||||||||||||||| | || || |||||||| |||||||| || ||||| ||||| Sbjct: 1550 ggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaacccaatc 1491 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 |||||||||||||| || || |||||||| |||||||| || || |||||||||||| Sbjct: 1490 tccctgagcttctcggcatcgaccacattgcgcccatcaaagacgaatgcaggcttctgc 1431 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 1430 atgttgtca 1422
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 89.7 bits (45), Expect = 7e-15 Identities = 108/129 (83%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 ||||||||||||||||| | || || |||||||| |||||||| || ||||| ||||| Sbjct: 14888708 ggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaacccaatc 14888649 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 |||||||||||||| || || |||||||| |||||||| || || |||||||||||| Sbjct: 14888648 tccctgagcttctcggcatcgaccacattgcgcccatcaaagacgaatgcaggcttctgc 14888589 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 14888588 atgttgtca 14888580 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 |||||||| |||||||| | || || |||||||| || ||||| |||||||| ||||| Sbjct: 14894584 ggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagccaatc 14894525 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 ||||||||||||||| || || |||||||| ||||| || ||||| ||||| |||||| Sbjct: 14894524 tccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggtttctgc 14894465 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 14894464 atgttgtca 14894456
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 89.7 bits (45), Expect = 7e-15 Identities = 108/129 (83%) Strand = Plus / Plus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 ||||||||||||||||| | || || |||||||| |||||||| || ||||| ||||| Sbjct: 147422 ggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaacccaatc 147481 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 |||||||||||||| || || |||||||| |||||||| || || |||||||||||| Sbjct: 147482 tccctgagcttctcggcatcgaccacattgcgcccatcaaagacgaatgcaggcttctgc 147541 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 147542 atgttgtca 147550 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 |||||||| |||||||| | || || |||||||| || ||||| |||||||| ||||| Sbjct: 141546 ggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagccaatc 141605 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 ||||||||||||||| || || |||||||| ||||| || ||||| ||||| |||||| Sbjct: 141606 tccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggtttctgc 141665 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 141666 atgttgtca 141674
>gb|AF053973.1| Populus tremula x Populus tremuloides UDP-glucose dehydrogenase gene (ugdh), complete cds Length = 1824 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| | || |||||||| ||||||||||| |||||||| ||| Sbjct: 1513 gcaggcatgtccttgagccatgcatccagtggcttaccaatggagtacacaatgaaacca 1454 Query: 349 atttccctgagctt 362 || ||||||||||| Sbjct: 1453 atctccctgagctt 1440
>ref|XM_469834.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2058 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatg 342 ||||| || ||||||||||||||||| ||||||| |||||||| |||||||| || ||| Sbjct: 1646 gccacggcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatg 1587 Query: 343 aatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggca 402 || || || |||||||||||||| ||| || || |||||||| || || || || || Sbjct: 1586 aagccgatctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgcc 1527 Query: 403 ggcttctgcatgctgtc 419 |||||||||||| |||| Sbjct: 1526 ggcttctgcatgttgtc 1510
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 283 gccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatg 342 ||||| || ||||||||||||||||| ||||||| |||||||| |||||||| || ||| Sbjct: 82012 gccacggcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatg 82071 Query: 343 aatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggca 402 || || || |||||||||||||| ||| || || |||||||| || || || || || Sbjct: 82072 aagccgatctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgcc 82131 Query: 403 ggcttctgcatgctgtc 419 |||||||||||| |||| Sbjct: 82132 ggcttctgcatgttgtc 82148
>dbj|AK105768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E05, full insert sequence Length = 1865 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 ||||||||||||||||| | || || |||||||| |||||||| || ||||| ||||| Sbjct: 1550 ggcatgtccttgagccaggcatcaagcggcttgccgatggagtagacgatgaacccaatc 1491 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 ||||||||| |||| || || |||||||| |||||||| || || |||||||||||| Sbjct: 1490 tccctgagcctctcggcatcgaccacattgcgcccatcaaagacgaatgcaggcttctgc 1431 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 1430 atgttgtca 1422
>dbj|AK103919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A09, full insert sequence Length = 1774 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 |||||||| |||||||| | || || |||||||| || ||||| |||||||| ||||| Sbjct: 1536 ggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagccaatc 1477 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 ||||||||||||||| || || |||||||| ||||| || ||||| ||||| |||||| Sbjct: 1476 tccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggtttctgc 1417 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 1416 atgttgtca 1408
>dbj|AK099096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023C02, full insert sequence Length = 1824 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 |||||||| |||||||| | || || |||||||| || ||||| |||||||| ||||| Sbjct: 1665 ggcatgtctttgagccatgcatcaagcggcttgccgatagagtagacaatgaagccaatc 1606 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 ||||||||||||||| || || |||||||| ||||| || ||||| ||||| |||||| Sbjct: 1605 tccctgagcttctcaggatcgaccacattgcgcccatcgaagacaaatgcaggtttctgc 1546 Query: 412 atgctgtca 420 ||| ||||| Sbjct: 1545 atgttgtca 1537
>dbj|AK098880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F12, full insert sequence Length = 1946 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatg 342 ||||| || ||||||||||||||||| ||||||| |||||||| |||||||| || ||| Sbjct: 1551 gccacggcgggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatg 1492 Query: 343 aatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggca 402 || || || |||||||||||||| ||| || || |||||||| || || || || || Sbjct: 1491 aagccgatctccctgagcttctccgggtcgacgacgttgcggccgtcgaagacgaacgcc 1432 Query: 403 ggcttctgcatgctgtc 419 |||||||||||| |||| Sbjct: 1431 ggcttctgcatgttgtc 1415
>gb|BT016824.1| Zea mays clone Contig657 mRNA sequence Length = 1951 Score = 79.8 bits (40), Expect = 7e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 292 ggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaatt 351 ||||||||||||||||| ||||||| |||||||| |||||||| || ||||| || || Sbjct: 1599 ggcatgtccttgagccaggcgtcgagcggcttgccgatggagtagacgatgaagccgatc 1540 Query: 352 tccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctgc 411 ||||| |||||||| |||| || | |||||||| || || || ||||| ||||||||| Sbjct: 1539 tccctcagcttctcggagtcgacgatgttgcggccgtcgaagacgaaggcgggcttctgc 1480 Query: 412 atgctgtc 419 ||| |||| Sbjct: 1479 atgttgtc 1472
>gb|BT013548.1| Lycopersicon esculentum clone 132272F, mRNA sequence Length = 1845 Score = 79.8 bits (40), Expect = 7e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 279 ttaagccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaac 338 |||||| ||||| |||||||||||||||||| | || || ||||| ||||| ||||| || Sbjct: 1626 ttaagcaacagctggcatgtccttgagccaagcatccagaggcttaccaattgagtagac 1567 Query: 339 aatgaatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaa 398 || |||||||| ||||| |||||||| ||| |||||||| | |||||||| | ||| Sbjct: 1566 tataaatccaatctccctaagcttctccgcgtccacaacattcctaccatcaaatataaa 1507 Query: 399 ggcaggcttctgcatgctgtcata 422 ||||| || |||||||| ||||| Sbjct: 1506 agcaggtttttgcatgctatcata 1483
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence Length = 149005 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Minus Query: 278 tttaagccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaa 337 |||||||||| ||||||||||||||||||||| | || ||||| || |||||||| |||| Sbjct: 70835 tttaagccactgcaggcatgtccttgagccaagcatctagtggttttccaatggaataaa 70776 Query: 338 caatgaatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaa 397 | || || || || || || ||||| | || || |||||||| | |||||||| | || Sbjct: 70775 cgataaaaccgatgtctctcagctttttaacatcgacaacattccttccatcaaagataa 70716 Query: 398 aggcaggcttctgcatgctgtca 420 | ||||||||||||||| ||||| Sbjct: 70715 atgcaggcttctgcatgttgtca 70693
>gb|AY222335.1| Colocasia esculenta UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 77.8 bits (39), Expect = 3e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| | || |||||||| ||||||||||| |||||||| || Sbjct: 1433 gcaggcatgtccttgagccaggcatccagtggcttcccaatggagtagacaatgaaaccg 1374 Query: 349 atttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttc 408 || ||||| ||||| || | | || | ||||| |||||||| || ||||| |||||| Sbjct: 1373 atctccctcagcttatctacattcacgatgttgcgcccatcaaacacgaaggccggcttc 1314 Query: 409 tgcatgctgtcatag 423 |||||| |||||||| Sbjct: 1313 tgcatgttgtcatag 1299
>ref|NM_123294.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G39320 mRNA, complete cds Length = 1763 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||| Sbjct: 1506 gcaggcatgtccttgagccatgggtcaagtggcttaccaatggagtaaacaatgaaacca 1447 Query: 349 at 350 || Sbjct: 1446 at 1445
>gb|AY466400.1| Populus tomentosa UDP-glucose dehydrogenase (ugdh) mRNA, complete cds Length = 1819 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| | || |||||||| ||||||||||| |||||||| ||| Sbjct: 1513 gcaggcatgtccttgagccatgcatccagtggcttaccaatggagtacacaatgaaacca 1454 Query: 349 atttccctgagctt 362 || ||||| ||||| Sbjct: 1453 atctccctcagctt 1440
>gb|BT006380.1| Arabidopsis thaliana At5g39320 gene, complete cds Length = 1440 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||| Sbjct: 1430 gcaggcatgtccttgagccatgggtcaagtggcttaccaatggagtaaacaatgaaacca 1371 Query: 349 at 350 || Sbjct: 1370 at 1369
>dbj|AB009054.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL8 Length = 83450 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 289 gcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcca 348 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||| Sbjct: 311 gcaggcatgtccttgagccatgggtcaagtggcttaccaatggagtaaacaatgaaacca 252 Query: 349 at 350 || Sbjct: 251 at 250
>ref|NM_121553.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G15490 mRNA, complete cds Length = 1778 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 288 agcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcc 347 ||||||||||||||||||||| ||| | |||||| ||||||||||||||||| || || Sbjct: 1536 agcaggcatgtccttgagccactggtccaatggcttaccaatggagtaaacaataaaccc 1477 Query: 348 aatttccctgag 359 ||| |||||||| Sbjct: 1476 aatctccctgag 1465
>gb|BT015794.1| Arabidopsis thaliana At5g15490 mRNA, complete cds Length = 1443 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 288 agcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcc 347 ||||||||||||||||||||| ||| | |||||| ||||||||||||||||| || || Sbjct: 1434 agcaggcatgtccttgagccactggtccaatggcttaccaatggagtaaacaataaaccc 1375 Query: 348 aatttccctgag 359 ||| |||||||| Sbjct: 1374 aatctccctgag 1363
>gb|AY056200.1| Arabidopsis thaliana putative UDP-glucose dehydrogenase (At5g15490) mRNA, complete cds Length = 1793 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 288 agcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcc 347 ||||||||||||||||||||| ||| | |||||| ||||||||||||||||| || || Sbjct: 1536 agcaggcatgtccttgagccactggtccaatggcttaccaatggagtaaacaataaaccc 1477 Query: 348 aatttccctgag 359 ||| |||||||| Sbjct: 1476 aatctccctgag 1465
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project) Length = 90176 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 288 agcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatcc 347 ||||||||||||||||||||| ||| | |||||| ||||||||||||||||| || || Sbjct: 33659 agcaggcatgtccttgagccactggtccaatggcttaccaatggagtaaacaataaaccc 33718 Query: 348 aatttccctgag 359 ||| |||||||| Sbjct: 33719 aatctccctgag 33730
>gb|BT017136.1| Zea mays clone EL01N0365H08.c mRNA sequence Length = 1682 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 279 ttaagccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaac 338 |||||| || || ||||||||||| ||||| ||||||| |||||||| |||||||| || Sbjct: 1356 ttaagcgaccgcgggcatgtccttaagccaggcgtcgagcggcttgccgatggagtagac 1297 Query: 339 aatgaatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaa 398 ||||| || || ||||| |||||||| ||| || | |||||||| || || || || Sbjct: 1296 gatgaagccgatctccctcagcttctccgggtcgacgatgttgcggccgtcgaagacgaa 1237 Query: 399 ggcaggcttctgcatgctgtc 419 ||| |||||||||||| |||| Sbjct: 1236 ggcgggcttctgcatgttgtc 1216
>gb|AY103689.1| Zea mays PCO113568 mRNA sequence Length = 1967 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 279 ttaagccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaac 338 |||||| || || ||||||||||| ||||| ||||||| |||||||| |||||||| || Sbjct: 1615 ttaagcgaccgcgggcatgtccttaagccaggcgtcgagcggcttgccgatggagtagac 1556 Query: 339 aatgaatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaa 398 ||||| || || ||||| |||||||| ||| || | |||||||| || || || || Sbjct: 1555 gatgaagccgatctccctcagcttctccgggtcgacgatgttgcggccgtcgaagacgaa 1496 Query: 399 ggcaggcttctgcatgctgtc 419 ||| |||||||||||| |||| Sbjct: 1495 ggcgggcttctgcatgttgtc 1475
>gb|U53418.1|GMU53418 Glycine max UDP-glucose dehydrogenase mRNA, complete cds Length = 1714 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 278 tttaagccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaa 337 |||| ||||||||||||||||| |||||||| ||| |||||||| ||||| ||||||| Sbjct: 1456 tttatgccacagcaggcatgtctttgagccatgggtccagtggcttaccaattgagtaaa 1397 Query: 338 caatgaatccaat 350 | ||||| ||||| Sbjct: 1396 ctatgaagccaat 1384
>gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete sequence Length = 106790 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Minus Query: 278 tttaagccacagcaggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaa 337 |||| |||||||| ||||| ||||||||||| | || | ||| || ||||| ||||||| Sbjct: 73357 tttatgccacagctggcatatccttgagccatgcatccaatggttttccaattgagtaaa 73298 Query: 338 caatgaatccaatttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaa 397 ||||||| ||||| || | ||||||||| || ||||| || | ||||||||||||| Sbjct: 73297 caatgaaaccaatctcacgtagcttctcagcatcgacaacgttccttccatcaaaaacaa 73238 Query: 398 a 398 | Sbjct: 73237 a 73237
>gb|AY619948.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 1 mRNA, complete cds Length = 1823 Score = 48.1 bits (24), Expect = 0.023 Identities = 105/132 (79%) Strand = Plus / Minus Query: 291 aggcatgtccttgagccaaccgtcgagtggcttgccaatggagtaaacaatgaatccaat 350 |||||||||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct: 1519 aggcatgtccttgagccaggcatccagcggcttaccaattgagtagactataaacccgat 1460 Query: 351 ttccctgagcttctcaaagtcaacaacattgcggccatcaaaaacaaaggcaggcttctg 410 || || |||||||| ||||| ||||| || | |||||||||| ||| || || || || Sbjct: 1459 ctctctaagcttctccaagtccacaacgttcctaccatcaaaaataaaagcgggtttttg 1400 Query: 411 catgctgtcata 422 |||| ||||||| Sbjct: 1399 catgttgtcata 1388
>ref|NM_102419.3| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT1G26570 mRNA, complete cds Length = 1712 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagcca 308 |||||||||||||| ||||||||||| Sbjct: 1561 gccacagcaggcatatccttgagcca 1536
>emb|CR450793.12| Zebrafish DNA sequence from clone DKEY-48M5 in linkage group 10, complete sequence Length = 130542 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 392 aaacaaaggcaggcttctgcatgctg 417 ||||||||||||||| |||||||||| Sbjct: 109211 aaacaaaggcaggctgctgcatgctg 109186
>gb|AY143922.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds Length = 1446 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagcca 308 |||||||||||||| ||||||||||| Sbjct: 1442 gccacagcaggcatatccttgagcca 1417
>emb|BX927315.10| Zebrafish DNA sequence from clone CH211-215B16 in linkage group 2, complete sequence Length = 172122 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 392 aaacaaaggcaggcttctgcatgctg 417 ||||||||||||||| |||||||||| Sbjct: 62173 aaacaaaggcaggctgctgcatgctg 62198
>gb|AY070758.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds Length = 1707 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagcca 308 |||||||||||||| ||||||||||| Sbjct: 1560 gccacagcaggcatatccttgagcca 1535
>emb|BX323832.7| Zebrafish DNA sequence from clone CH211-261E18, complete sequence Length = 115449 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 392 aaacaaaggcaggcttctgcatgctg 417 ||||||||||||||| |||||||||| Sbjct: 34746 aaacaaaggcaggctgctgcatgctg 34721
>emb|BX816266.1|CNS0ABUF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 353 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagcca 308 |||||||||||||| ||||||||||| Sbjct: 202 gccacagcaggcatatccttgagcca 177
>emb|BX817654.1|CNS0AAWE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL35ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 647 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagcca 308 |||||||||||||| ||||||||||| Sbjct: 496 gccacagcaggcatatccttgagcca 471
>emb|BX814676.1|CNS0AAJL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1649 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagcca 308 |||||||||||||| ||||||||||| Sbjct: 1547 gccacagcaggcatatccttgagcca 1522
>gb|AY084436.1| Arabidopsis thaliana clone 108221 mRNA, complete sequence Length = 1706 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 283 gccacagcaggcatgtccttgagcca 308 |||||||||||||| ||||||||||| Sbjct: 1559 gccacagcaggcatatccttgagcca 1534
>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete sequence Length = 89473 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 283 gccacagcaggcatgtccttgagcca 308 |||||||||||||| ||||||||||| Sbjct: 16201 gccacagcaggcatatccttgagcca 16226
>emb|BX842561.12| Mouse DNA sequence from clone RP23-440P8 on chromosome 4, complete sequence Length = 112732 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 aactataaagagaaataacaa 209 ||||||||||||||||||||| Sbjct: 110530 aactataaagagaaataacaa 110550
>gb|AC154436.2| Mus musculus BAC clone RP24-192B24 from chromosome 14, complete sequence Length = 180476 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ataaacagcaactataaagagaaat 204 |||||||||||||||||||| |||| Sbjct: 53185 ataaacagcaactataaagacaaat 53209
>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete sequence Length = 224168 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 ataaacagcaactataaagagaaat 204 |||||||||||||||||||| |||| Sbjct: 196513 ataaacagcaactataaagacaaat 196537
>emb|AL731712.6| Mouse DNA sequence from clone RP23-100M24 on chromosome 2, complete sequence Length = 215428 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 22 taacatgataaaggtgcaacaacagacat 50 ||||||||||||||| ||| ||||||||| Sbjct: 34665 taacatgataaaggtacaaaaacagacat 34693
>emb|AL671872.10| Mouse DNA sequence from clone RP23-151N17 on chromosome 4, complete sequence Length = 188386 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 aactataaagagaaataacaa 209 ||||||||||||||||||||| Sbjct: 149018 aactataaagagaaataacaa 149038
>gb|AC123703.8| Mus musculus chromosome 3, clone RP23-345N18, complete sequence Length = 197442 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 agagaaataacaagctgaat 216 |||||||||||||||||||| Sbjct: 121813 agagaaataacaagctgaat 121832
>ref|XM_534845.2| PREDICTED: Canis familiaris similar to CG6004-PB (LOC477650), mRNA Length = 5410 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 aaaaacaaaggcaggcttct 409 |||||||||||||||||||| Sbjct: 3969 aaaaacaaaggcaggcttct 3988
>gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, complete sequence Length = 161803 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 atttaagccacagcaggcat 296 |||||||||||||||||||| Sbjct: 108211 atttaagccacagcaggcat 108230
>gb|AC160015.2| Mus musculus BAC clone RP23-433E2 from chromosome 9, complete sequence Length = 209970 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 accatgccattctaacactg 119 |||||||||||||||||||| Sbjct: 63706 accatgccattctaacactg 63687
>gb|AF249813.1|AF249813 Janolus cristatus cytochrome oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 599 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ctcctccctctatcagagtt 275 |||||||||||||||||||| Sbjct: 295 ctcctccctctatcagagtt 276
>gb|AC112482.4| Homo sapiens 3 BAC RP11-305F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182916 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 ccctgagcttctcaaagtca 372 |||||||||||||||||||| Sbjct: 98980 ccctgagcttctcaaagtca 98999
>gb|AC105328.13| Homo sapiens chromosome 8, clone RP11-932B15, complete sequence Length = 128785 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cagagtttatttaagccaca 288 |||||||||||||||||||| Sbjct: 52479 cagagtttatttaagccaca 52460
>dbj|AP003473.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1935H12 Length = 148498 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 cagagtttatttaagccaca 288 |||||||||||||||||||| Sbjct: 104075 cagagtttatttaagccaca 104094
>emb|CR450845.14| Zebrafish DNA sequence from clone DKEY-63K7 in linkage group 2, complete sequence Length = 232604 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 aacaaaggcaggcttctgcatgct 416 |||||||||||||| ||||||||| Sbjct: 165096 aacaaaggcaggctgctgcatgct 165073
>emb|CT025676.10| Mouse DNA sequence from clone RP24-372B7 on chromosome 9, complete sequence Length = 174177 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 accatgccattctaacactg 119 |||||||||||||||||||| Sbjct: 56814 accatgccattctaacactg 56833
>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete sequence Length = 227692 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 tggagtaaacaatgaatcca 348 |||||||||||||||||||| Sbjct: 82651 tggagtaaacaatgaatcca 82632
>gb|AC165281.2| Mus musculus BAC clone RP24-502H6 from chromosome 13, complete sequence Length = 225816 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 caatggagtaaacaatgaat 345 |||||||||||||||||||| Sbjct: 63386 caatggagtaaacaatgaat 63367
>dbj|AP005356.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1198A4, complete sequence Length = 159758 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 cagagtttatttaagccaca 288 |||||||||||||||||||| Sbjct: 54746 cagagtttatttaagccaca 54765 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,289,756 Number of Sequences: 3902068 Number of extensions: 4289756 Number of successful extensions: 76052 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 75772 Number of HSP's gapped (non-prelim): 272 length of query: 423 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 401 effective length of database: 17,147,199,772 effective search space: 6876027108572 effective search space used: 6876027108572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)