Clone Name | rbart29d12 |
---|---|
Clone Library Name | barley_pub |
>VTS1_YEAST (Q08831) Protein VTS1 (VTI1-2 suppressor protein 1)| Length = 523 Score = 28.9 bits (63), Expect = 5.2 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +2 Query: 35 FRSHHQHTSSRPVHNTYAFISH 100 + SHH H+ P+HNT ++ S+ Sbjct: 371 YNSHHHHSLHHPLHNTTSYFSN 392
>ATC3_YEAST (P39524) Probable phospholipid-transporting ATPase DRS2 (EC| 3.6.3.1) Length = 1355 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = -1 Query: 368 VIVGSSALVPGA-DVALESIHNIREALPELWEAGGDHVEAAVGI 240 +++G++A+ D E+IH ++EA ++W GD E A+ I Sbjct: 802 ILIGATAIEDKLQDGVPETIHTLQEAGIKIWVLTGDRQETAINI 845
>PP2CD_MOUSE (Q9QZ67) Protein phosphatase 2C isoform delta (EC 3.1.3.16)| (PP2C-delta) (p53-induced protein phosphatase 1) (Protein phosphatase magnesium-dependent 1 delta) Length = 598 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = +3 Query: 30 RISDHTISTQVVGLYITPTHSSVITMDRGSISSSTPQHMRANIV 161 RI D +T VGL PT+S+ MD+ ++ STP M+A V Sbjct: 478 RIHDSLNNTLSVGLI--PTNSTNTIMDQKNLKMSTPGQMKAQEV 519
>MEAA_METEX (Q49115) Protein meaA| Length = 688 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/53 (39%), Positives = 27/53 (50%) Frame = -1 Query: 401 IASGKSAGFHTVIVGSSALVPGADVALESIHNIREALPELWEAGGDHVEAAVG 243 +A K G H ++G S L G+ V L +RE +L EAG DHV VG Sbjct: 574 VAKAKERGAH--VIGLSVL-SGSHVPL-----VREVKAKLREAGLDHVPVVVG 618
>K0406_MOUSE (Q91V83) Protein KIAA0406 homolog| Length = 1085 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = -1 Query: 368 VIVGSSALVPGADVALESIHNIREALPELWEAGGD 264 V+VGS AL AD+ ES+H++ +LP L D Sbjct: 363 VVVGSRAL---ADILSESLHSLATSLPRLMNTQDD 394
>PGMB_BACSU (O06995) Putative beta-phosphoglucomutase (EC 5.4.2.6) (Beta-PGM)| Length = 226 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -1 Query: 419 DDSPRNIASGKSAGFHTVIVGSSALVPGADVALESIHNIR-EALPELWE 276 +D+ I++ KSAG V VG + GAD+ + ++ E L E WE Sbjct: 169 EDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLTLELLHEEWE 217
>K0406_HUMAN (O43156) Protein KIAA0406| Length = 1089 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -1 Query: 368 VIVGSSALVPGADVALESIHNIREALPELWEAGGD 264 V+VG+ AL AD+ ES+H++ +LP L + D Sbjct: 363 VVVGNKAL---ADILSESLHSLATSLPRLMNSQDD 394
>NEUR2_HUMAN (Q9Y3R4) Sialidase-2 (EC 3.2.1.18) (Cytosolic sialidase)| (N-acetyl-alpha-neuraminidase 2) Length = 380 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = +2 Query: 26 IPNFRSHHQHTSSRPVHNTYAFISHHHG-SWI--HIVEHTT 139 +P + H RP+ + + F+SH HG +W H V T Sbjct: 176 VPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDT 216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,784,663 Number of Sequences: 219361 Number of extensions: 806791 Number of successful extensions: 2557 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2442 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2513 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)