ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart29e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK108370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
2gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 68 3e-08
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
4ref|XM_511001.1| PREDICTED: Pan troglodytes LOC454130 (LOC454130... 54 4e-04
5gb|AF087845.1| Homo sapiens EVORF mRNA, complete cds 54 4e-04
6gb|BC005152.2| Homo sapiens gene trap locus 3 (mouse), mRNA (cDN... 54 4e-04
7emb|CR626042.1| full-length cDNA clone CS0DK005YI19 of HeLa cell... 54 4e-04
8emb|CR623489.1| full-length cDNA clone CS0DI039YA01 of Placenta ... 54 4e-04
9emb|CR613931.1| full-length cDNA clone CS0DF025YN05 of Fetal bra... 54 4e-04
10emb|CR612011.1| full-length cDNA clone CS0DC021YB15 of Neuroblas... 54 4e-04
11emb|CR604557.1| full-length cDNA clone CS0DD004YF09 of Neuroblas... 54 4e-04
12emb|CR596631.1| full-length cDNA clone CS0DL002YE08 of B cells (... 54 4e-04
13emb|CR595445.1| full-length cDNA clone CS0DC002YM09 of Neuroblas... 54 4e-04
14ref|NM_013242.2| Homo sapiens gene trap locus 3 (mouse) (GTL3), ... 54 4e-04
15gb|AC026771.6| Homo sapiens chromosome 16 clone CTB-134F13, comp... 54 4e-04
16dbj|AK027099.1| Homo sapiens cDNA: FLJ23446 fis, clone HSI02289,... 54 4e-04
17gb|AF093680.1|AF093680 Homo sapiens transcription factor IIB mRN... 54 4e-04
18ref|NM_008187.1| Mus musculus gene trap locus 3 (Gtl3), mRNA 50 0.006
19gb|BC092397.1| Mus musculus cDNA clone IMAGE:5705678, **** WARNI... 50 0.006
20dbj|AK172603.1| Mus musculus activated spleen cDNA, RIKEN full-l... 50 0.006
21dbj|AK088713.1| Mus musculus 2 days neonate thymus thymic cells ... 50 0.006
22dbj|AK011217.1| Mus musculus 10 days embryo whole body cDNA, RIK... 50 0.006
23gb|AC102555.11| Mus musculus chromosome 8, clone RP23-163N19, co... 50 0.006
24gb|AC165414.9| Mus musculus chromosome 8, clone RP23-424A21, com... 50 0.006
25emb|Z54179.1|MMEVORF M.musculus mRNA (evolutionary conserved tra... 50 0.006
26gb|AC129567.8| Mus musculus chromosome 8, clone RP23-50L10, comp... 42 1.5
27gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosom... 42 1.5
28gb|AC122206.4| Mus musculus BAC clone RP23-77G15 from 8, complet... 42 1.5
29gb|BC027216.1| Mus musculus angiopoietin 2, mRNA (cDNA clone MGC... 42 1.5
30ref|NM_007426.2| Mus musculus angiopoietin 2 (Angpt2), mRNA 42 1.5
31gb|BC034640.1| Homo sapiens cDNA clone IMAGE:4837390 42 1.5
32gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, comp... 42 1.5
33dbj|AK143974.1| Mus musculus adult male kidney cDNA, RIKEN full-... 42 1.5
34dbj|AK156132.1| Mus musculus activated spleen cDNA, RIKEN full-l... 42 1.5
35emb|CR385501.1| Gallus gallus finished cDNA, clone ChEST369i1 42 1.5
36dbj|AK019860.1| Mus musculus 11 days pregnant adult female ovary... 42 1.5
37dbj|AK048622.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 1.5
38ref|XM_344544.2| PREDICTED: Rattus norvegicus angiopoietin 2 (Ag... 42 1.5
39gb|AC105247.16| Homo sapiens chromosome 18, clone CTD-2545G7, co... 42 1.5
40gb|AC079384.26| Homo sapiens 12 BAC RP11-148B3 (Roswell Park Can... 42 1.5
41dbj|AP001120.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.5
42gb|AF004326.1|AF004326 Mus musculus angiopoietin-2 mRNA, complet... 42 1.5
43ref|NM_053318.1| Rattus norvegicus hemopexin (Hpx), mRNA 40 5.8
44gb|AC149645.4| Bos taurus BAC CH240-50L4 (Children's Hospital O... 40 5.8
45gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
46gb|AC092989.6| Homo sapiens 3 BAC RP11-237P21 (Roswell Park Canc... 40 5.8
47gb|AE014302.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 5.8
48emb|AL513547.16| Human DNA sequence from clone RP11-160E12 on ch... 40 5.8
49emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on ch... 40 5.8
50emb|AL353623.16| Human DNA sequence from clone RP11-376H15 on ch... 40 5.8
51emb|AL353752.6| Human DNA sequence from clone RP11-497K15 on chr... 40 5.8
52gb|AC175689.5| Otolemur garnetti, clone XX-8157A7, complete sequ... 40 5.8
53gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.8
54gb|AC120746.5| Rattus norvegicus BAC CH230-25H1 (Children's Hos... 40 5.8
55gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
56gb|DQ429961.1| Sorghum propinquum locus pSB1563 genomic sequence 40 5.8
57dbj|AK160186.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 5.8
58gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence 40 5.8
59dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
60gb|AC093171.3| Homo sapiens BAC clone RP11-742A14 from 2, comple... 40 5.8
61gb|BC091137.1| Rattus norvegicus hemopexin, mRNA (cDNA clone MGC... 40 5.8
62emb|AL929149.8| Mouse DNA sequence from clone RP23-93B24 on chro... 40 5.8
63emb|X68533.1|RNP618 R.norvegicus pseudogene for transfer RNA-Gln... 40 5.8
64gb|AY610052.1| Sus scrofa clone Clu_6033.scr.msk.p1.Contig1, mRN... 40 5.8
65dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 5.8
66emb|AL731676.5| Mouse DNA sequence from clone RP23-460B8 on chro... 40 5.8
67emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chr... 40 5.8
68emb|AL805953.5| Mouse DNA sequence from clone RP23-189N21 on chr... 40 5.8
69gb|M62642.1|RATHMPX Rat (clone pRHx1) hemopexin mRNA, complete cds 40 5.8 
>dbj|AK108370.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-D07, full
           insert sequence
          Length = 848

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 374 ttctggattggaaggtagagcttgaactcggccggcagctcctcttctgagtagaggcg 432
           ||||| || |||||||||||||||||||| |  ||||||||||| ||||||||||||||
Sbjct: 522 ttctgaataggaaggtagagcttgaactcaggtggcagctcctcctctgagtagaggcg 464
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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0094K23, complete sequence
          Length = 167482

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                
Query: 383    ggaaggtagagcttgaactcggccggcagctcctcttctgagtagaggcg 432
              |||||||||||||||||||| |  ||||||||||| ||||||||||||||
Sbjct: 102394 ggaaggtagagcttgaactcaggtggcagctcctcctctgagtagaggcg 102345
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                  
Query: 383      ggaaggtagagcttgaactcggccggcagctcctcttctgagtagaggcg 432
                |||||||||||||||||||| |  ||||||||||| ||||||||||||||
Sbjct: 19506987 ggaaggtagagcttgaactcaggtggcagctcctcctctgagtagaggcg 19506938
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>ref|XM_511001.1| PREDICTED: Pan troglodytes LOC454130 (LOC454130), mRNA
          Length = 1315

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 846 ttgaactctgccggcagctcatcttctgagtagag 812
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>gb|AF087845.1| Homo sapiens EVORF mRNA, complete cds
          Length = 880

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 802 ttgaactctgccggcagctcatcttctgagtagag 768
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>gb|BC005152.2| Homo sapiens gene trap locus 3 (mouse), mRNA (cDNA clone MGC:3336
           IMAGE:3528301), complete cds
          Length = 1277

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 791 ttgaactctgccggcagctcatcttctgagtagag 757
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>emb|CR626042.1| full-length cDNA clone CS0DK005YI19 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1181

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 742 ttgaactctgccggcagctcatcttctgagtagag 708
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>emb|CR623489.1| full-length cDNA clone CS0DI039YA01 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1571

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 395  ttgaactcggccggcagctcctcttctgagtagag 429
            |||||||| ||||||||||| ||||||||||||||
Sbjct: 1133 ttgaactctgccggcagctcatcttctgagtagag 1099
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>emb|CR613931.1| full-length cDNA clone CS0DF025YN05 of Fetal brain of Homo sapiens
            (human)
          Length = 1605

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 395  ttgaactcggccggcagctcctcttctgagtagag 429
            |||||||| ||||||||||| ||||||||||||||
Sbjct: 1149 ttgaactctgccggcagctcatcttctgagtagag 1115
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>emb|CR612011.1| full-length cDNA clone CS0DC021YB15 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1216

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 761 ttgaactctgccggcagctcatcttctgagtagag 727
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>emb|CR604557.1| full-length cDNA clone CS0DD004YF09 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 841

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 371 ttgaactctgccggcagctcatcttctgagtagag 337
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>emb|CR596631.1| full-length cDNA clone CS0DL002YE08 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 810

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 340 ttgaactctgccggcagctcatcttctgagtagag 306
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>emb|CR595445.1| full-length cDNA clone CS0DC002YM09 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1257

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 792 ttgaactctgccggcagctcatcttctgagtagag 758
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>ref|NM_013242.2| Homo sapiens gene trap locus 3 (mouse) (GTL3), mRNA
          Length = 1308

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 822 ttgaactctgccggcagctcatcttctgagtagag 788
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>gb|AC026771.6| Homo sapiens chromosome 16 clone CTB-134F13, complete sequence
          Length = 69808

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 395   ttgaactcggccggcagctcctcttctgagtagag 429
             |||||||| ||||||||||| ||||||||||||||
Sbjct: 61135 ttgaactctgccggcagctcatcttctgagtagag 61101
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>dbj|AK027099.1| Homo sapiens cDNA: FLJ23446 fis, clone HSI02289, highly similar to
           AF093680 Homo sapiens transcription factor IIB mRNA
          Length = 1257

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 743 ttgaactctgccggcagctcatcttctgagtagag 709
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>gb|AF093680.1|AF093680 Homo sapiens transcription factor IIB mRNA, complete cds
          Length = 1278

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 ttgaactcggccggcagctcctcttctgagtagag 429
           |||||||| ||||||||||| ||||||||||||||
Sbjct: 801 ttgaactctgccggcagctcatcttctgagtagag 767
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>ref|NM_008187.1| Mus musculus gene trap locus 3 (Gtl3), mRNA
          Length = 1217

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 389 tagagcttgaactcggccggcagctcctcttctgagtagag 429
           ||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 772 tagagtttgaactctgctggcagctcatcttctgagtagag 732
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>gb|BC092397.1| Mus musculus cDNA clone IMAGE:5705678, **** WARNING: chimeric clone
            ****
          Length = 4197

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 389  tagagcttgaactcggccggcagctcctcttctgagtagag 429
            ||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 3265 tagagtttgaactctgctggcagctcatcttctgagtagag 3225
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>dbj|AK172603.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830219A02 product:Transcription factor
            IIB homolog [Mus musculus], full insert sequence
          Length = 2559

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 389  tagagcttgaactcggccggcagctcctcttctgagtagag 429
            ||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 1659 tagagtttgaactctgctggcagctcatcttctgagtagag 1619
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>dbj|AK088713.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430024D22
           product:TRANSCRIPTION FACTOR IIB (SIMILAR TO MOUSE GLT3
           OR D. MALANOGASTER TRANSCRIPTION FACTOR IIB) homolog
           [Homo sapiens], full insert sequence
          Length = 1196

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 389 tagagcttgaactcggccggcagctcctcttctgagtagag 429
           ||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 753 tagagtttgaactctgctggcagctcatcttctgagtagag 713
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>dbj|AK011217.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2600014O15 product:TRANSCRIPTION
           FACTOR IIB (SIMILAR TO MOUSE GLT3 OR D. MALANOGASTER
           TRANSCRIPTION FACTOR IIB) homolog [Homo sapiens], full
           insert sequence
          Length = 1236

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 389 tagagcttgaactcggccggcagctcctcttctgagtagag 429
           ||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 793 tagagtttgaactctgctggcagctcatcttctgagtagag 753
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>gb|AC102555.11| Mus musculus chromosome 8, clone RP23-163N19, complete sequence
          Length = 196060

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 389   tagagcttgaactcggccggcagctcctcttctgagtagag 429
             ||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 41645 tagagtttgaactctgctggcagctcatcttctgagtagag 41685
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>gb|AC165414.9| Mus musculus chromosome 8, clone RP23-424A21, complete sequence
          Length = 192707

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 389    tagagcttgaactcggccggcagctcctcttctgagtagag 429
              ||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 115695 tagagtttgaactctgctggcagctcatcttctgagtagag 115735
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>emb|Z54179.1|MMEVORF M.musculus mRNA (evolutionary conserved transcript)
          Length = 1217

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 389 tagagcttgaactcggccggcagctcctcttctgagtagag 429
           ||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 772 tagagtttgaactctgctggcagctcatcttctgagtagag 732
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>gb|AC129567.8| Mus musculus chromosome 8, clone RP23-50L10, complete sequence
          Length = 228046

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 321    caagtcaggactcacgaccagtggc 345
              ||||||||||||||| |||||||||
Sbjct: 204419 caagtcaggactcaccaccagtggc 204443
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>gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosome 8, complete sequence
          Length = 154235

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    agaaaataaaacaaggcagaa 70
             |||||||||||||||||||||
Sbjct: 92469 agaaaataaaacaaggcagaa 92449
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>gb|AC122206.4| Mus musculus BAC clone RP23-77G15 from 8, complete sequence
          Length = 204149

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 321   caagtcaggactcacgaccagtggc 345
             ||||||||||||||| |||||||||
Sbjct: 23663 caagtcaggactcaccaccagtggc 23687
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>gb|BC027216.1| Mus musculus angiopoietin 2, mRNA (cDNA clone MGC:25292
            IMAGE:3494566), complete cds
          Length = 2471

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 321  caagtcaggactcacgaccagtggc 345
            ||||||||||||||| |||||||||
Sbjct: 1101 caagtcaggactcaccaccagtggc 1125
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>ref|NM_007426.2| Mus musculus angiopoietin 2 (Angpt2), mRNA
          Length = 2475

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 321  caagtcaggactcacgaccagtggc 345
            ||||||||||||||| |||||||||
Sbjct: 1137 caagtcaggactcaccaccagtggc 1161
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>gb|BC034640.1| Homo sapiens cDNA clone IMAGE:4837390
          Length = 3724

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 40   gtcttgtagaagaaaataaaa 60
            |||||||||||||||||||||
Sbjct: 1001 gtcttgtagaagaaaataaaa 1021
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>gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, complete sequence
          Length = 162351

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    gaagaaaataaaacaaggcagaagg 72
             ||||||||||||| |||||||||||
Sbjct: 46220 gaagaaaataaaagaaggcagaagg 46244
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>dbj|AK143974.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
            library, clone:F530010E22 product:angiopoietin 2, full
            insert sequence
          Length = 3550

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 321  caagtcaggactcacgaccagtggc 345
            ||||||||||||||| |||||||||
Sbjct: 1136 caagtcaggactcaccaccagtggc 1160
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>dbj|AK156132.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830008L22 product:angiopoietin 2, full
            insert sequence
          Length = 2462

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 321  caagtcaggactcacgaccagtggc 345
            ||||||||||||||| |||||||||
Sbjct: 1119 caagtcaggactcaccaccagtggc 1143
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>emb|CR385501.1| Gallus gallus finished cDNA, clone ChEST369i1
          Length = 865

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 7   aaaccaatccaaaaccaaata 27
           |||||||||||||||||||||
Sbjct: 771 aaaccaatccaaaaccaaata 751
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>dbj|AK019860.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA,
            RIKEN full-length enriched library, clone:5031400E18
            product:ANGIOPOIETIN-2 PRECURSOR, full insert sequence
          Length = 2475

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 321  caagtcaggactcacgaccagtggc 345
            ||||||||||||||| |||||||||
Sbjct: 1137 caagtcaggactcaccaccagtggc 1161
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>dbj|AK048622.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130089A05 product:ANGIOPOIETIN-2
            PRECURSOR, full insert sequence
          Length = 2443

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 321  caagtcaggactcacgaccagtggc 345
            ||||||||||||||| |||||||||
Sbjct: 1105 caagtcaggactcaccaccagtggc 1129
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>ref|XM_344544.2| PREDICTED: Rattus norvegicus angiopoietin 2 (Agpt2), mRNA
          Length = 3119

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 321  caagtcaggactcacgaccagtggc 345
            ||||||||||||||| |||||||||
Sbjct: 2340 caagtcaggactcaccaccagtggc 2364
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>gb|AC105247.16| Homo sapiens chromosome 18, clone CTD-2545G7, complete sequence
          Length = 165814

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    gagcatggtacaattagcaac 195
              |||||||||||||||||||||
Sbjct: 111741 gagcatggtacaattagcaac 111761
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>gb|AC079384.26| Homo sapiens 12 BAC RP11-148B3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180555

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 47    agaagaaaataaaacaaggca 67
             |||||||||||||||||||||
Sbjct: 23853 agaagaaaataaaacaaggca 23873
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>dbj|AP001120.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-677O4, complete
             sequence
          Length = 181123

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    gtcttgtagaagaaaataaaa 60
             |||||||||||||||||||||
Sbjct: 62051 gtcttgtagaagaaaataaaa 62031
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>gb|AF004326.1|AF004326 Mus musculus angiopoietin-2 mRNA, complete cds
          Length = 2424

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 321  caagtcaggactcacgaccagtggc 345
            ||||||||||||||| |||||||||
Sbjct: 1074 caagtcaggactcaccaccagtggc 1098
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>ref|NM_053318.1| Rattus norvegicus hemopexin (Hpx), mRNA
          Length = 1484

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  ccatgtcgcctgggctcctg 318
            ||||||||||||||||||||
Sbjct: 1195 ccatgtcgcctgggctcctg 1176
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>gb|AC149645.4| Bos taurus  BAC CH240-50L4 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 198061

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    ttgtagaagaaaataaaaca 62
             ||||||||||||||||||||
Sbjct: 21774 ttgtagaagaaaataaaaca 21755
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       gaaaataaaacaaggcagaa 70
                ||||||||||||||||||||
Sbjct: 12468033 gaaaataaaacaaggcagaa 12468014
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>gb|AC092989.6| Homo sapiens 3 BAC RP11-237P21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168492

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 298    tccatgtcgcctgggctcctgggc 321
              |||||||| |||||||||||||||
Sbjct: 122049 tccatgtctcctgggctcctgggc 122026
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>gb|AE014302.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 2
             of 3 of the complete sequence
          Length = 277196

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 36    tgttgtcttgtagaagaaaataaaacaa 63
             |||||| ||| |||||||||||||||||
Sbjct: 73396 tgttgtgttgcagaagaaaataaaacaa 73423
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>emb|AL513547.16| Human DNA sequence from clone RP11-160E12 on chromosome 6 Contains the
             5' end of a novel gene, a novel gene, a PHD zinc finger
             protein XAP135 (XAP135) and three CpG islands, complete
             sequence
          Length = 91814

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   gtcgcctgggctcctgggca 322
             ||||||||||||||||||||
Sbjct: 27126 gtcgcctgggctcctgggca 27145
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>emb|AL355807.11| Human DNA sequence from clone RP11-487A20 on chromosome 13 Contains the
             5' end of the ITGBL1 gene for integrin, beta-like 1 (with
             EGF-like repeat domains), complete sequence
          Length = 149143

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 36    tgttgtcttgtagaagaaaataaaacaa 63
             |||||| ||| |||||||||||||||||
Sbjct: 96290 tgttgtgttgcagaagaaaataaaacaa 96317
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>emb|AL353623.16| Human DNA sequence from clone RP11-376H15 on chromosome 13 Contains the
             5' end of a novel gene and a CpG island, complete sequence
          Length = 128538

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    agaagaaaataaaacaaggcagaa 70
             |||||||||||||||||| |||||
Sbjct: 41163 agaagaaaataaaacaagacagaa 41140
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>emb|AL353752.6| Human DNA sequence from clone RP11-497K15 on chromosome 9 Contains a
             NADH dehydrogenase (ubiquinone) 1 alpha (MLRQ) (NDUFA4)
             pseudogene, complete sequence
          Length = 177921

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   tcctcttctgagtagaggcg 432
             ||||||||||||||||||||
Sbjct: 12846 tcctcttctgagtagaggcg 12827
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>gb|AC175689.5| Otolemur garnetti, clone XX-8157A7, complete sequence
          Length = 40468

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   aacaaggcagaaggcttggc 78
            ||||||||||||||||||||
Sbjct: 6310 aacaaggcagaaggcttggc 6329
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>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
              from chromosome 3, complete sequence
          Length = 124550

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     gaaaataaaacaaggcagaa 70
              ||||||||||||||||||||
Sbjct: 119908 gaaaataaaacaaggcagaa 119927
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>gb|AC120746.5| Rattus norvegicus  BAC CH230-25H1 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 234610

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    ccatgtcgcctgggctcctg 318
              ||||||||||||||||||||
Sbjct: 171572 ccatgtcgcctgggctcctg 171553
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>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14,
              complete sequence
          Length = 132560

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     gaaaataaaacaaggcagaa 70
              ||||||||||||||||||||
Sbjct: 125715 gaaaataaaacaaggcagaa 125696
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>gb|DQ429961.1| Sorghum propinquum locus pSB1563 genomic sequence
          Length = 719

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 226 tggcgtacaaccattaaacgttct 249
           |||||||||||||| |||||||||
Sbjct: 427 tggcgtacaaccatcaaacgttct 404
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>dbj|AK160186.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310075M19 product:guanine nucleotide
           binding protein, alpha inhibiting 2, full insert
           sequence
          Length = 2179

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 404 gccggcagctcctcttctgagtag 427
           ||||||| ||||||||||||||||
Sbjct: 323 gccggcacctcctcttctgagtag 300
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>gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence
          Length = 136083

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    agaaaataaaacaaggcaga 69
             ||||||||||||||||||||
Sbjct: 13002 agaaaataaaacaaggcaga 12983
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       gaaaataaaacaaggcagaa 70
                ||||||||||||||||||||
Sbjct: 12464796 gaaaataaaacaaggcagaa 12464777
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>gb|AC093171.3| Homo sapiens BAC clone RP11-742A14 from 2, complete sequence
          Length = 117336

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 338   ccagtggcctctccatcttggtat 361
             ||||||||||||||||| ||||||
Sbjct: 70456 ccagtggcctctccatcatggtat 70433
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>gb|BC091137.1| Rattus norvegicus hemopexin, mRNA (cDNA clone MGC:108641
            IMAGE:7326169), complete cds
          Length = 1500

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  ccatgtcgcctgggctcctg 318
            ||||||||||||||||||||
Sbjct: 1186 ccatgtcgcctgggctcctg 1167
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>emb|AL929149.8| Mouse DNA sequence from clone RP23-93B24 on chromosome 2, complete
             sequence
          Length = 153962

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    acaaggcagaaggcttggca 79
             ||||||||||||||||||||
Sbjct: 85377 acaaggcagaaggcttggca 85396
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>emb|X68533.1|RNP618 R.norvegicus pseudogene for transfer RNA-Gln-umug (618bp)
          Length = 618

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 6  aaaaccaatccaaaaccaaa 25
          ||||||||||||||||||||
Sbjct: 66 aaaaccaatccaaaaccaaa 85
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>gb|AY610052.1| Sus scrofa clone Clu_6033.scr.msk.p1.Contig1, mRNA sequence
          Length = 1238

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 382 tggaaggtagagcttgaactcggccggcagctcctcttctgagtagag 429
           |||||| || || |||||||| || ||||| || ||||||||||||||
Sbjct: 770 tggaagatacagtttgaactctgctggcagttcgtcttctgagtagag 723
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 48      gaagaaaataaaacaaggca 67
               ||||||||||||||||||||
Sbjct: 3952675 gaagaaaataaaacaaggca 3952694
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>emb|AL731676.5| Mouse DNA sequence from clone RP23-460B8 on chromosome X, complete
             sequence
          Length = 180106

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    gaaaataaaacaaggcagaa 70
             ||||||||||||||||||||
Sbjct: 56427 gaaaataaaacaaggcagaa 56408
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>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete
              sequence
          Length = 224034

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     actgttgtcttgtagaagaa 53
              ||||||||||||||||||||
Sbjct: 154957 actgttgtcttgtagaagaa 154976
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>emb|AL805953.5| Mouse DNA sequence from clone RP23-189N21 on chromosome 2, complete
             sequence
          Length = 173345

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    agaaaataaaacaaggcaga 69
             ||||||||||||||||||||
Sbjct: 93543 agaaaataaaacaaggcaga 93562
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>gb|M62642.1|RATHMPX Rat (clone pRHx1) hemopexin mRNA, complete cds
          Length = 1516

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  ccatgtcgcctgggctcctg 318
            ||||||||||||||||||||
Sbjct: 1227 ccatgtcgcctgggctcctg 1208


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,832,545
Number of Sequences: 3902068
Number of extensions: 3832545
Number of successful extensions: 78926
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78759
Number of HSP's gapped (non-prelim): 167
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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